RNA–Protein interactions for RNA: ENST00000505881.5

CPNE4-205, Transcript of copine 4, humanhuman

TSL 4

Gene CPNE4, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-205ENST00000505881 RGS3P49796 1198 aa5.71□□□□□ -1.5
CPNE4-205ENST00000505881 RACK1P63244 317 aaKnown RBP5.71□□□□□ -1.5
CPNE4-205ENST00000505881 SATB1Q01826 763 aa5.71□□□□□ -1.5
CPNE4-205ENST00000505881 SP3Q02447 781 aa5.71□□□□□ -1.5
CPNE4-205ENST00000505881 SLC20A2Q08357 652 aa5.71□□□□□ -1.5
CPNE4-205ENST00000505881 UBE4AQ14139 1066 aa5.71□□□□□ -1.5
CPNE4-205ENST00000505881 MAPRE1Q15691 268 aaKnown RBP5.71□□□□□ -1.5
CPNE4-205ENST00000505881 PLA2G4EQ3MJ16 856 aa5.71□□□□□ -1.5
CPNE4-205ENST00000505881 SNAP47Q5SQN1 464 aa5.71□□□□□ -1.5
CPNE4-205ENST00000505881 PRAMEF18Q5VWM3 479 aa5.71□□□□□ -1.5
CPNE4-205ENST00000505881 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.71□□□□□ -1.5
CPNE4-205ENST00000505881 ZSCAN30Q86W11 494 aa5.71□□□□□ -1.5
CPNE4-205ENST00000505881 DZIP1LQ8IYY4 767 aaKnown RBP5.71□□□□□ -1.5
CPNE4-205ENST00000505881 RPUSD2Q8IZ73 545 aaKnown RBP5.71□□□□□ -1.5
CPNE4-205ENST00000505881 MEGF10Q96KG7 1140 aa5.71□□□□□ -1.5
CPNE4-205ENST00000505881 NEUROD6Q96NK8 337 aa5.71□□□□□ -1.5
CPNE4-205ENST00000505881 GDF15Q99988 308 aa5.71□□□□□ -1.5
CPNE4-205ENST00000505881 TGIF2Q9GZN2 237 aa5.71□□□□□ -1.5
CPNE4-205ENST00000505881 CASS4Q9NQ75 786 aa5.71□□□□□ -1.5
CPNE4-205ENST00000505881 PCDHA4Q9UN74 947 aa5.71□□□□□ -1.5
CPNE4-205ENST00000505881 AP4E1Q9UPM8 1137 aa5.71□□□□□ -1.5
CPNE4-205ENST00000505881 YDJCA8MPS7 323 aa5.7□□□□□ -1.5
CPNE4-205ENST00000505881 IGF2BP3O00425 579 aaKnown RBP eCLIP5.7□□□□□ -1.5
CPNE4-205ENST00000505881 PSMD14O00487 310 aa5.7□□□□□ -1.5
CPNE4-205ENST00000505881 HMMRO75330 724 aa5.7□□□□□ -1.5
CPNE4-205ENST00000505881 STARD3NLO95772 234 aa5.7□□□□□ -1.5
CPNE4-205ENST00000505881 F13A1P00488 732 aa5.7□□□□□ -1.5
CPNE4-205ENST00000505881 SLFN14P0C7P3 912 aa5.7□□□□□ -1.5
CPNE4-205ENST00000505881 TNNT2P45379 298 aaPredicted RBP5.7□□□□□ -1.5
CPNE4-205ENST00000505881 ID3Q02535 119 aa5.7□□□□□ -1.5
CPNE4-205ENST00000505881 SOX4Q06945 474 aaPredicted RBP5.7□□□□□ -1.5
CPNE4-205ENST00000505881 CRHR2Q13324 411 aa5.7□□□□□ -1.5
CPNE4-205ENST00000505881 TCIRG1Q13488 830 aa5.7□□□□□ -1.5
CPNE4-205ENST00000505881 KCTD2Q14681 263 aa5.7□□□□□ -1.5
CPNE4-205ENST00000505881 L1TD1Q5T7N2 865 aaKnown RBP5.7□□□□□ -1.5
CPNE4-205ENST00000505881 ANGEL2Q5VTE6 544 aaKnown RBP5.7□□□□□ -1.5
CPNE4-205ENST00000505881 FBXL19Q6PCT2 694 aa5.7□□□□□ -1.5
CPNE4-205ENST00000505881 BNC2Q6ZN30 1099 aaPredicted RBP5.7□□□□□ -1.5
CPNE4-205ENST00000505881 UBE2Q1Q7Z7E8 422 aa5.7□□□□□ -1.5
CPNE4-205ENST00000505881 KIAA0825Q8IV33 1275 aa5.7□□□□□ -1.5
CPNE4-205ENST00000505881 TDHQ8IZJ6 230 aa5.7□□□□□ -1.5
CPNE4-205ENST00000505881 ZNF654Q8IZM8 581 aa5.7□□□□□ -1.5
CPNE4-205ENST00000505881 GOLM1Q8NBJ4 401 aa5.7□□□□□ -1.5
CPNE4-205ENST00000505881 DHX38Q92620 1227 aaKnown RBP5.7□□□□□ -1.5
CPNE4-205ENST00000505881 DPF2Q92785 391 aa5.7□□□□□ -1.5
CPNE4-205ENST00000505881 RPGRQ92834 1020 aaKnown RBP5.7□□□□□ -1.5
CPNE4-205ENST00000505881 ITFG2Q969R8 447 aa5.7□□□□□ -1.5
CPNE4-205ENST00000505881 RUNDC1Q96C34 613 aa5.7□□□□□ -1.5
CPNE4-205ENST00000505881 FAM210AQ96ND0 272 aa5.7□□□□□ -1.5
CPNE4-205ENST00000505881 UBL7Q96S82 380 aaPredicted RBP5.7□□□□□ -1.5
CPNE4-205ENST00000505881 PAIP2Q9BPZ3 127 aaKnown RBP5.7□□□□□ -1.5
CPNE4-205ENST00000505881 SSBP4Q9BWG4 385 aaPredicted RBP5.7□□□□□ -1.5
CPNE4-205ENST00000505881 VPS33BQ9H267 617 aa5.7□□□□□ -1.5
CPNE4-205ENST00000505881 DDX56Q9NY93 547 aaKnown RBP5.7□□□□□ -1.5
CPNE4-205ENST00000505881 ANAPC4Q9UJX5 808 aa5.7□□□□□ -1.5
CPNE4-205ENST00000505881 PPP1R9AQ9ULJ8 1098 aa5.7□□□□□ -1.5
CPNE4-205ENST00000505881 ZMYND8Q9ULU4 1186 aaPredicted RBP5.7□□□□□ -1.5
CPNE4-205ENST00000505881 NOL7Q9UMY1 257 aaKnown RBP5.7□□□□□ -1.5
CPNE4-205ENST00000505881 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.7□□□□□ -1.5
CPNE4-205ENST00000505881 SUPT16HQ9Y5B9 1047 aaKnown RBP5.7□□□□□ -1.5
CPNE4-205ENST00000505881 MYO9BQ13459 2157 aa5.7□□□□□ -1.5
CPNE4-205ENST00000505881 ROCK2O75116 1388 aaKnown RBP5.69□□□□□ -1.5
CPNE4-205ENST00000505881 FAM221AA4D161 298 aa5.69□□□□□ -1.5
CPNE4-205ENST00000505881 GREM1O60565 184 aa5.69□□□□□ -1.5
CPNE4-205ENST00000505881 FARP2O94887 1054 aaPredicted RBP5.69□□□□□ -1.5
CPNE4-205ENST00000505881 A1BGP04217 495 aa5.69□□□□□ -1.5
CPNE4-205ENST00000505881 LDHCP07864 332 aa5.69□□□□□ -1.5
CPNE4-205ENST00000505881 VIL1P09327 827 aaKnown RBP5.69□□□□□ -1.5
CPNE4-205ENST00000505881 DRD2P14416 443 aa5.69□□□□□ -1.5
CPNE4-205ENST00000505881 HSD3B2P26439 372 aa5.69□□□□□ -1.5
CPNE4-205ENST00000505881 IL6STP40189 918 aaPredicted RBP5.69□□□□□ -1.5
CPNE4-205ENST00000505881 GATA4P43694 442 aa5.69□□□□□ -1.5
CPNE4-205ENST00000505881 PRKG1Q13976 671 aa5.69□□□□□ -1.5
CPNE4-205ENST00000505881 EIF4A2Q14240 407 aaKnown RBP5.69□□□□□ -1.5
CPNE4-205ENST00000505881 BMS1Q14692 1282 aaKnown RBP5.69□□□□□ -1.5
CPNE4-205ENST00000505881 AMOTQ4VCS5 1084 aa5.69□□□□□ -1.5
CPNE4-205ENST00000505881 ZC3H12AQ5D1E8 599 aaKnown RBP5.69□□□□□ -1.5
CPNE4-205ENST00000505881 WIPI1Q5MNZ9 446 aaPredicted RBP5.69□□□□□ -1.5
CPNE4-205ENST00000505881 LRFN4Q6PJG9 635 aa5.69□□□□□ -1.5
CPNE4-205ENST00000505881 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.69□□□□□ -1.5
CPNE4-205ENST00000505881 ANKRD13BQ86YJ7 626 aa5.69□□□□□ -1.5
CPNE4-205ENST00000505881 C12orf50Q8NA57 414 aaPredicted RBP5.69□□□□□ -1.5
CPNE4-205ENST00000505881 C2CD4AQ8NCU7 369 aaPredicted RBP5.69□□□□□ -1.5
CPNE4-205ENST00000505881 SUPT20HQ8NEM7 779 aa5.69□□□□□ -1.5
CPNE4-205ENST00000505881 STAG1Q8WVM7 1258 aa5.69□□□□□ -1.5
CPNE4-205ENST00000505881 GATAD2BQ8WXI9 593 aa5.69□□□□□ -1.5
CPNE4-205ENST00000505881 JARID2Q92833 1246 aaPredicted RBP5.69□□□□□ -1.5
CPNE4-205ENST00000505881 FAM46AQ96IP4 442 aaKnown RBP5.69□□□□□ -1.5
CPNE4-205ENST00000505881 CDX2Q99626 313 aaPredicted RBP5.69□□□□□ -1.5
CPNE4-205ENST00000505881 SPON2Q9BUD6 331 aa5.69□□□□□ -1.5
CPNE4-205ENST00000505881 ZHX3Q9H4I2 956 aa5.69□□□□□ -1.5
CPNE4-205ENST00000505881 RETREG1Q9H6L5 497 aa5.69□□□□□ -1.5
CPNE4-205ENST00000505881 CCSER2Q9H7U1 834 aa5.69□□□□□ -1.5
CPNE4-205ENST00000505881 SLC52A2Q9HAB3 445 aa5.69□□□□□ -1.5
CPNE4-205ENST00000505881 LGR6Q9HBX8 967 aa5.69□□□□□ -1.5
CPNE4-205ENST00000505881 CRIM1Q9NZV1 1036 aa5.69□□□□□ -1.5
CPNE4-205ENST00000505881 NIP7Q9Y221 180 aaKnown RBP eCLIP5.69□□□□□ -1.5
CPNE4-205ENST00000505881 LAMB1P07942 1786 aa5.69□□□□□ -1.5
CPNE4-205ENST00000505881 MANSC4A6NHS7 340 aaPredicted RBP5.68□□□□□ -1.5
CPNE4-205ENST00000505881 IPO8O15397 1037 aaKnown RBP5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms