RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 CT47B1P0C2W7 299 aaPredicted RBP5.05□□□□□ -1.6
TRAPPC13-208ENST00000505553 ZSCAN20P17040 1043 aaPredicted RBP5.05□□□□□ -1.6
TRAPPC13-208ENST00000505553 NOP2P46087 812 aaKnown RBP5.05□□□□□ -1.6
TRAPPC13-208ENST00000505553 ERVFC1P60507 584 aa5.05□□□□□ -1.6
TRAPPC13-208ENST00000505553 GPR85P60893 370 aa5.05□□□□□ -1.6
TRAPPC13-208ENST00000505553 SCRN1Q12765 414 aa5.05□□□□□ -1.6
TRAPPC13-208ENST00000505553 PRSS53Q2L4Q9 553 aa5.05□□□□□ -1.6
TRAPPC13-208ENST00000505553 ACBD5Q5T8D3 534 aaPredicted RBP5.05□□□□□ -1.6
TRAPPC13-208ENST00000505553 CXorf57Q6NSI4 855 aaKnown RBP5.05□□□□□ -1.6
TRAPPC13-208ENST00000505553 ZC3H7AQ8IWR0 971 aaKnown RBP5.05□□□□□ -1.6
TRAPPC13-208ENST00000505553 SP8Q8IXZ3 490 aa5.05□□□□□ -1.6
TRAPPC13-208ENST00000505553 LILRA2Q8N149 483 aa5.05□□□□□ -1.6
TRAPPC13-208ENST00000505553 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.05□□□□□ -1.6
TRAPPC13-208ENST00000505553 COG1Q8WTW3 980 aa5.05□□□□□ -1.6
TRAPPC13-208ENST00000505553 TEPSINQ96N21 525 aa5.05□□□□□ -1.6
TRAPPC13-208ENST00000505553 TRIM8Q9BZR9 551 aa5.05□□□□□ -1.6
TRAPPC13-208ENST00000505553 RNF32Q9H0A6 362 aa5.05□□□□□ -1.6
TRAPPC13-208ENST00000505553 ZNF700Q9H0M5 742 aa5.05□□□□□ -1.6
TRAPPC13-208ENST00000505553 LUC7LQ9NQ29 371 aaKnown RBP5.05□□□□□ -1.6
TRAPPC13-208ENST00000505553 GPR27Q9NS67 375 aa5.05□□□□□ -1.6
TRAPPC13-208ENST00000505553 CHST7Q9NS84 486 aa5.05□□□□□ -1.6
TRAPPC13-208ENST00000505553 GPATCH2Q9NW75 528 aa5.05□□□□□ -1.6
TRAPPC13-208ENST00000505553 ASXL2Q76L83 1435 aa5.04□□□□□ -1.6
TRAPPC13-208ENST00000505553 K7ESF4 209 aa5.04□□□□□ -1.6
TRAPPC13-208ENST00000505553 MEFVO15553 781 aaPredicted RBP5.04□□□□□ -1.6
TRAPPC13-208ENST00000505553 SIGLEC6O43699 453 aa5.04□□□□□ -1.6
TRAPPC13-208ENST00000505553 FKBP9O95302 570 aa5.04□□□□□ -1.6
TRAPPC13-208ENST00000505553 ESR1P03372 595 aa5.04□□□□□ -1.6
TRAPPC13-208ENST00000505553 GSNP06396 782 aa5.04□□□□□ -1.6
TRAPPC13-208ENST00000505553 KCNA6P17658 529 aa5.04□□□□□ -1.6
TRAPPC13-208ENST00000505553 CCND1P24385 295 aa5.04□□□□□ -1.6
TRAPPC13-208ENST00000505553 TPP2P29144 1249 aaPredicted RBP5.04□□□□□ -1.6
TRAPPC13-208ENST00000505553 ID4P47928 161 aa5.04□□□□□ -1.6
TRAPPC13-208ENST00000505553 LSSP48449 732 aa5.04□□□□□ -1.6
TRAPPC13-208ENST00000505553 DSG1Q02413 1049 aa5.04□□□□□ -1.6
TRAPPC13-208ENST00000505553 DPY19L1Q2PZI1 675 aa5.04□□□□□ -1.6
TRAPPC13-208ENST00000505553 ATP13A4Q4VNC1 1196 aa5.04□□□□□ -1.6
TRAPPC13-208ENST00000505553 RALGPS1Q5JS13 557 aa5.04□□□□□ -1.6
TRAPPC13-208ENST00000505553 E4F1Q66K89 784 aaPredicted RBP5.04□□□□□ -1.6
TRAPPC13-208ENST00000505553 SLC4A10Q6U841 1118 aa5.04□□□□□ -1.6
TRAPPC13-208ENST00000505553 KCNT2Q6UVM3 1135 aa5.04□□□□□ -1.6
TRAPPC13-208ENST00000505553 FKBP9P1Q75LS8 142 aa5.04□□□□□ -1.6
TRAPPC13-208ENST00000505553 PPIL6Q8IXY8 311 aa5.04□□□□□ -1.6
TRAPPC13-208ENST00000505553 MAGEB6Q8N7X4 407 aa5.04□□□□□ -1.6
TRAPPC13-208ENST00000505553 KREMEN2Q8NCW0 462 aa5.04□□□□□ -1.6
TRAPPC13-208ENST00000505553 SMC1BQ8NDV3 1235 aa5.04□□□□□ -1.6
TRAPPC13-208ENST00000505553 JPH3Q8WXH2 748 aaPredicted RBP5.04□□□□□ -1.6
TRAPPC13-208ENST00000505553 COPS5Q92905 334 aa5.04□□□□□ -1.6
TRAPPC13-208ENST00000505553 SCYL1Q96KG9 808 aa5.04□□□□□ -1.6
TRAPPC13-208ENST00000505553 GPR20Q99678 358 aa5.04□□□□□ -1.6
TRAPPC13-208ENST00000505553 ALG1Q9BT22 464 aa5.04□□□□□ -1.6
TRAPPC13-208ENST00000505553 PHF20Q9BVI0 1012 aa5.04□□□□□ -1.6
TRAPPC13-208ENST00000505553 RTFDC1Q9BY42 306 aaPredicted RBP5.04□□□□□ -1.6
TRAPPC13-208ENST00000505553 NOB1Q9ULX3 412 aaKnown RBP5.04□□□□□ -1.6
TRAPPC13-208ENST00000505553 PCDHA8Q9Y5H6 950 aa5.04□□□□□ -1.6
TRAPPC13-208ENST00000505553 TNKSO95271 1327 aa5.04□□□□□ -1.6
TRAPPC13-208ENST00000505553 M0R2C6 588 aa5.03□□□□□ -1.6
TRAPPC13-208ENST00000505553 ARVCFO00192 962 aa5.03□□□□□ -1.6
TRAPPC13-208ENST00000505553 GSTA4O15217 222 aa5.03□□□□□ -1.6
TRAPPC13-208ENST00000505553 GLRX3O76003 335 aaKnown RBP5.03□□□□□ -1.6
TRAPPC13-208ENST00000505553 PRKD3O94806 890 aa5.03□□□□□ -1.6
TRAPPC13-208ENST00000505553 ABLIM3O94929 683 aa5.03□□□□□ -1.6
TRAPPC13-208ENST00000505553 SNUPNO95149 360 aaKnown RBP5.03□□□□□ -1.6
TRAPPC13-208ENST00000505553 ADCYAP1R1P41586 468 aa5.03□□□□□ -1.6
TRAPPC13-208ENST00000505553 PLP2Q04941 152 aa5.03□□□□□ -1.6
TRAPPC13-208ENST00000505553 PAK1Q13153 545 aa5.03□□□□□ -1.6
TRAPPC13-208ENST00000505553 SNW1Q13573 536 aaKnown RBP5.03□□□□□ -1.6
TRAPPC13-208ENST00000505553 TESK1Q15569 626 aa5.03□□□□□ -1.6
TRAPPC13-208ENST00000505553 VPS72Q15906 364 aa5.03□□□□□ -1.6
TRAPPC13-208ENST00000505553 PTPN21Q16825 1174 aa5.03□□□□□ -1.6
TRAPPC13-208ENST00000505553 LONRF3Q496Y0 759 aa5.03□□□□□ -1.6
TRAPPC13-208ENST00000505553 FAM47CQ5HY64 1035 aa5.03□□□□□ -1.6
TRAPPC13-208ENST00000505553 IQCEQ6IPM2 695 aa5.03□□□□□ -1.6
TRAPPC13-208ENST00000505553 NXPE1Q8N323 547 aa5.03□□□□□ -1.6
TRAPPC13-208ENST00000505553 IGSF22Q8N9C0 903 aa5.03□□□□□ -1.6
TRAPPC13-208ENST00000505553 ENOX1Q8TC92 643 aaKnown RBP5.03□□□□□ -1.6
TRAPPC13-208ENST00000505553 PANK1Q8TE04 598 aa5.03□□□□□ -1.6
TRAPPC13-208ENST00000505553 FBXO41Q8TF61 875 aa5.03□□□□□ -1.6
TRAPPC13-208ENST00000505553 SYTL4Q96C24 671 aaPredicted RBP5.03□□□□□ -1.6
TRAPPC13-208ENST00000505553 MPHOSPH6Q99547 160 aaKnown RBP5.03□□□□□ -1.6
TRAPPC13-208ENST00000505553 SLC13A1Q9BZW2 595 aa5.03□□□□□ -1.6
TRAPPC13-208ENST00000505553 ADAMTS10Q9H324 1103 aa5.03□□□□□ -1.6
TRAPPC13-208ENST00000505553 CRTAC1Q9NQ79 661 aa5.03□□□□□ -1.6
TRAPPC13-208ENST00000505553 NPFFR2Q9Y5X5 522 aa5.03□□□□□ -1.6
TRAPPC13-208ENST00000505553 BACE2Q9Y5Z0 518 aa5.03□□□□□ -1.6
TRAPPC13-208ENST00000505553 C2orf71A6NGG8 1288 aa5.02□□□□□ -1.61
TRAPPC13-208ENST00000505553 ZNF891A8MT65 544 aaPredicted RBP5.02□□□□□ -1.61
TRAPPC13-208ENST00000505553 H0Y8X5 98 aa5.02□□□□□ -1.61
TRAPPC13-208ENST00000505553 THBDP07204 575 aa5.02□□□□□ -1.61
TRAPPC13-208ENST00000505553 LTBRP36941 435 aa5.02□□□□□ -1.61
TRAPPC13-208ENST00000505553 KPNA1P52294 538 aaPredicted RBP5.02□□□□□ -1.61
TRAPPC13-208ENST00000505553 NMIQ13287 307 aaPredicted RBP5.02□□□□□ -1.61
TRAPPC13-208ENST00000505553 KCNAB2Q13303 367 aa5.02□□□□□ -1.61
TRAPPC13-208ENST00000505553 SAFB2Q14151 953 aaKnown RBP eCLIP5.02□□□□□ -1.61
TRAPPC13-208ENST00000505553 WASHC2AQ641Q2 1341 aa5.02□□□□□ -1.61
TRAPPC13-208ENST00000505553 DENND5AQ6IQ26 1287 aa5.02□□□□□ -1.61
TRAPPC13-208ENST00000505553 ABHD17CQ6PCB6 329 aa5.02□□□□□ -1.61
TRAPPC13-208ENST00000505553 KSR2Q6VAB6 950 aa5.02□□□□□ -1.61
TRAPPC13-208ENST00000505553 TSHZ1Q6ZSZ6 1077 aa5.02□□□□□ -1.61
TRAPPC13-208ENST00000505553 DGKHQ86XP1 1220 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms