RNA–Protein interactions for RNA: ENST00000505017.1

DEPDC1B-203, Transcript of DEP domain containing 1B, humanhuman

TSL 3

Gene DEPDC1B, Length 854 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-203ENST00000505017 GMLQ99445 158 aa7.44□□□□□ -1.22
DEPDC1B-203ENST00000505017 CNOT11Q9UKZ1 510 aaKnown RBP7.44□□□□□ -1.22
DEPDC1B-203ENST00000505017 GRIN2BQ13224 1484 aa7.43□□□□□ -1.22
DEPDC1B-203ENST00000505017 K7ESM1 405 aa7.43□□□□□ -1.22
DEPDC1B-203ENST00000505017 MYO1BO43795 1136 aa7.43□□□□□ -1.22
DEPDC1B-203ENST00000505017 MLLT6P55198 1093 aaPredicted RBP7.43□□□□□ -1.22
DEPDC1B-203ENST00000505017 MAP4K2Q12851 820 aa7.43□□□□□ -1.22
DEPDC1B-203ENST00000505017 NTRK3Q16288 839 aa7.43□□□□□ -1.22
DEPDC1B-203ENST00000505017 DDR2Q16832 855 aa7.43□□□□□ -1.22
DEPDC1B-203ENST00000505017 FAM26FQ5R3K3 315 aa7.43□□□□□ -1.22
DEPDC1B-203ENST00000505017 ERICH6BQ5W0A0 696 aa7.43□□□□□ -1.22
DEPDC1B-203ENST00000505017 ANKS3Q6ZW76 656 aa7.43□□□□□ -1.22
DEPDC1B-203ENST00000505017 ZC3H18Q86VM9 953 aaKnown RBP7.43□□□□□ -1.22
DEPDC1B-203ENST00000505017 PROSER1Q86XN7 944 aa7.43□□□□□ -1.22
DEPDC1B-203ENST00000505017 MBD6Q96DN6 1003 aa7.43□□□□□ -1.22
DEPDC1B-203ENST00000505017 ZSWIM3Q96MP5 696 aa7.43□□□□□ -1.22
DEPDC1B-203ENST00000505017 JAM3Q9BX67 310 aa7.43□□□□□ -1.22
DEPDC1B-203ENST00000505017 EPN3Q9H201 632 aa7.43□□□□□ -1.22
DEPDC1B-203ENST00000505017 PCDH18Q9HCL0 1135 aa7.43□□□□□ -1.22
DEPDC1B-203ENST00000505017 IGSF5Q9NSI5 407 aa7.43□□□□□ -1.22
DEPDC1B-203ENST00000505017 DTLQ9NZJ0 730 aa7.43□□□□□ -1.22
DEPDC1B-203ENST00000505017 INVSQ9Y283 1065 aa7.43□□□□□ -1.22
DEPDC1B-203ENST00000505017 TDRD9Q8NDG6 1382 aaKnown RBP7.43□□□□□ -1.22
DEPDC1B-203ENST00000505017 CLIP1P30622 1438 aa7.43□□□□□ -1.22
DEPDC1B-203ENST00000505017 DNAJA1P31689 397 aaKnown RBP7.42□□□□□ -1.22
DEPDC1B-203ENST00000505017 RBM10P98175 930 aaKnown RBP7.42□□□□□ -1.22
DEPDC1B-203ENST00000505017 TOE1Q96GM8 510 aaKnown RBP7.42□□□□□ -1.22
DEPDC1B-203ENST00000505017 CHAMP1Q96JM3 812 aa7.42□□□□□ -1.22
DEPDC1B-203ENST00000505017 ARHGEF4Q9NR80 690 aa7.42□□□□□ -1.22
DEPDC1B-203ENST00000505017 COA3Q9Y2R0 106 aaPredicted RBP7.42□□□□□ -1.22
DEPDC1B-203ENST00000505017 PCDHB4Q9Y5E5 795 aa7.42□□□□□ -1.22
DEPDC1B-203ENST00000505017 FHAD1B1AJZ9 1412 aa7.42□□□□□ -1.22
DEPDC1B-203ENST00000505017 MROH6A6NGR9 719 aa7.41□□□□□ -1.22
DEPDC1B-203ENST00000505017 B4GALT3O60512 393 aa7.41□□□□□ -1.22
DEPDC1B-203ENST00000505017 MAGEA10P43363 369 aaPredicted RBP7.41□□□□□ -1.22
DEPDC1B-203ENST00000505017 NKX3-2P78367 333 aa7.41□□□□□ -1.22
DEPDC1B-203ENST00000505017 GNL2Q13823 731 aaKnown RBP7.41□□□□□ -1.22
DEPDC1B-203ENST00000505017 KCNT2Q6UVM3 1135 aa7.41□□□□□ -1.22
DEPDC1B-203ENST00000505017 RBM12BQ8IXT5 1001 aaKnown RBP7.41□□□□□ -1.22
DEPDC1B-203ENST00000505017 ZCCHC14Q8WYQ9 949 aaKnown RBP7.41□□□□□ -1.22
DEPDC1B-203ENST00000505017 OSBP2Q969R2 916 aa7.41□□□□□ -1.22
DEPDC1B-203ENST00000505017 EPB41L1Q9H4G0 881 aa7.41□□□□□ -1.22
DEPDC1B-203ENST00000505017 GPR27Q9NS67 375 aa7.41□□□□□ -1.22
DEPDC1B-203ENST00000505017 ADAMTS12P58397 1594 aa7.41□□□□□ -1.22
DEPDC1B-203ENST00000505017 CTTNBP2Q8WZ74 1663 aa7.41□□□□□ -1.22
DEPDC1B-203ENST00000505017 PLATP00750 562 aa7.4□□□□□ -1.22
DEPDC1B-203ENST00000505017 SLC43A3Q8NBI5 491 aa7.4□□□□□ -1.22
DEPDC1B-203ENST00000505017 PIP4K2CQ8TBX8 421 aa7.4□□□□□ -1.22
DEPDC1B-203ENST00000505017 CLEC4DQ8WXI8 215 aa7.4□□□□□ -1.22
DEPDC1B-203ENST00000505017 KCTD13Q8WZ19 329 aa7.4□□□□□ -1.22
DEPDC1B-203ENST00000505017 YTHDC1Q96MU7 727 aaKnown RBP7.4□□□□□ -1.22
DEPDC1B-203ENST00000505017 MYOTQ9UBF9 498 aa7.4□□□□□ -1.22
DEPDC1B-203ENST00000505017 MAGI1Q96QZ7 1491 aaPredicted RBP7.4□□□□□ -1.22
DEPDC1B-203ENST00000505017 EIF4G3O43432 1585 aaKnown RBP7.4□□□□□ -1.22
DEPDC1B-203ENST00000505017 DGKIO75912 1065 aa7.39□□□□□ -1.23
DEPDC1B-203ENST00000505017 COL6A1P12109 1028 aa7.39□□□□□ -1.23
DEPDC1B-203ENST00000505017 INSRRP14616 1297 aa7.39□□□□□ -1.23
DEPDC1B-203ENST00000505017 ADAM17P78536 824 aa7.39□□□□□ -1.23
DEPDC1B-203ENST00000505017 YOD1Q5VVQ6 348 aaPredicted RBP7.39□□□□□ -1.23
DEPDC1B-203ENST00000505017 PHF20Q9BVI0 1012 aa7.39□□□□□ -1.23
DEPDC1B-203ENST00000505017 HSPBP1Q9NZL4 362 aa7.39□□□□□ -1.23
DEPDC1B-203ENST00000505017 ASH2LQ9UBL3 628 aa7.39□□□□□ -1.23
DEPDC1B-203ENST00000505017 TELO2Q9Y4R8 837 aa7.39□□□□□ -1.23
DEPDC1B-203ENST00000505017 EFCAB5A4FU69 1503 aa7.38□□□□□ -1.23
DEPDC1B-203ENST00000505017 ZNF608Q9ULD9 1512 aaPredicted RBP7.38□□□□□ -1.23
DEPDC1B-203ENST00000505017 AQRO60306 1485 aaKnown RBP eCLIP7.38□□□□□ -1.232e-7■■■■■ 29
DEPDC1B-203ENST00000505017 BLACEA4D250 179 aa7.38□□□□□ -1.23
DEPDC1B-203ENST00000505017 IL13P35225 146 aa7.38□□□□□ -1.23
DEPDC1B-203ENST00000505017 CHRNA2Q15822 529 aa7.38□□□□□ -1.23
DEPDC1B-203ENST00000505017 ZXDCQ2QGD7 858 aaPredicted RBP7.38□□□□□ -1.23
DEPDC1B-203ENST00000505017 PHF19Q5T6S3 580 aa7.38□□□□□ -1.23
DEPDC1B-203ENST00000505017 USP53Q70EK8 1073 aa7.38□□□□□ -1.23
DEPDC1B-203ENST00000505017 SMOC1Q9H4F8 434 aa7.38□□□□□ -1.23
DEPDC1B-203ENST00000505017 SLC6A20Q9NP91 592 aa7.38□□□□□ -1.23
DEPDC1B-203ENST00000505017 NGRNQ9NPE2 291 aaKnown RBP7.38□□□□□ -1.23
DEPDC1B-203ENST00000505017 SMPD4Q9NXE4 827 aa7.38□□□□□ -1.23
DEPDC1B-203ENST00000505017 VPS8Q8N3P4 1428 aa7.37□□□□□ -1.23
DEPDC1B-203ENST00000505017 SLC27A2O14975 620 aa7.37□□□□□ -1.23
DEPDC1B-203ENST00000505017 LTFP02788 710 aa7.37□□□□□ -1.23
DEPDC1B-203ENST00000505017 TMC5Q6UXY8 1006 aa7.37□□□□□ -1.23
DEPDC1B-203ENST00000505017 LIMS2Q7Z4I7 341 aa7.37□□□□□ -1.23
DEPDC1B-203ENST00000505017 LGI4Q8N135 537 aa7.37□□□□□ -1.23
DEPDC1B-203ENST00000505017 YIPF4Q9BSR8 244 aa7.37□□□□□ -1.23
DEPDC1B-203ENST00000505017 ASXL2Q76L83 1435 aa7.36□□□□□ -1.23
DEPDC1B-203ENST00000505017 C9orf118A6NHY6 69 aa7.36□□□□□ -1.23
DEPDC1B-203ENST00000505017 PRODHO43272 600 aa7.36□□□□□ -1.23
DEPDC1B-203ENST00000505017 KIAA2012Q0VF49 1180 aa7.36□□□□□ -1.23
DEPDC1B-203ENST00000505017 HABP4Q5JVS0 413 aaKnown RBP7.36□□□□□ -1.23
DEPDC1B-203ENST00000505017 PKN3Q6P5Z2 889 aa7.36□□□□□ -1.23
DEPDC1B-203ENST00000505017 LBX2Q6XYB7 198 aa7.36□□□□□ -1.23
DEPDC1B-203ENST00000505017 SGSM3Q96HU1 749 aa7.36□□□□□ -1.23
DEPDC1B-203ENST00000505017 LCORQ96JN0 433 aaPredicted RBP7.36□□□□□ -1.23
DEPDC1B-203ENST00000505017 PPP4R1LQ9P1A2 415 aa7.36□□□□□ -1.23
DEPDC1B-203ENST00000505017 NKRFO15226 690 aaKnown RBP eCLIP7.35□□□□□ -1.23
DEPDC1B-203ENST00000505017 FGFR1P11362 822 aa7.35□□□□□ -1.23
DEPDC1B-203ENST00000505017 PABPC1P11940 636 aaKnown RBP7.35□□□□□ -1.23
DEPDC1B-203ENST00000505017 COL6A2P12110 1019 aa7.35□□□□□ -1.23
DEPDC1B-203ENST00000505017 GRIN1Q05586 938 aa7.35□□□□□ -1.23
DEPDC1B-203ENST00000505017 RAB33AQ14088 237 aa7.35□□□□□ -1.23
DEPDC1B-203ENST00000505017 HSP90AA2PQ14568 343 aaPredicted RBP7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms