RNA–Protein interactions for RNA: ENST00000505957.1

CPNE4-206, Transcript of copine 4, humanhuman

TSL 3

Gene CPNE4, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-206ENST00000505957 CSPP1Q1MSJ5 1256 aa12.31□□□□□ -0.44
CPNE4-206ENST00000505957 KLHL40Q2TBA0 621 aa12.31□□□□□ -0.44
CPNE4-206ENST00000505957 CCDC62Q6P9F0 684 aa12.31□□□□□ -0.44
CPNE4-206ENST00000505957 SYNE3Q6ZMZ3 975 aa12.31□□□□□ -0.44
CPNE4-206ENST00000505957 FAM184AQ8NB25 1140 aa12.31□□□□□ -0.44
CPNE4-206ENST00000505957 ANKS1AQ92625 1134 aa12.31□□□□□ -0.44
CPNE4-206ENST00000505957 COPS5Q92905 334 aa12.31□□□□□ -0.44
CPNE4-206ENST00000505957 CTAGE1Q96RT6 745 aa12.31□□□□□ -0.44
CPNE4-206ENST00000505957 ZSCAN10Q96SZ4 725 aaPredicted RBP12.31□□□□□ -0.44
CPNE4-206ENST00000505957 ZSCAN16Q9H4T2 348 aaPredicted RBP12.31□□□□□ -0.44
CPNE4-206ENST00000505957 GPCPD1Q9NPB8 672 aa12.31□□□□□ -0.44
CPNE4-206ENST00000505957 LMBRD1Q9NUN5 540 aa12.31□□□□□ -0.44
CPNE4-206ENST00000505957 SLC12A7Q9Y666 1083 aa12.31□□□□□ -0.44
CPNE4-206ENST00000505957 XIRP2A4UGR9 3374 aa12.31□□□□□ -0.44
CPNE4-206ENST00000505957 FRMPD2Q68DX3 1309 aaPredicted RBP12.31□□□□□ -0.44
CPNE4-206ENST00000505957 TRANK1O15050 2925 aa12.31□□□□□ -0.44
CPNE4-206ENST00000505957 CCDC196A0A1B0GTZ2 297 aa12.3□□□□□ -0.44
CPNE4-206ENST00000505957 GOLGA8AA7E2F4 631 aa12.3□□□□□ -0.44
CPNE4-206ENST00000505957 PI4K2BG5E9Z4 385 aa12.3□□□□□ -0.44
CPNE4-206ENST00000505957 CPLX1O14810 134 aa12.3□□□□□ -0.44
CPNE4-206ENST00000505957 EFCAB14O75071 495 aa12.3□□□□□ -0.44
CPNE4-206ENST00000505957 DDAH1O94760 285 aa12.3□□□□□ -0.44
CPNE4-206ENST00000505957 ARIH2O95376 493 aa12.3□□□□□ -0.44
CPNE4-206ENST00000505957 SELPP16109 830 aa12.3□□□□□ -0.44
CPNE4-206ENST00000505957 ZNF543Q08ER8 600 aa12.3□□□□□ -0.44
CPNE4-206ENST00000505957 GPNMBQ14956 572 aa12.3□□□□□ -0.44
CPNE4-206ENST00000505957 NTRK3Q16288 839 aa12.3□□□□□ -0.44
CPNE4-206ENST00000505957 RRP12Q5JTH9 1297 aaKnown RBP12.3□□□□□ -0.44
CPNE4-206ENST00000505957 MCTP1Q6DN14 999 aa12.3□□□□□ -0.44
CPNE4-206ENST00000505957 CNKSR3Q6P9H4 555 aa12.3□□□□□ -0.44
CPNE4-206ENST00000505957 ENAHQ8N8S7 591 aaPredicted RBP12.3□□□□□ -0.44
CPNE4-206ENST00000505957 MAP3K14Q99558 947 aa12.3□□□□□ -0.44
CPNE4-206ENST00000505957 NCOA5Q9HCD5 579 aaKnown RBP12.3□□□□□ -0.44
CPNE4-206ENST00000505957 TOMM22Q9NS69 142 aa12.3□□□□□ -0.44
CPNE4-206ENST00000505957 FAM217BQ9NTX9 383 aaPredicted RBP12.3□□□□□ -0.44
CPNE4-206ENST00000505957 SCN5AQ14524 2016 aa12.3□□□□□ -0.44
CPNE4-206ENST00000505957 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.29□□□□□ -0.44
CPNE4-206ENST00000505957 ABHD14A-ACY1A0A1B0GW23 586 aa12.29□□□□□ -0.44
CPNE4-206ENST00000505957 LCHNA4D1U4 455 aa12.29□□□□□ -0.44
CPNE4-206ENST00000505957 VPS37CA5D8V6 355 aaPredicted RBP12.29□□□□□ -0.44
CPNE4-206ENST00000505957 GJB5O95377 273 aa12.29□□□□□ -0.44
CPNE4-206ENST00000505957 MBD3O95983 291 aa12.29□□□□□ -0.44
CPNE4-206ENST00000505957 GH1P01241 217 aa12.29□□□□□ -0.44
CPNE4-206ENST00000505957 MMP3P08254 477 aa12.29□□□□□ -0.44
CPNE4-206ENST00000505957 CALM1P0DP23 149 aa12.29□□□□□ -0.44
CPNE4-206ENST00000505957 CALM2P0DP24 149 aa12.29□□□□□ -0.44
CPNE4-206ENST00000505957 CALM3P0DP25 149 aa12.29□□□□□ -0.44
CPNE4-206ENST00000505957 FDPSP14324 419 aaKnown RBP12.29□□□□□ -0.44
CPNE4-206ENST00000505957 IFNAR1P17181 557 aa12.29□□□□□ -0.44
CPNE4-206ENST00000505957 ERVK-21P61565 698 aa12.29□□□□□ -0.44
CPNE4-206ENST00000505957 RESTQ13127 1097 aa12.29□□□□□ -0.44
CPNE4-206ENST00000505957 GPATCH4Q5T3I0 446 aaKnown RBP12.29□□□□□ -0.44
CPNE4-206ENST00000505957 ATL3Q6DD88 541 aa12.29□□□□□ -0.44
CPNE4-206ENST00000505957 GDF6Q6KF10 455 aaPredicted RBP12.29□□□□□ -0.44
CPNE4-206ENST00000505957 NFXL1Q6ZNB6 911 aa12.29□□□□□ -0.44
CPNE4-206ENST00000505957 LRRC8DQ7L1W4 858 aa12.29□□□□□ -0.44
CPNE4-206ENST00000505957 SPRED2Q7Z698 418 aa12.29□□□□□ -0.44
CPNE4-206ENST00000505957 ZNF654Q8IZM8 581 aa12.29□□□□□ -0.44
CPNE4-206ENST00000505957 PPP1R13LQ8WUF5 828 aa12.29□□□□□ -0.44
CPNE4-206ENST00000505957 AFG1LQ8WV93 481 aa12.29□□□□□ -0.44
CPNE4-206ENST00000505957 KAT2BQ92831 832 aa12.29□□□□□ -0.44
CPNE4-206ENST00000505957 RAD9AQ99638 391 aa12.29□□□□□ -0.44
CPNE4-206ENST00000505957 ZBED2Q9BTP6 218 aa12.29□□□□□ -0.44
CPNE4-206ENST00000505957 SENP2Q9HC62 589 aa12.29□□□□□ -0.44
CPNE4-206ENST00000505957 C11orf16Q9NQ32 467 aa12.29□□□□□ -0.44
CPNE4-206ENST00000505957 TANC1Q9C0D5 1861 aa12.28□□□□□ -0.44
CPNE4-206ENST00000505957 ARHGAP1Q07960 439 aa12.28□□□□□ -0.44
CPNE4-206ENST00000505957 RTN1Q16799 776 aa12.28□□□□□ -0.44
CPNE4-206ENST00000505957 IFIT1BQ5T764 474 aaKnown RBP12.28□□□□□ -0.44
CPNE4-206ENST00000505957 MICU3Q86XE3 530 aa12.28□□□□□ -0.44
CPNE4-206ENST00000505957 DGKHQ86XP1 1220 aa12.28□□□□□ -0.44
CPNE4-206ENST00000505957 DHX38Q92620 1227 aaKnown RBP12.28□□□□□ -0.44
CPNE4-206ENST00000505957 KHSRPQ92945 711 aaKnown RBP eCLIP12.28□□□□□ -0.44
CPNE4-206ENST00000505957 EMID1Q96A84 441 aaPredicted RBP12.28□□□□□ -0.44
CPNE4-206ENST00000505957 TGS1Q96RS0 853 aaKnown RBP12.28□□□□□ -0.44
CPNE4-206ENST00000505957 IWS1Q96ST2 819 aa12.28□□□□□ -0.44
CPNE4-206ENST00000505957 SUGCTQ9HAC7 445 aa12.28□□□□□ -0.44
CPNE4-206ENST00000505957 RBM28Q9NW13 759 aaKnown RBP12.28□□□□□ -0.44
CPNE4-206ENST00000505957 ORC3Q9UBD5 711 aaPredicted RBP12.28□□□□□ -0.44
CPNE4-206ENST00000505957 GTF2IRD1Q9UHL9 959 aa12.28□□□□□ -0.44
CPNE4-206ENST00000505957 NAP1L2Q9ULW6 460 aaPredicted RBP12.28□□□□□ -0.44
CPNE4-206ENST00000505957 TET1Q8NFU7 2136 aa12.28□□□□□ -0.44
CPNE4-206ENST00000505957 H3BQV1 296 aa12.27□□□□□ -0.45
CPNE4-206ENST00000505957 NBNO60934 754 aa12.27□□□□□ -0.45
CPNE4-206ENST00000505957 CKBP12277 381 aa12.27□□□□□ -0.45
CPNE4-206ENST00000505957 CDC27P30260 824 aa12.27□□□□□ -0.45
CPNE4-206ENST00000505957 KRT85P78386 507 aa12.27□□□□□ -0.45
CPNE4-206ENST00000505957 DEFB103AP81534 67 aa12.27□□□□□ -0.45
CPNE4-206ENST00000505957 TROAPQ12815 778 aa12.27□□□□□ -0.45
CPNE4-206ENST00000505957 STXBP2Q15833 593 aa12.27□□□□□ -0.45
CPNE4-206ENST00000505957 DGKDQ16760 1214 aa12.27□□□□□ -0.45
CPNE4-206ENST00000505957 LY6KQ17RY6 165 aa12.27□□□□□ -0.45
CPNE4-206ENST00000505957 LEXMQ3ZCV2 418 aa12.27□□□□□ -0.45
CPNE4-206ENST00000505957 FBXO18Q8NFZ0 1043 aa12.27□□□□□ -0.45
CPNE4-206ENST00000505957 NSUN6Q8TEA1 469 aaKnown RBP12.27□□□□□ -0.45
CPNE4-206ENST00000505957 GDPD5Q8WTR4 605 aa12.27□□□□□ -0.45
CPNE4-206ENST00000505957 WASF1Q92558 559 aa12.27□□□□□ -0.45
CPNE4-206ENST00000505957 KATNAL1Q9BW62 490 aa12.27□□□□□ -0.45
CPNE4-206ENST00000505957 UBE2ZQ9H832 354 aaPredicted RBP12.27□□□□□ -0.45
CPNE4-206ENST00000505957 REV3LO60673 3130 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms