RNA–Protein interactions for RNA: ENST00000506134.5

TRIM6-208, Transcript of tripartite motif containing 6, humanhuman

TSL 2 BASIC

Gene TRIM6, Length 1,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-208ENST00000506134 CEBPZQ03701 1054 aaKnown RBP11.14□□□□□ -0.63
TRIM6-208ENST00000506134 ITGB3BPQ13352 177 aaPredicted RBP11.14□□□□□ -0.63
TRIM6-208ENST00000506134 CELF3Q5SZQ8 465 aaKnown RBP11.14□□□□□ -0.63
TRIM6-208ENST00000506134 CYFIP1Q7L576 1253 aa11.14□□□□□ -0.63
TRIM6-208ENST00000506134 DHX37Q8IY37 1157 aaKnown RBP11.14□□□□□ -0.63
TRIM6-208ENST00000506134 HAS1Q92839 578 aa11.14□□□□□ -0.63
TRIM6-208ENST00000506134 SLC5A5Q92911 643 aa11.14□□□□□ -0.63
TRIM6-208ENST00000506134 CHAMP1Q96JM3 812 aa11.14□□□□□ -0.63
TRIM6-208ENST00000506134 CDHR1Q96JP9 859 aa11.14□□□□□ -0.63
TRIM6-208ENST00000506134 SENP7Q9BQF6 1050 aa11.14□□□□□ -0.63
TRIM6-208ENST00000506134 FTOQ9C0B1 505 aaKnown RBP eCLIP11.14□□□□□ -0.63
TRIM6-208ENST00000506134 PAK6Q9NQU5 681 aaPredicted RBP11.14□□□□□ -0.63
TRIM6-208ENST00000506134 FARP1Q9Y4F1 1045 aaPredicted RBP11.14□□□□□ -0.63
TRIM6-208ENST00000506134 CLIC4Q9Y696 253 aa11.14□□□□□ -0.63
TRIM6-208ENST00000506134 C19orf67A6NJJ6 358 aa11.13□□□□□ -0.63
TRIM6-208ENST00000506134 DDX39AO00148 427 aaKnown RBP11.13□□□□□ -0.63
TRIM6-208ENST00000506134 IPO5O00410 1097 aaKnown RBP11.13□□□□□ -0.63
TRIM6-208ENST00000506134 NKRFO15226 690 aaKnown RBP eCLIP11.13□□□□□ -0.63
TRIM6-208ENST00000506134 MARCH6O60337 910 aa11.13□□□□□ -0.63
TRIM6-208ENST00000506134 NEMFO60524 1076 aa11.13□□□□□ -0.63
TRIM6-208ENST00000506134 PGK1P00558 417 aa11.13□□□□□ -0.63
TRIM6-208ENST00000506134 GH1P01241 217 aa11.13□□□□□ -0.63
TRIM6-208ENST00000506134 RARBP10826 455 aa11.13□□□□□ -0.63
TRIM6-208ENST00000506134 ARHGAP1Q07960 439 aa11.13□□□□□ -0.63
TRIM6-208ENST00000506134 PTGDRQ13258 359 aa11.13□□□□□ -0.63
TRIM6-208ENST00000506134 LAMC2Q13753 1193 aa11.13□□□□□ -0.63
TRIM6-208ENST00000506134 NEDD9Q14511 834 aa11.13□□□□□ -0.63
TRIM6-208ENST00000506134 SF3A1Q15459 793 aaKnown RBP11.13□□□□□ -0.63
TRIM6-208ENST00000506134 CALCRLQ16602 461 aa11.13□□□□□ -0.63
TRIM6-208ENST00000506134 ETNPPLQ8TBG4 499 aa11.13□□□□□ -0.63
TRIM6-208ENST00000506134 MTMR9Q96QG7 549 aa11.13□□□□□ -0.63
TRIM6-208ENST00000506134 USP28Q96RU2 1077 aa11.13□□□□□ -0.63
TRIM6-208ENST00000506134 MLXIPQ9HAP2 919 aa11.13□□□□□ -0.63
TRIM6-208ENST00000506134 KCNMB3Q9NPA1 279 aa11.13□□□□□ -0.63
TRIM6-208ENST00000506134 Q9Y3F1 56 aa11.13□□□□□ -0.63
TRIM6-208ENST00000506134 DOCK5Q9H7D0 1870 aa11.12□□□□□ -0.63
TRIM6-208ENST00000506134 MYADML2A6NDP7 307 aa11.12□□□□□ -0.63
TRIM6-208ENST00000506134 TBX3O15119 743 aa11.12□□□□□ -0.63
TRIM6-208ENST00000506134 CTAGE5O15320 804 aa11.12□□□□□ -0.63
TRIM6-208ENST00000506134 MSCO60682 206 aa11.12□□□□□ -0.63
TRIM6-208ENST00000506134 PSMD10O75832 226 aa11.12□□□□□ -0.63
TRIM6-208ENST00000506134 FARP2O94887 1054 aaPredicted RBP11.12□□□□□ -0.63
TRIM6-208ENST00000506134 BAG4O95429 457 aaKnown RBP11.12□□□□□ -0.63
TRIM6-208ENST00000506134 SGPL1O95470 568 aa11.12□□□□□ -0.63
TRIM6-208ENST00000506134 GJB1P08034 283 aa11.12□□□□□ -0.63
TRIM6-208ENST00000506134 TXKP42681 527 aa11.12□□□□□ -0.63
TRIM6-208ENST00000506134 GJA9P57773 515 aa11.12□□□□□ -0.63
TRIM6-208ENST00000506134 BEX3Q00994 111 aa11.12□□□□□ -0.63
TRIM6-208ENST00000506134 SP4Q02446 784 aa11.12□□□□□ -0.63
TRIM6-208ENST00000506134 DNM1Q05193 864 aaKnown RBP11.12□□□□□ -0.63
TRIM6-208ENST00000506134 HSDL1Q3SXM5 330 aa11.12□□□□□ -0.63
TRIM6-208ENST00000506134 TLK2Q86UE8 772 aa11.12□□□□□ -0.63
TRIM6-208ENST00000506134 GIMAP8Q8ND71 665 aaPredicted RBP11.12□□□□□ -0.63
TRIM6-208ENST00000506134 OR6J1Q8NGC5 347 aa11.12□□□□□ -0.63
TRIM6-208ENST00000506134 AFG1LQ8WV93 481 aa11.12□□□□□ -0.63
TRIM6-208ENST00000506134 FAM20AQ96MK3 541 aa11.12□□□□□ -0.63
TRIM6-208ENST00000506134 SPATA33Q96N06 139 aa11.12□□□□□ -0.63
TRIM6-208ENST00000506134 ZNF396Q96N95 335 aaPredicted RBP11.12□□□□□ -0.63
TRIM6-208ENST00000506134 SDF4Q9BRK5 362 aa11.12□□□□□ -0.63
TRIM6-208ENST00000506134 AP5M1Q9H0R1 490 aa11.12□□□□□ -0.63
TRIM6-208ENST00000506134 XPNPEP3Q9NQH7 507 aa11.12□□□□□ -0.63
TRIM6-208ENST00000506134 TBC1D22BQ9NU19 505 aa11.12□□□□□ -0.63
TRIM6-208ENST00000506134 CHMP5Q9NZZ3 219 aa11.12□□□□□ -0.63
TRIM6-208ENST00000506134 CIZ1Q9ULV3 898 aaPredicted RBP11.12□□□□□ -0.63
TRIM6-208ENST00000506134 NFASCO94856 1347 aa11.12□□□□□ -0.63
TRIM6-208ENST00000506134 SYNRGQ9UMZ2 1314 aa11.11□□□□□ -0.63
TRIM6-208ENST00000506134 GSTTP1A0A1W2PQM5 241 aa11.11□□□□□ -0.63
TRIM6-208ENST00000506134 GAS7O60861 476 aa11.11□□□□□ -0.63
TRIM6-208ENST00000506134 ADAMTS4O75173 837 aa11.11□□□□□ -0.63
TRIM6-208ENST00000506134 CCNE2O96020 404 aa11.11□□□□□ -0.63
TRIM6-208ENST00000506134 TFRCP02786 760 aaKnown RBP11.11□□□□□ -0.63
TRIM6-208ENST00000506134 OR52Z1P0C646 297 aa11.11□□□□□ -0.63
TRIM6-208ENST00000506134 C6orf222P0C671 652 aaPredicted RBP11.11□□□□□ -0.63
TRIM6-208ENST00000506134 NKX3-2P78367 333 aa11.11□□□□□ -0.63
TRIM6-208ENST00000506134 ORC2Q13416 577 aaPredicted RBP11.11□□□□□ -0.63
TRIM6-208ENST00000506134 PTPAQ15257 358 aa11.11□□□□□ -0.63
TRIM6-208ENST00000506134 IL17AQ16552 155 aa11.11□□□□□ -0.63
TRIM6-208ENST00000506134 GNASQ5JWF2 1037 aa11.11□□□□□ -0.63
TRIM6-208ENST00000506134 LRCH2Q5VUJ6 765 aa11.11□□□□□ -0.63
TRIM6-208ENST00000506134 METTL7BQ6UX53 244 aa11.11□□□□□ -0.63
TRIM6-208ENST00000506134 SLFN12Q8IYM2 578 aa11.11□□□□□ -0.63
TRIM6-208ENST00000506134 KLHDC9Q8NEP7 349 aa11.11□□□□□ -0.63
TRIM6-208ENST00000506134 U2AF1L4Q8WU68 220 aaKnown RBP11.11□□□□□ -0.63
TRIM6-208ENST00000506134 RIT2Q99578 217 aa11.11□□□□□ -0.63
TRIM6-208ENST00000506134 TMEM106CQ9BVX2 250 aa11.11□□□□□ -0.63
TRIM6-208ENST00000506134 TEKT3Q9BXF9 490 aa11.11□□□□□ -0.63
TRIM6-208ENST00000506134 CRISPLD2Q9H0B8 497 aa11.11□□□□□ -0.63
TRIM6-208ENST00000506134 UPF3AQ9H1J1 476 aaKnown RBP11.11□□□□□ -0.63
TRIM6-208ENST00000506134 SLC9A2Q9UBY0 812 aa11.11□□□□□ -0.63
TRIM6-208ENST00000506134 PCDHA12Q9UN75 941 aa11.11□□□□□ -0.63
TRIM6-208ENST00000506134 A6NJR5 290 aa11.1□□□□□ -0.63
TRIM6-208ENST00000506134 TECP42680 631 aa11.1□□□□□ -0.63
TRIM6-208ENST00000506134 ACTR2P61160 394 aa11.1□□□□□ -0.63
TRIM6-208ENST00000506134 ATP2C1P98194 919 aaPredicted RBP11.1□□□□□ -0.63
TRIM6-208ENST00000506134 LRRC41Q15345 812 aa11.1□□□□□ -0.63
TRIM6-208ENST00000506134 FSCN1Q16658 493 aaKnown RBP11.1□□□□□ -0.63
TRIM6-208ENST00000506134 EMID1Q96A84 441 aaPredicted RBP11.1□□□□□ -0.63
TRIM6-208ENST00000506134 ABHD8Q96I13 439 aa11.1□□□□□ -0.63
TRIM6-208ENST00000506134 GPR20Q99678 358 aa11.1□□□□□ -0.63
TRIM6-208ENST00000506134 UNC45AQ9H3U1 944 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms