RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 ATP5OP48047 213 aa6.75□□□□□ -1.33
CLCN3-204ENST00000504131 FKBP4Q02790 459 aaKnown RBP eCLIP6.75□□□□□ -1.33
CLCN3-204ENST00000504131 FCHO2Q0JRZ9 810 aa6.75□□□□□ -1.33
CLCN3-204ENST00000504131 DHX34Q14147 1143 aaKnown RBP6.75□□□□□ -1.33
CLCN3-204ENST00000504131 ERCC6LQ2NKX8 1250 aa6.75□□□□□ -1.33
CLCN3-204ENST00000504131 IGSF11Q5DX21 431 aa6.75□□□□□ -1.33
CLCN3-204ENST00000504131 BORAQ6PGQ7 559 aa6.75□□□□□ -1.33
CLCN3-204ENST00000504131 TDRD1Q9BXT4 1180 aaKnown RBP6.75□□□□□ -1.33
CLCN3-204ENST00000504131 USP26Q9BXU7 913 aa6.75□□□□□ -1.33
CLCN3-204ENST00000504131 ATP13A3Q9H7F0 1226 aa6.75□□□□□ -1.33
CLCN3-204ENST00000504131 PDE11AQ9HCR9 933 aa6.75□□□□□ -1.33
CLCN3-204ENST00000504131 SLC35C2Q9NQQ7 365 aa6.75□□□□□ -1.33
CLCN3-204ENST00000504131 POLE3Q9NRF9 147 aa6.75□□□□□ -1.33
CLCN3-204ENST00000504131 DBNLQ9UJU6 430 aaKnown RBP6.75□□□□□ -1.33
CLCN3-204ENST00000504131 CLASP1Q7Z460 1538 aa6.75□□□□□ -1.33
CLCN3-204ENST00000504131 ARHGEF9O43307 516 aa6.75□□□□□ -1.33
CLCN3-204ENST00000504131 TMCC2O75069 709 aa6.75□□□□□ -1.33
CLCN3-204ENST00000504131 IL32P24001 234 aa6.75□□□□□ -1.33
CLCN3-204ENST00000504131 KCNJ6P48051 423 aa6.75□□□□□ -1.33
CLCN3-204ENST00000504131 RCAN1P53805 252 aa6.75□□□□□ -1.33
CLCN3-204ENST00000504131 ADARP55265 1226 aaKnown RBP6.75□□□□□ -1.33
CLCN3-204ENST00000504131 LRMPQ12912 555 aa6.75□□□□□ -1.33
CLCN3-204ENST00000504131 ANKRD20A8PQ5CZ79 823 aa6.75□□□□□ -1.33
CLCN3-204ENST00000504131 ANKRD20A2Q5SQ80 823 aa6.75□□□□□ -1.33
CLCN3-204ENST00000504131 ANKRD20A3Q5VUR7 823 aa6.75□□□□□ -1.33
CLCN3-204ENST00000504131 TMEM154Q6P9G4 183 aa6.75□□□□□ -1.33
CLCN3-204ENST00000504131 CDH24Q86UP0 819 aa6.75□□□□□ -1.33
CLCN3-204ENST00000504131 NLRP13Q86W25 1043 aa6.75□□□□□ -1.33
CLCN3-204ENST00000504131 USHBP1Q8N6Y0 703 aa6.75□□□□□ -1.33
CLCN3-204ENST00000504131 STKLD1Q8NE28 680 aa6.75□□□□□ -1.33
CLCN3-204ENST00000504131 KIFAP3Q92845 792 aa6.75□□□□□ -1.33
CLCN3-204ENST00000504131 ANKRD36BP1Q96IX9 119 aa6.75□□□□□ -1.33
CLCN3-204ENST00000504131 COQ3Q9NZJ6 369 aa6.75□□□□□ -1.33
CLCN3-204ENST00000504131 AKAP7Q9P0M2 348 aaPredicted RBP6.75□□□□□ -1.33
CLCN3-204ENST00000504131 SRP68Q9UHB9 627 aaKnown RBP6.75□□□□□ -1.33
CLCN3-204ENST00000504131 TSR3Q9UJK0 312 aaKnown RBP6.75□□□□□ -1.33
CLCN3-204ENST00000504131 PARP3Q9Y6F1 533 aa6.75□□□□□ -1.33
CLCN3-204ENST00000504131 EFCAB5A4FU69 1503 aa6.75□□□□□ -1.33
CLCN3-204ENST00000504131 UGGT2Q9NYU1 1516 aa6.75□□□□□ -1.33
CLCN3-204ENST00000504131 LRRC72A6NJI9 287 aa6.75□□□□□ -1.33
CLCN3-204ENST00000504131 SURF6O75683 361 aaKnown RBP6.75□□□□□ -1.33
CLCN3-204ENST00000504131 CYP1A2P05177 515 aa6.75□□□□□ -1.33
CLCN3-204ENST00000504131 EIF2S1P05198 315 aaKnown RBP6.75□□□□□ -1.33
CLCN3-204ENST00000504131 POLR2BP30876 1174 aaKnown RBP6.75□□□□□ -1.33
CLCN3-204ENST00000504131 SERPINB8P50452 374 aa6.75□□□□□ -1.33
CLCN3-204ENST00000504131 KLHL30Q0D2K2 578 aa6.75□□□□□ -1.33
CLCN3-204ENST00000504131 VPS37DQ86XT2 251 aa6.75□□□□□ -1.33
CLCN3-204ENST00000504131 COLGALT2Q8IYK4 626 aa6.75□□□□□ -1.33
CLCN3-204ENST00000504131 SLC7A3Q8WY07 619 aa6.75□□□□□ -1.33
CLCN3-204ENST00000504131 ZNF75CPQ92670 426 aaPredicted RBP6.75□□□□□ -1.33
CLCN3-204ENST00000504131 ZKSCAN4Q969J2 545 aaPredicted RBP6.75□□□□□ -1.33
CLCN3-204ENST00000504131 NMD3Q96D46 503 aaKnown RBP6.75□□□□□ -1.33
CLCN3-204ENST00000504131 TCEANC2Q96MN5 208 aa6.75□□□□□ -1.33
CLCN3-204ENST00000504131 OSBPL2Q9H1P3 480 aa6.75□□□□□ -1.33
CLCN3-204ENST00000504131 SAMD15Q9P1V8 674 aa6.75□□□□□ -1.33
CLCN3-204ENST00000504131 APPL1Q9UKG1 709 aa6.75□□□□□ -1.33
CLCN3-204ENST00000504131 TMCO1Q9UM00 188 aa6.75□□□□□ -1.33
CLCN3-204ENST00000504131 ZMYM3Q14202 1370 aa6.75□□□□□ -1.33
CLCN3-204ENST00000504131 ZC3H11AO75152 810 aaKnown RBP eCLIP6.74□□□□□ -1.33
CLCN3-204ENST00000504131 GNA13Q14344 377 aa6.74□□□□□ -1.33
CLCN3-204ENST00000504131 KMT5BQ4FZB7 885 aa6.74□□□□□ -1.33
CLCN3-204ENST00000504131 MCUR1Q96AQ8 359 aa6.74□□□□□ -1.33
CLCN3-204ENST00000504131 TBC1D23Q9NUY8 699 aa6.74□□□□□ -1.33
CLCN3-204ENST00000504131 A0A1W2PRG0 241 aa6.74□□□□□ -1.33
CLCN3-204ENST00000504131 HMGB3O15347 200 aaKnown RBP6.74□□□□□ -1.33
CLCN3-204ENST00000504131 ORC4O43929 436 aa6.74□□□□□ -1.33
CLCN3-204ENST00000504131 BAIAP3O94812 1187 aa6.74□□□□□ -1.33
CLCN3-204ENST00000504131 ENO2P09104 434 aaPredicted RBP6.74□□□□□ -1.33
CLCN3-204ENST00000504131 TARSP26639 723 aaKnown RBP6.74□□□□□ -1.33
CLCN3-204ENST00000504131 MAPK1P28482 360 aa6.74□□□□□ -1.33
CLCN3-204ENST00000504131 RASSF7Q02833 373 aa6.74□□□□□ -1.33
CLCN3-204ENST00000504131 PUDPQ08623 228 aa6.74□□□□□ -1.33
CLCN3-204ENST00000504131 PCSK7Q16549 785 aa6.74□□□□□ -1.33
CLCN3-204ENST00000504131 SULT1C3Q6IMI6 304 aa6.74□□□□□ -1.33
CLCN3-204ENST00000504131 ATP8B4Q8TF62 1192 aa6.74□□□□□ -1.33
CLCN3-204ENST00000504131 FAXDC2Q96IV6 333 aa6.74□□□□□ -1.33
CLCN3-204ENST00000504131 CAPZA3Q96KX2 299 aa6.74□□□□□ -1.33
CLCN3-204ENST00000504131 KRT23Q9C075 422 aa6.74□□□□□ -1.33
CLCN3-204ENST00000504131 NEUROD4Q9HD90 331 aa6.74□□□□□ -1.33
CLCN3-204ENST00000504131 ACAD8Q9UKU7 415 aa6.74□□□□□ -1.33
CLCN3-204ENST00000504131 ADCY10Q96PN6 1610 aa6.74□□□□□ -1.33
CLCN3-204ENST00000504131 MYO1FO00160 1098 aa6.74□□□□□ -1.33
CLCN3-204ENST00000504131 HCLS1P14317 486 aaPredicted RBP6.74□□□□□ -1.33
CLCN3-204ENST00000504131 PDHA2P29803 388 aa6.74□□□□□ -1.33
CLCN3-204ENST00000504131 CLCN6P51797 869 aa6.74□□□□□ -1.33
CLCN3-204ENST00000504131 NEK3P51956 506 aa6.74□□□□□ -1.33
CLCN3-204ENST00000504131 KRT85P78386 507 aa6.74□□□□□ -1.33
CLCN3-204ENST00000504131 TBC1D25Q3MII6 688 aa6.74□□□□□ -1.33
CLCN3-204ENST00000504131 ANKS6Q68DC2 871 aa6.74□□□□□ -1.33
CLCN3-204ENST00000504131 GALNT7Q86SF2 657 aa6.74□□□□□ -1.33
CLCN3-204ENST00000504131 NME9Q86XW9 330 aa6.74□□□□□ -1.33
CLCN3-204ENST00000504131 TSEN34Q9BSV6 310 aaKnown RBP6.74□□□□□ -1.33
CLCN3-204ENST00000504131 GLT8D2Q9H1C3 349 aa6.74□□□□□ -1.33
CLCN3-204ENST00000504131 BRD9Q9H8M2 597 aa6.74□□□□□ -1.33
CLCN3-204ENST00000504131 HAUS2Q9NVX0 235 aa6.74□□□□□ -1.33
CLCN3-204ENST00000504131 PCDHGA1Q9Y5H4 931 aa6.74□□□□□ -1.33
CLCN3-204ENST00000504131 ANKRD33BA6NCL7 494 aa6.74□□□□□ -1.33
CLCN3-204ENST00000504131 KRT87PA6NCN2 255 aa6.74□□□□□ -1.33
CLCN3-204ENST00000504131 ASS1P00966 412 aaKnown RBP6.74□□□□□ -1.33
CLCN3-204ENST00000504131 CCDC166P0CW27 439 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms