RNA–Protein interactions for RNA: ENST00000505397.1

LIN54-204, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIN54, Length 2,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-204ENST00000505397 SLC1A4P43007 532 aa18.78■□□□□ 0.6
LIN54-204ENST00000505397 PDIA5Q14554 519 aa18.78■□□□□ 0.6
LIN54-204ENST00000505397 SHROOM1Q2M3G4 852 aaPredicted RBP18.78■□□□□ 0.6
LIN54-204ENST00000505397 ZNF572Q7Z3I7 529 aaPredicted RBP18.78■□□□□ 0.6
LIN54-204ENST00000505397 DCAF4Q8WV16 495 aa18.78■□□□□ 0.6
LIN54-204ENST00000505397 SECISBP2LQ93073 1101 aaKnown RBP18.78■□□□□ 0.6
LIN54-204ENST00000505397 CCDC42Q96M95 316 aa18.78■□□□□ 0.6
LIN54-204ENST00000505397 PCMTD1Q96MG8 357 aaPredicted RBP18.78■□□□□ 0.6
LIN54-204ENST00000505397 LRWD1Q9UFC0 647 aa18.78■□□□□ 0.6
LIN54-204ENST00000505397 BCS1LQ9Y276 419 aa18.78■□□□□ 0.6
LIN54-204ENST00000505397 RPS6KA5O75582 802 aa18.77■□□□□ 0.6
LIN54-204ENST00000505397 CALCRLQ16602 461 aa18.77■□□□□ 0.6
LIN54-204ENST00000505397 MAP9Q49MG5 647 aa18.77■□□□□ 0.6
LIN54-204ENST00000505397 SLFN13Q68D06 897 aa18.77■□□□□ 0.6
LIN54-204ENST00000505397 LARP4BQ92615 738 aaKnown RBP18.77■□□□□ 0.6
LIN54-204ENST00000505397 CAPZA3Q96KX2 299 aa18.77■□□□□ 0.6
LIN54-204ENST00000505397 JMJD4Q9H9V9 463 aa18.77■□□□□ 0.6
LIN54-204ENST00000505397 PNMA6FA0A0J9YX94 578 aa18.77■□□□□ 0.59
LIN54-204ENST00000505397 EPHB6O15197 1021 aa18.77■□□□□ 0.59
LIN54-204ENST00000505397 PLEKP08567 350 aaPredicted RBP18.77■□□□□ 0.59
LIN54-204ENST00000505397 PRLRP16471 622 aa18.77■□□□□ 0.59
LIN54-204ENST00000505397 MAN2A1Q16706 1144 aa18.77■□□□□ 0.59
LIN54-204ENST00000505397 TTBK2Q6IQ55 1244 aa18.77■□□□□ 0.59
LIN54-204ENST00000505397 TRIM58Q8NG06 486 aa18.77■□□□□ 0.59
LIN54-204ENST00000505397 JRKLQ9Y4A0 524 aa18.77■□□□□ 0.59
LIN54-204ENST00000505397 CD2APQ9Y5K6 639 aa18.77■□□□□ 0.59
LIN54-204ENST00000505397 ZNF185O15231 689 aa18.76■□□□□ 0.59
LIN54-204ENST00000505397 SLC37A4O43826 429 aa18.76■□□□□ 0.59
LIN54-204ENST00000505397 SYF2O95926 243 aaKnown RBP18.76■□□□□ 0.59
LIN54-204ENST00000505397 GH2P01242 217 aa18.76■□□□□ 0.59
LIN54-204ENST00000505397 IDEP14735 1019 aa18.76■□□□□ 0.59
LIN54-204ENST00000505397 ADCY7P51828 1080 aa18.76■□□□□ 0.59
LIN54-204ENST00000505397 LRRC63Q05C16 580 aa18.76■□□□□ 0.59
LIN54-204ENST00000505397 ITIH3Q06033 890 aa18.76■□□□□ 0.59
LIN54-204ENST00000505397 TNIP1Q15025 636 aa18.76■□□□□ 0.59
LIN54-204ENST00000505397 SPA17Q15506 151 aa18.76■□□□□ 0.59
LIN54-204ENST00000505397 HSP90B2PQ58FF3 399 aa18.76■□□□□ 0.59
LIN54-204ENST00000505397 MTMR14Q8NCE2 650 aa18.76■□□□□ 0.59
LIN54-204ENST00000505397 SH2D4AQ9H788 454 aa18.76■□□□□ 0.59
LIN54-204ENST00000505397 HPCAL4Q9UM19 191 aa18.76■□□□□ 0.59
LIN54-204ENST00000505397 SLC16A2P36021 539 aa18.76■□□□□ 0.59
LIN54-204ENST00000505397 RAD51AP2Q09MP3 1159 aa18.76■□□□□ 0.59
LIN54-204ENST00000505397 FKBP1CQ5VVH2 108 aa18.76■□□□□ 0.59
LIN54-204ENST00000505397 PPP1R18Q6NYC8 613 aa18.76■□□□□ 0.59
LIN54-204ENST00000505397 KRT26Q7Z3Y9 468 aa18.76■□□□□ 0.59
LIN54-204ENST00000505397 CREG2Q8IUH2 290 aa18.76■□□□□ 0.59
LIN54-204ENST00000505397 RAD54LQ92698 747 aa18.76■□□□□ 0.59
LIN54-204ENST00000505397 CCDC102AQ96A19 550 aa18.76■□□□□ 0.59
LIN54-204ENST00000505397 COA7Q96BR5 231 aa18.76■□□□□ 0.59
LIN54-204ENST00000505397 SNX12Q9UMY4 172 aa18.76■□□□□ 0.59
LIN54-204ENST00000505397 PCDHA13Q9Y5I0 950 aa18.76■□□□□ 0.59
LIN54-204ENST00000505397 MACROD2A1Z1Q3 448 aa18.75■□□□□ 0.59
LIN54-204ENST00000505397 FGFR1OPO95684 399 aaKnown RBP18.75■□□□□ 0.59
LIN54-204ENST00000505397 TMEM119Q4V9L6 283 aa18.75■□□□□ 0.59
LIN54-204ENST00000505397 LRRC55Q6ZSA7 311 aa18.75■□□□□ 0.59
LIN54-204ENST00000505397 CCDC84Q86UT8 332 aaPredicted RBP18.75■□□□□ 0.59
LIN54-204ENST00000505397 COG1Q8WTW3 980 aa18.75■□□□□ 0.59
LIN54-204ENST00000505397 NFKBIEO00221 500 aa18.75■□□□□ 0.59
LIN54-204ENST00000505397 IRX5P78411 483 aaPredicted RBP18.75■□□□□ 0.59
LIN54-204ENST00000505397 CCNI2Q6ZMN8 369 aaPredicted RBP18.75■□□□□ 0.59
LIN54-204ENST00000505397 ZBTB5O15062 677 aa18.74■□□□□ 0.59
LIN54-204ENST00000505397 USO1O60763 962 aaKnown RBP18.74■□□□□ 0.59
LIN54-204ENST00000505397 PRPF6O94906 941 aaKnown RBP18.74■□□□□ 0.59
LIN54-204ENST00000505397 KIF11P52732 1056 aa18.74■□□□□ 0.59
LIN54-204ENST00000505397 PSMD2Q13200 908 aa18.74■□□□□ 0.59
LIN54-204ENST00000505397 MMGT1Q8N4V1 131 aa18.74■□□□□ 0.59
LIN54-204ENST00000505397 BAP1Q92560 729 aa18.74■□□□□ 0.59
LIN54-204ENST00000505397 IFIH1Q9BYX4 1025 aaKnown RBP18.74■□□□□ 0.59
LIN54-204ENST00000505397 CAPN6Q9Y6Q1 641 aa18.74■□□□□ 0.59
LIN54-204ENST00000505397 TDP2O95551 362 aa18.74■□□□□ 0.59
LIN54-204ENST00000505397 TMEM266Q2M3C6 531 aa18.74■□□□□ 0.59
LIN54-204ENST00000505397 ASTE1Q2TB18 679 aaPredicted RBP18.74■□□□□ 0.59
LIN54-204ENST00000505397 IQCEQ6IPM2 695 aa18.74■□□□□ 0.59
LIN54-204ENST00000505397 EDEM3Q9BZQ6 932 aa18.74■□□□□ 0.59
LIN54-204ENST00000505397 JADE2Q9NQC1 790 aa18.74■□□□□ 0.59
LIN54-204ENST00000505397 RNF216Q9NWF9 866 aaPredicted RBP18.74■□□□□ 0.59
LIN54-204ENST00000505397 CNTNAP1P78357 1384 aa18.74■□□□□ 0.59
LIN54-204ENST00000505397 USP17L10C9JJH3 530 aa18.73■□□□□ 0.59
LIN54-204ENST00000505397 PJA2O43164 708 aa18.73■□□□□ 0.59
LIN54-204ENST00000505397 FAM83AQ86UY5 434 aa18.73■□□□□ 0.59
LIN54-204ENST00000505397 GMCL1P1Q8NEA9 526 aa18.73■□□□□ 0.59
LIN54-204ENST00000505397 NUDT12Q9BQG2 462 aa18.73■□□□□ 0.59
LIN54-204ENST00000505397 MYOZ2Q9NPC6 264 aa18.73■□□□□ 0.59
LIN54-204ENST00000505397 F5H6K3 240 aa18.73■□□□□ 0.59
LIN54-204ENST00000505397 TACC1O75410 805 aa18.73■□□□□ 0.59
LIN54-204ENST00000505397 CAPN2P17655 700 aa18.73■□□□□ 0.59
LIN54-204ENST00000505397 EIF4A3P38919 411 aaKnown RBP18.73■□□□□ 0.59
LIN54-204ENST00000505397 KLRC3Q07444 240 aa18.73■□□□□ 0.59
LIN54-204ENST00000505397 PPP4R3AQ6IN85 833 aa18.73■□□□□ 0.59
LIN54-204ENST00000505397 ARHGAP27Q6ZUM4 889 aa18.73■□□□□ 0.59
LIN54-204ENST00000505397 DYMQ7RTS9 669 aa18.73■□□□□ 0.59
LIN54-204ENST00000505397 RUBCNQ92622 972 aa18.73■□□□□ 0.59
LIN54-204ENST00000505397 RAB34Q9BZG1 259 aa18.73■□□□□ 0.59
LIN54-204ENST00000505397 LRRC27Q9C0I9 530 aa18.73■□□□□ 0.59
LIN54-204ENST00000505397 RIC8AQ9NPQ8 531 aa18.73■□□□□ 0.59
LIN54-204ENST00000505397 FAM207AQ9NSI2 230 aaPredicted RBP18.73■□□□□ 0.59
LIN54-204ENST00000505397 CWC15Q9P013 229 aaKnown RBP18.73■□□□□ 0.59
LIN54-204ENST00000505397 POTEMA6NI47 508 aa18.73■□□□□ 0.59
LIN54-204ENST00000505397 MYBL2P10244 700 aa18.73■□□□□ 0.59
LIN54-204ENST00000505397 IKQ13123 557 aaPredicted RBP18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms