RNA–Protein interactions for RNA: ENST00000505066.5

DDR1-256, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 4

Gene DDR1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-256	ENST00000505066	NBN	O60934	754 aa		18.8	■□□□□ 0.6
DDR1-256	ENST00000505066	GJB5	O95377	273 aa		18.8	■□□□□ 0.6
DDR1-256	ENST00000505066	POU3F3	P20264	500 aa	Predicted RBP	18.8	■□□□□ 0.6
DDR1-256	ENST00000505066	ANTXR2	P58335	489 aa		18.8	■□□□□ 0.6
DDR1-256	ENST00000505066	ZNF200	P98182	395 aa	Predicted RBP	18.8	■□□□□ 0.6
DDR1-256	ENST00000505066	SP2	Q02086	613 aa		18.8	■□□□□ 0.6
DDR1-256	ENST00000505066	USP17L6P	Q6QN14	398 aa		18.8	■□□□□ 0.6
DDR1-256	ENST00000505066	MYOCD	Q8IZQ8	938 aa		18.8	■□□□□ 0.6
DDR1-256	ENST00000505066	GLG1	Q92896	1179 aa		18.8	■□□□□ 0.6
DDR1-256	ENST00000505066	HLA-C	Q95604	372 aa		18.8	■□□□□ 0.6
DDR1-256	ENST00000505066	GPRASP2	Q96D09	838 aa		18.8	■□□□□ 0.6
DDR1-256	ENST00000505066	VWCE	Q96DN2	955 aa		18.8	■□□□□ 0.6
DDR1-256	ENST00000505066	ESYT1	Q9BSJ8	1104 aa		18.8	■□□□□ 0.6
DDR1-256	ENST00000505066	SENP2	Q9HC62	589 aa		18.8	■□□□□ 0.6
DDR1-256	ENST00000505066	MTCH2	Q9Y6C9	303 aa		18.8	■□□□□ 0.6
DDR1-256	ENST00000505066	SCN10A	Q9Y5Y9	1956 aa		18.8	■□□□□ 0.6
DDR1-256	ENST00000505066	LCT	P09848	1927 aa		18.8	■□□□□ 0.6
DDR1-256	ENST00000505066		A0A0C4DFX4	3053 aa		18.8	■□□□□ 0.6
DDR1-256	ENST00000505066	SH2B2	O14492	632 aa	Predicted RBP	18.79	■□□□□ 0.6
DDR1-256	ENST00000505066	SLC27A2	O14975	620 aa		18.79	■□□□□ 0.6
DDR1-256	ENST00000505066	MAFG	O15525	162 aa		18.79	■□□□□ 0.6
DDR1-256	ENST00000505066	RPLP2	P05387	115 aa	Known RBP	18.79	■□□□□ 0.6
DDR1-256	ENST00000505066	ARHGAP4	P98171	946 aa		18.79	■□□□□ 0.6
DDR1-256	ENST00000505066	PTPRO	Q16827	1216 aa		18.79	■□□□□ 0.6
DDR1-256	ENST00000505066	HEATR3	Q7Z4Q2	680 aa		18.79	■□□□□ 0.6
DDR1-256	ENST00000505066	APBB2	Q92870	758 aa		18.79	■□□□□ 0.6
DDR1-256	ENST00000505066	YME1L1	Q96TA2	773 aa		18.79	■□□□□ 0.6
DDR1-256	ENST00000505066	GPR20	Q99678	358 aa		18.79	■□□□□ 0.6
DDR1-256	ENST00000505066	AZI2	Q9H6S1	392 aa		18.79	■□□□□ 0.6
DDR1-256	ENST00000505066	RBM28	Q9NW13	759 aa	Known RBP	18.79	■□□□□ 0.6
DDR1-256	ENST00000505066	FRMPD4	Q14CM0	1322 aa		18.78	■□□□□ 0.6
DDR1-256	ENST00000505066	NRCAM	Q92823	1304 aa		18.78	■□□□□ 0.6
DDR1-256	ENST00000505066	RFXAP	O00287	272 aa		18.78	■□□□□ 0.6
DDR1-256	ENST00000505066	DEFB103A	P81534	67 aa		18.78	■□□□□ 0.6
DDR1-256	ENST00000505066	MRPS9	P82933	396 aa	Known RBP	18.78	■□□□□ 0.6
DDR1-256	ENST00000505066	MTMR1	Q13613	665 aa		18.78	■□□□□ 0.6
DDR1-256	ENST00000505066	KRT32	Q14532	448 aa		18.78	■□□□□ 0.6
DDR1-256	ENST00000505066	CREB3L3	Q68CJ9	461 aa		18.78	■□□□□ 0.6
DDR1-256	ENST00000505066	TAF2	Q6P1X5	1199 aa		18.78	■□□□□ 0.6
DDR1-256	ENST00000505066	MICU3	Q86XE3	530 aa		18.78	■□□□□ 0.6
DDR1-256	ENST00000505066	TEX2	Q8IWB9	1127 aa		18.78	■□□□□ 0.6
DDR1-256	ENST00000505066	CCDC82	Q8N4S0	544 aa		18.78	■□□□□ 0.6
DDR1-256	ENST00000505066	FANCB	Q8NB91	859 aa		18.78	■□□□□ 0.6
DDR1-256	ENST00000505066	SAMD11	Q96NU1	681 aa		18.78	■□□□□ 0.6
DDR1-256	ENST00000505066	CTAGE1	Q96RT6	745 aa		18.78	■□□□□ 0.6
DDR1-256	ENST00000505066	GLT8D2	Q9H1C3	349 aa		18.78	■□□□□ 0.6
DDR1-256	ENST00000505066	RNPEP	Q9H4A4	650 aa		18.78	■□□□□ 0.6
DDR1-256	ENST00000505066	SETD4	Q9NVD3	440 aa		18.78	■□□□□ 0.6
DDR1-256	ENST00000505066	MTUS1	Q9ULD2	1270 aa		18.78	■□□□□ 0.6
DDR1-256	ENST00000505066	NAP1L2	Q9ULW6	460 aa	Predicted RBP	18.78	■□□□□ 0.6
DDR1-256	ENST00000505066	CTSH	P09668	335 aa		18.77	■□□□□ 0.6
DDR1-256	ENST00000505066	GRB10	Q13322	594 aa		18.77	■□□□□ 0.6
DDR1-256	ENST00000505066	DBF4B	Q8NFT6	615 aa		18.77	■□□□□ 0.6
DDR1-256	ENST00000505066	SEPT1	Q8WYJ6	367 aa		18.77	■□□□□ 0.6
DDR1-256	ENST00000505066	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	18.77	■□□□□ 0.6
DDR1-256	ENST00000505066	SDF4	Q9BRK5	362 aa		18.77	■□□□□ 0.6
DDR1-256	ENST00000505066	ERAP1	Q9NZ08	941 aa		18.77	■□□□□ 0.6
DDR1-256	ENST00000505066		M0QZ92	97 aa		18.76	■□□□□ 0.59
DDR1-256	ENST00000505066	TREH	O43280	583 aa		18.76	■□□□□ 0.59
DDR1-256	ENST00000505066	PLEKHA8P1	O95397	391 aa		18.76	■□□□□ 0.59
DDR1-256	ENST00000505066	TCF7	P36402	384 aa	Predicted RBP	18.76	■□□□□ 0.59
DDR1-256	ENST00000505066	PPFIA1	Q13136	1202 aa		18.76	■□□□□ 0.59
DDR1-256	ENST00000505066	SLC35G1	Q2M3R5	365 aa		18.76	■□□□□ 0.59
DDR1-256	ENST00000505066	TRIM71	Q2Q1W2	868 aa	Known RBP	18.76	■□□□□ 0.59
DDR1-256	ENST00000505066	SRBD1	Q8N5C6	995 aa	Known RBP	18.76	■□□□□ 0.59
DDR1-256	ENST00000505066	FBXO22	Q8NEZ5	403 aa		18.76	■□□□□ 0.59
DDR1-256	ENST00000505066	LSG1	Q9H089	658 aa	Known RBP	18.76	■□□□□ 0.59
DDR1-256	ENST00000505066	SMARCAD1	Q9H4L7	1026 aa		18.76	■□□□□ 0.59
DDR1-256	ENST00000505066	TCEAL9	Q9UHQ7	104 aa		18.76	■□□□□ 0.59
DDR1-256	ENST00000505066	TAF6L	Q9Y6J9	622 aa		18.76	■□□□□ 0.59
DDR1-256	ENST00000505066	MEIS2	O14770	477 aa		18.75	■□□□□ 0.59
DDR1-256	ENST00000505066	FOS	P01100	380 aa	Predicted RBP	18.75	■□□□□ 0.59
DDR1-256	ENST00000505066	HMGB1	P09429	215 aa	Known RBP	18.75	■□□□□ 0.59
DDR1-256	ENST00000505066	RXRA	P19793	462 aa		18.75	■□□□□ 0.59
DDR1-256	ENST00000505066	ZNF76	P36508	570 aa		18.75	■□□□□ 0.59
DDR1-256	ENST00000505066	NAPA	P54920	295 aa		18.75	■□□□□ 0.59
DDR1-256	ENST00000505066	ERVK-21	P61565	698 aa		18.75	■□□□□ 0.59
DDR1-256	ENST00000505066	PLEKHG4	Q58EX7	1191 aa		18.75	■□□□□ 0.59
DDR1-256	ENST00000505066	CENPQ	Q7L2Z9	268 aa	Predicted RBP	18.75	■□□□□ 0.59
DDR1-256	ENST00000505066	NEK1	Q96PY6	1258 aa		18.75	■□□□□ 0.59
DDR1-256	ENST00000505066	CCDC196	A0A1B0GTZ2	297 aa		18.74	■□□□□ 0.59
DDR1-256	ENST00000505066	LINC01553	A4QN01	128 aa		18.74	■□□□□ 0.59
DDR1-256	ENST00000505066	RRN3P2	A6NIE6	340 aa		18.74	■□□□□ 0.59
DDR1-256	ENST00000505066	hCG_1984214	I3L0E3	225 aa		18.74	■□□□□ 0.59
DDR1-256	ENST00000505066	UPP2	O95045	317 aa		18.74	■□□□□ 0.59
DDR1-256	ENST00000505066	BMP2KL	Q5H9B9	411 aa		18.74	■□□□□ 0.59
DDR1-256	ENST00000505066	PPP1R18	Q6NYC8	613 aa		18.74	■□□□□ 0.59
DDR1-256	ENST00000505066	TMTC3	Q6ZXV5	915 aa		18.74	■□□□□ 0.59
DDR1-256	ENST00000505066	TMCO2	Q7Z6W1	182 aa	Predicted RBP	18.74	■□□□□ 0.59
DDR1-256	ENST00000505066	CMTR1	Q8N1G2	835 aa	Known RBP	18.74	■□□□□ 0.59
DDR1-256	ENST00000505066	ZNF713	Q8N859	430 aa	Predicted RBP	18.74	■□□□□ 0.59
DDR1-256	ENST00000505066	IFIH1	Q9BYX4	1025 aa	Known RBP	18.74	■□□□□ 0.59
DDR1-256	ENST00000505066	PKD2L1	Q9P0L9	805 aa		18.74	■□□□□ 0.59
DDR1-256	ENST00000505066	PCDHA6	Q9UN73	950 aa		18.74	■□□□□ 0.59
DDR1-256	ENST00000505066	PCDHA8	Q9Y5H6	950 aa		18.74	■□□□□ 0.59
DDR1-256	ENST00000505066	LAMA2	P24043	3122 aa	Known RBP	18.74	■□□□□ 0.59
DDR1-256	ENST00000505066	LCHN	A4D1U4	455 aa		18.73	■□□□□ 0.59
DDR1-256	ENST00000505066	ZBTB43	O43298	467 aa		18.73	■□□□□ 0.59
DDR1-256	ENST00000505066	ADCY7	P51828	1080 aa		18.73	■□□□□ 0.59
DDR1-256	ENST00000505066	GPNMB	Q14956	572 aa		18.73	■□□□□ 0.59

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