RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 MOXD1Q6UVY6 613 aa15.03■□□□□ -0
PDLIM7-212ENST00000504380 BRAPQ7Z569 592 aa15.03■□□□□ -0
PDLIM7-212ENST00000504380 U2AF1L4Q8WU68 220 aaKnown RBP15.03■□□□□ -0
PDLIM7-212ENST00000504380 AFG1LQ8WV93 481 aa15.03■□□□□ -0
PDLIM7-212ENST00000504380 HAS1Q92839 578 aa15.03■□□□□ -0
PDLIM7-212ENST00000504380 TMEM106CQ9BVX2 250 aa15.03■□□□□ -0
PDLIM7-212ENST00000504380 AP5M1Q9H0R1 490 aa15.03■□□□□ -0
PDLIM7-212ENST00000504380 MLXIPQ9HAP2 919 aa15.03■□□□□ -0
PDLIM7-212ENST00000504380 IPO5O00410 1097 aaKnown RBP15.02■□□□□ -0
PDLIM7-212ENST00000504380 DHX15O43143 795 aaKnown RBP15.02■□□□□ -0
PDLIM7-212ENST00000504380 FARP2O94887 1054 aaPredicted RBP15.02■□□□□ -0
PDLIM7-212ENST00000504380 SGPL1O95470 568 aa15.02■□□□□ -0
PDLIM7-212ENST00000504380 C6orf222P0C671 652 aaPredicted RBP15.02■□□□□ -0
PDLIM7-212ENST00000504380 SETQ01105 290 aaPredicted RBP15.02■□□□□ -0
PDLIM7-212ENST00000504380 CEBPZQ03701 1054 aaKnown RBP15.02■□□□□ -0
PDLIM7-212ENST00000504380 ETNPPLQ8TBG4 499 aa15.02■□□□□ -0
PDLIM7-212ENST00000504380 SLC5A5Q92911 643 aa15.02■□□□□ -0
PDLIM7-212ENST00000504380 CDHR1Q96JP9 859 aa15.02■□□□□ -0
PDLIM7-212ENST00000504380 SPATA33Q96N06 139 aa15.02■□□□□ -0
PDLIM7-212ENST00000504380 NAP1L4Q99733 375 aaKnown RBP15.02■□□□□ -0
PDLIM7-212ENST00000504380 ZSCAN16Q9H4T2 348 aaPredicted RBP15.02■□□□□ -0
PDLIM7-212ENST00000504380 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.02■□□□□ -0
PDLIM7-212ENST00000504380 TFIP11Q9UBB9 837 aaKnown RBP15.02■□□□□ -0
PDLIM7-212ENST00000504380 CLIC4Q9Y696 253 aa15.02■□□□□ -0
PDLIM7-212ENST00000504380 NKRFO15226 690 aaKnown RBP eCLIP15.01□□□□□ -0.01
PDLIM7-212ENST00000504380 MAFGO15525 162 aa15.01□□□□□ -0.01
PDLIM7-212ENST00000504380 MARCH6O60337 910 aa15.01□□□□□ -0.01
PDLIM7-212ENST00000504380 NEMFO60524 1076 aa15.01□□□□□ -0.01
PDLIM7-212ENST00000504380 MSCO60682 206 aa15.01□□□□□ -0.01
PDLIM7-212ENST00000504380 ADAMTS4O75173 837 aa15.01□□□□□ -0.01
PDLIM7-212ENST00000504380 EN2P19622 333 aaPredicted RBP15.01□□□□□ -0.01
PDLIM7-212ENST00000504380 TRAPPC10P48553 1259 aa15.01□□□□□ -0.01
PDLIM7-212ENST00000504380 GJA9P57773 515 aa15.01□□□□□ -0.01
PDLIM7-212ENST00000504380 NEDD9Q14511 834 aa15.01□□□□□ -0.01
PDLIM7-212ENST00000504380 LRRC41Q15345 812 aa15.01□□□□□ -0.01
PDLIM7-212ENST00000504380 CALCRLQ16602 461 aa15.01□□□□□ -0.01
PDLIM7-212ENST00000504380 HSDL1Q3SXM5 330 aa15.01□□□□□ -0.01
PDLIM7-212ENST00000504380 RILPL1Q5EBL4 403 aa15.01□□□□□ -0.01
PDLIM7-212ENST00000504380 C4orf32Q8N8J7 132 aa15.01□□□□□ -0.01
PDLIM7-212ENST00000504380 SENP7Q9BQF6 1050 aa15.01□□□□□ -0.01
PDLIM7-212ENST00000504380 SDF4Q9BRK5 362 aa15.01□□□□□ -0.01
PDLIM7-212ENST00000504380 CRISPLD2Q9H0B8 497 aa15.01□□□□□ -0.01
PDLIM7-212ENST00000504380 UPF3AQ9H1J1 476 aaKnown RBP15.01□□□□□ -0.01
PDLIM7-212ENST00000504380 KCNMB3Q9NPA1 279 aa15.01□□□□□ -0.01
PDLIM7-212ENST00000504380 CHMP2AO43633 222 aa15□□□□□ -0.01
PDLIM7-212ENST00000504380 GAS7O60861 476 aa15□□□□□ -0.01
PDLIM7-212ENST00000504380 CCNE2O96020 404 aa15□□□□□ -0.01
PDLIM7-212ENST00000504380 MYL3P08590 195 aa15□□□□□ -0.01
PDLIM7-212ENST00000504380 TXKP42681 527 aa15□□□□□ -0.01
PDLIM7-212ENST00000504380 GJA8P48165 433 aa15□□□□□ -0.01
PDLIM7-212ENST00000504380 PTGDRQ13258 359 aa15□□□□□ -0.01
PDLIM7-212ENST00000504380 LAMC2Q13753 1193 aa15□□□□□ -0.01
PDLIM7-212ENST00000504380 FSCN1Q16658 493 aaKnown RBP15□□□□□ -0.01
PDLIM7-212ENST00000504380 GNASQ5JWF2 1037 aa15□□□□□ -0.01
PDLIM7-212ENST00000504380 LRCH2Q5VUJ6 765 aa15□□□□□ -0.01
PDLIM7-212ENST00000504380 METTL7BQ6UX53 244 aa15□□□□□ -0.01
PDLIM7-212ENST00000504380 KLHDC9Q8NEP7 349 aa15□□□□□ -0.01
PDLIM7-212ENST00000504380 PPP1R13LQ8WUF5 828 aa15□□□□□ -0.01
PDLIM7-212ENST00000504380 MTMR9Q96QG7 549 aa15□□□□□ -0.01
PDLIM7-212ENST00000504380 USP28Q96RU2 1077 aa15□□□□□ -0.01
PDLIM7-212ENST00000504380 UNC45AQ9H3U1 944 aa15□□□□□ -0.01
PDLIM7-212ENST00000504380 SLC9A2Q9UBY0 812 aa15□□□□□ -0.01
PDLIM7-212ENST00000504380 OGDHLQ9ULD0 1010 aa15□□□□□ -0.01
PDLIM7-212ENST00000504380 Q9Y3F1 56 aa15□□□□□ -0.01
PDLIM7-212ENST00000504380 NFASCO94856 1347 aa14.99□□□□□ -0.01
PDLIM7-212ENST00000504380 GSTTP1A0A1W2PQM5 241 aa14.99□□□□□ -0.01
PDLIM7-212ENST00000504380 PSMD10O75832 226 aa14.99□□□□□ -0.01
PDLIM7-212ENST00000504380 MMP3P08254 477 aa14.99□□□□□ -0.01
PDLIM7-212ENST00000504380 OR52Z1P0C646 297 aa14.99□□□□□ -0.01
PDLIM7-212ENST00000504380 SF3A1Q15459 793 aaKnown RBP14.99□□□□□ -0.01
PDLIM7-212ENST00000504380 KCNA10Q16322 511 aa14.99□□□□□ -0.01
PDLIM7-212ENST00000504380 UTP14CQ5TAP6 766 aaKnown RBP14.99□□□□□ -0.01
PDLIM7-212ENST00000504380 DIS3LQ8TF46 1054 aaKnown RBP14.99□□□□□ -0.01
PDLIM7-212ENST00000504380 GPR20Q99678 358 aa14.99□□□□□ -0.01
PDLIM7-212ENST00000504380 TEKT3Q9BXF9 490 aa14.99□□□□□ -0.01
PDLIM7-212ENST00000504380 SPC25Q9HBM1 224 aa14.99□□□□□ -0.01
PDLIM7-212ENST00000504380 JPH1Q9HDC5 661 aaPredicted RBP14.99□□□□□ -0.01
PDLIM7-212ENST00000504380 MYH15Q9Y2K3 1946 aa14.99□□□□□ -0.01
PDLIM7-212ENST00000504380 NOP56O00567 594 aaKnown RBP14.98□□□□□ -0.01
PDLIM7-212ENST00000504380 BAG4O95429 457 aaKnown RBP14.98□□□□□ -0.01
PDLIM7-212ENST00000504380 ZNF286BP0CG31 522 aa14.98□□□□□ -0.01
PDLIM7-212ENST00000504380 PDIA4P13667 645 aaKnown RBP14.98□□□□□ -0.01
PDLIM7-212ENST00000504380 MNX1P50219 401 aaPredicted RBP14.98□□□□□ -0.01
PDLIM7-212ENST00000504380 ACTR2P61160 394 aa14.98□□□□□ -0.01
PDLIM7-212ENST00000504380 NUCB2P80303 420 aa14.98□□□□□ -0.01
PDLIM7-212ENST00000504380 DNM1Q05193 864 aaKnown RBP14.98□□□□□ -0.01
PDLIM7-212ENST00000504380 IL17AQ16552 155 aa14.98□□□□□ -0.01
PDLIM7-212ENST00000504380 CCSAPQ6IQ19 270 aaPredicted RBP14.98□□□□□ -0.01
PDLIM7-212ENST00000504380 CXCL17Q6UXB2 119 aa14.98□□□□□ -0.01
PDLIM7-212ENST00000504380 RNF180Q86T96 592 aa14.98□□□□□ -0.01
PDLIM7-212ENST00000504380 ARRDC4Q8NCT1 418 aa14.98□□□□□ -0.01
PDLIM7-212ENST00000504380 GIMAP8Q8ND71 665 aaPredicted RBP14.98□□□□□ -0.01
PDLIM7-212ENST00000504380 PPTC7Q8NI37 304 aa14.98□□□□□ -0.01
PDLIM7-212ENST00000504380 EMID1Q96A84 441 aaPredicted RBP14.98□□□□□ -0.01
PDLIM7-212ENST00000504380 FERMT2Q96AC1 680 aa14.98□□□□□ -0.01
PDLIM7-212ENST00000504380 FAM20AQ96MK3 541 aa14.98□□□□□ -0.01
PDLIM7-212ENST00000504380 RIT2Q99578 217 aa14.98□□□□□ -0.01
PDLIM7-212ENST00000504380 TBC1D22BQ9NU19 505 aa14.98□□□□□ -0.01
PDLIM7-212ENST00000504380 VAV3Q9UKW4 847 aa14.98□□□□□ -0.01
PDLIM7-212ENST00000504380 MKI67P46013 3256 aaKnown RBP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms