RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 NAB2Q15742 525 aa3.1□□□□□ -1.91
NEDD4-204ENST00000503468 HLFQ16534 295 aa3.1□□□□□ -1.91
NEDD4-204ENST00000503468 CFAP58Q5T655 872 aa3.1□□□□□ -1.91
NEDD4-204ENST00000503468 ADGRA1Q86SQ6 560 aa3.1□□□□□ -1.91
NEDD4-204ENST00000503468 FAM217AQ8IXS0 508 aa3.1□□□□□ -1.91
NEDD4-204ENST00000503468 TNIP2Q8NFZ5 429 aa3.1□□□□□ -1.91
NEDD4-204ENST00000503468 ENOX1Q8TC92 643 aaKnown RBP3.1□□□□□ -1.91
NEDD4-204ENST00000503468 LARP6Q9BRS8 491 aaKnown RBP3.1□□□□□ -1.91
NEDD4-204ENST00000503468 NIFKQ9BYG3 293 aaKnown RBP3.1□□□□□ -1.91
NEDD4-204ENST00000503468 ZNHIT6Q9NWK9 470 aaKnown RBP3.1□□□□□ -1.91
NEDD4-204ENST00000503468 DACT1Q9NYF0 836 aa3.1□□□□□ -1.91
NEDD4-204ENST00000503468 TFIP11Q9UBB9 837 aaKnown RBP3.1□□□□□ -1.91
NEDD4-204ENST00000503468 SCN5AQ14524 2016 aa3.1□□□□□ -1.91
NEDD4-204ENST00000503468 VPS37CA5D8V6 355 aaPredicted RBP3.09□□□□□ -1.91
NEDD4-204ENST00000503468 AGAP14A8MT82 685 aa3.09□□□□□ -1.91
NEDD4-204ENST00000503468 SNUPNO95149 360 aaKnown RBP3.09□□□□□ -1.91
NEDD4-204ENST00000503468 BMP15O95972 392 aa3.09□□□□□ -1.91
NEDD4-204ENST00000503468 GPTP24298 496 aa3.09□□□□□ -1.91
NEDD4-204ENST00000503468 FAM160A1Q05DH4 1040 aa3.09□□□□□ -1.91
NEDD4-204ENST00000503468 RIPK1Q13546 671 aa3.09□□□□□ -1.91
NEDD4-204ENST00000503468 TSR1Q2NL82 804 aaKnown RBP3.09□□□□□ -1.91
NEDD4-204ENST00000503468 SOGA3Q5TF21 947 aa3.09□□□□□ -1.91
NEDD4-204ENST00000503468 IRAK1BP1Q5VVH5 260 aa3.09□□□□□ -1.91
NEDD4-204ENST00000503468 KRT74Q7RTS7 529 aa3.09□□□□□ -1.91
NEDD4-204ENST00000503468 MFN1Q8IWA4 741 aa3.09□□□□□ -1.91
NEDD4-204ENST00000503468 CCAR1Q8IX12 1150 aaKnown RBP3.09□□□□□ -1.91
NEDD4-204ENST00000503468 EXOC8Q8IYI6 725 aa3.09□□□□□ -1.91
NEDD4-204ENST00000503468 ARHGAP18Q8N392 663 aa3.09□□□□□ -1.91
NEDD4-204ENST00000503468 LSM14AQ8ND56 463 aaKnown RBP3.09□□□□□ -1.91
NEDD4-204ENST00000503468 GIMAP8Q8ND71 665 aaPredicted RBP3.09□□□□□ -1.91
NEDD4-204ENST00000503468 LUC7LQ9NQ29 371 aaKnown RBP3.09□□□□□ -1.91
NEDD4-204ENST00000503468 PCM1Q15154 2024 aa3.09□□□□□ -1.91
NEDD4-204ENST00000503468 A0A1B0GTH6 734 aa3.09□□□□□ -1.91
NEDD4-204ENST00000503468 TARSL2A2RTX5 802 aaKnown RBP3.09□□□□□ -1.91
NEDD4-204ENST00000503468 ACTN4O43707 911 aaKnown RBP3.09□□□□□ -1.91
NEDD4-204ENST00000503468 LMNB1P20700 586 aa3.09□□□□□ -1.91
NEDD4-204ENST00000503468 KIF5BP33176 963 aa3.09□□□□□ -1.91
NEDD4-204ENST00000503468 HOXD13P35453 343 aa3.09□□□□□ -1.91
NEDD4-204ENST00000503468 SREBF1P36956 1147 aa3.09□□□□□ -1.91
NEDD4-204ENST00000503468 MLLT6P55198 1093 aaPredicted RBP3.09□□□□□ -1.91
NEDD4-204ENST00000503468 RAB15P59190 212 aa3.09□□□□□ -1.91
NEDD4-204ENST00000503468 MRPS25P82663 173 aaKnown RBP3.09□□□□□ -1.91
NEDD4-204ENST00000503468 ROR2Q01974 943 aaKnown RBP3.09□□□□□ -1.91
NEDD4-204ENST00000503468 PKDCCQ504Y2 493 aa3.09□□□□□ -1.91
NEDD4-204ENST00000503468 RRP12Q5JTH9 1297 aaKnown RBP3.09□□□□□ -1.91
NEDD4-204ENST00000503468 TYW1BQ6NUM6 668 aa3.09□□□□□ -1.91
NEDD4-204ENST00000503468 TTLL7Q6ZT98 887 aa3.09□□□□□ -1.91
NEDD4-204ENST00000503468 C12orf50Q8NA57 414 aaPredicted RBP3.09□□□□□ -1.91
NEDD4-204ENST00000503468 BCAS4Q8TDM0 211 aa3.09□□□□□ -1.91
NEDD4-204ENST00000503468 ZFAND2BQ8WV99 257 aa3.09□□□□□ -1.91
NEDD4-204ENST00000503468 GFM2Q969S9 779 aaKnown RBP3.09□□□□□ -1.91
NEDD4-204ENST00000503468 CYLDQ9NQC7 956 aa3.09□□□□□ -1.91
NEDD4-204ENST00000503468 BLOC1S4Q9NUP1 217 aa3.09□□□□□ -1.91
NEDD4-204ENST00000503468 INTUQ9ULD6 942 aa3.09□□□□□ -1.91
NEDD4-204ENST00000503468 PLAGL2Q9UPG8 496 aa3.09□□□□□ -1.91
NEDD4-204ENST00000503468 SYNRGQ9UMZ2 1314 aa3.09□□□□□ -1.91
NEDD4-204ENST00000503468 A0A0D9SFI3 127 aa3.09□□□□□ -1.91
NEDD4-204ENST00000503468 TOP1P11387 765 aaKnown RBP3.09□□□□□ -1.91
NEDD4-204ENST00000503468 ALAS1P13196 640 aa3.09□□□□□ -1.91
NEDD4-204ENST00000503468 PDIA3P30101 505 aaKnown RBP3.09□□□□□ -1.91
NEDD4-204ENST00000503468 PPP1R2P41236 205 aa3.09□□□□□ -1.91
NEDD4-204ENST00000503468 EAPPQ56P03 285 aaPredicted RBP3.09□□□□□ -1.91
NEDD4-204ENST00000503468 C1orf220Q5T0J3 134 aa3.09□□□□□ -1.91
NEDD4-204ENST00000503468 SLC30A9Q6PML9 568 aa3.09□□□□□ -1.91
NEDD4-204ENST00000503468 IQCA1Q86XH1 822 aa3.09□□□□□ -1.91
NEDD4-204ENST00000503468 CARD6Q9BX69 1037 aa3.09□□□□□ -1.91
NEDD4-204ENST00000503468 BRINP2Q9C0B6 783 aa3.09□□□□□ -1.91
NEDD4-204ENST00000503468 KCNG1Q9UIX4 513 aa3.09□□□□□ -1.91
NEDD4-204ENST00000503468 FBXO2Q9UK22 296 aaPredicted RBP3.09□□□□□ -1.91
NEDD4-204ENST00000503468 VWA8A3KMH1 1905 aa3.09□□□□□ -1.91
NEDD4-204ENST00000503468 TCF20Q9UGU0 1960 aaKnown RBP3.09□□□□□ -1.91
NEDD4-204ENST00000503468 CFAP73A6NFT4 308 aa3.09□□□□□ -1.92
NEDD4-204ENST00000503468 GOLGA8KD6RF30 607 aa3.09□□□□□ -1.92
NEDD4-204ENST00000503468 USP11P51784 963 aa3.09□□□□□ -1.92
NEDD4-204ENST00000503468 NLRP5P59047 1200 aa3.09□□□□□ -1.92
NEDD4-204ENST00000503468 MRPS35P82673 323 aaKnown RBP3.09□□□□□ -1.92
NEDD4-204ENST00000503468 G3BP1Q13283 466 aaKnown RBP eCLIP3.09□□□□□ -1.92
NEDD4-204ENST00000503468 TRIM14Q14142 442 aa3.09□□□□□ -1.92
NEDD4-204ENST00000503468 SF3A1Q15459 793 aaKnown RBP3.09□□□□□ -1.92
NEDD4-204ENST00000503468 CYP1B1Q16678 543 aa3.09□□□□□ -1.92
NEDD4-204ENST00000503468 SPECC1LQ69YQ0 1117 aa3.09□□□□□ -1.92
NEDD4-204ENST00000503468 CCDC117Q8IWD4 279 aaPredicted RBP3.09□□□□□ -1.92
NEDD4-204ENST00000503468 FAM114A1Q8IWE2 563 aa3.09□□□□□ -1.92
NEDD4-204ENST00000503468 STK11IPQ8N1F8 1099 aa3.09□□□□□ -1.92
NEDD4-204ENST00000503468 ZGPATQ8N5A5 531 aaKnown RBP3.09□□□□□ -1.92
NEDD4-204ENST00000503468 CCDC155Q8N6L0 562 aa3.09□□□□□ -1.92
NEDD4-204ENST00000503468 NEK9Q8TD19 979 aa3.09□□□□□ -1.92
NEDD4-204ENST00000503468 KCNG4Q8TDN1 519 aa3.09□□□□□ -1.92
NEDD4-204ENST00000503468 FAM151AQ8WW52 585 aa3.09□□□□□ -1.92
NEDD4-204ENST00000503468 MYRFLQ96LU7 910 aa3.09□□□□□ -1.92
NEDD4-204ENST00000503468 DNAJC7Q99615 494 aa3.09□□□□□ -1.92
NEDD4-204ENST00000503468 MKS1Q9NXB0 559 aa3.09□□□□□ -1.92
NEDD4-204ENST00000503468 ETAA1Q9NY74 926 aa3.09□□□□□ -1.92
NEDD4-204ENST00000503468 VPS18Q9P253 973 aa3.09□□□□□ -1.92
NEDD4-204ENST00000503468 CTNNAL1Q9UBT7 734 aa3.09□□□□□ -1.92
NEDD4-204ENST00000503468 RPL26L1Q9UNX3 145 aaKnown RBP3.09□□□□□ -1.92
NEDD4-204ENST00000503468 PRC1O43663 620 aa3.09□□□□□ -1.92
NEDD4-204ENST00000503468 IGLV3-25P01717 112 aa3.09□□□□□ -1.92
NEDD4-204ENST00000503468 RGS19P49795 217 aa3.09□□□□□ -1.92
NEDD4-204ENST00000503468 CDK18Q07002 472 aa3.09□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms