RNA–Protein interactions for RNA: ENST00000502998.1

CLCN3-203, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-203ENST00000502998 HNRNPCL1O60812 293 aaKnown RBP7.14□□□□□ -1.27
CLCN3-203ENST00000502998 PFDN1O60925 122 aa7.14□□□□□ -1.27
CLCN3-203ENST00000502998 LINGO3P0C6S8 592 aa7.14□□□□□ -1.27
CLCN3-203ENST00000502998 ATP4AP20648 1035 aa7.14□□□□□ -1.27
CLCN3-203ENST00000502998 PBX2P40425 430 aa7.14□□□□□ -1.27
CLCN3-203ENST00000502998 HALP42357 657 aa7.14□□□□□ -1.27
CLCN3-203ENST00000502998 ACADSBP45954 432 aa7.14□□□□□ -1.27
CLCN3-203ENST00000502998 TRAPPC10P48553 1259 aa7.14□□□□□ -1.27
CLCN3-203ENST00000502998 CENPAP49450 140 aa7.14□□□□□ -1.27
CLCN3-203ENST00000502998 COPAP53621 1224 aa7.14□□□□□ -1.27
CLCN3-203ENST00000502998 KIF5AQ12840 1032 aa7.14□□□□□ -1.27
CLCN3-203ENST00000502998 TRAP1Q12931 704 aaKnown RBP7.14□□□□□ -1.27
CLCN3-203ENST00000502998 PAK2Q13177 524 aa7.14□□□□□ -1.27
CLCN3-203ENST00000502998 SPIDRQ14159 915 aa7.14□□□□□ -1.27
CLCN3-203ENST00000502998 SF3B3Q15393 1217 aaKnown RBP7.14□□□□□ -1.27
CLCN3-203ENST00000502998 SKIV2LQ15477 1246 aaKnown RBP7.14□□□□□ -1.27
CLCN3-203ENST00000502998 C15orf59Q2T9L4 293 aaPredicted RBP7.14□□□□□ -1.27
CLCN3-203ENST00000502998 BBS9Q3SYG4 887 aa7.14□□□□□ -1.27
CLCN3-203ENST00000502998 CCDC40Q4G0X9 1142 aa7.14□□□□□ -1.27
CLCN3-203ENST00000502998 FKBP15Q5T1M5 1219 aa7.14□□□□□ -1.27
CLCN3-203ENST00000502998 C10orf62Q5T681 223 aaPredicted RBP7.14□□□□□ -1.27
CLCN3-203ENST00000502998 GKAP1Q5VSY0 366 aaPredicted RBP7.14□□□□□ -1.27
CLCN3-203ENST00000502998 FCRLBQ6BAA4 426 aa7.14□□□□□ -1.27
CLCN3-203ENST00000502998 LVRNQ6Q4G3 990 aa7.14□□□□□ -1.27
CLCN3-203ENST00000502998 DSTYKQ6XUX3 929 aa7.14□□□□□ -1.27
CLCN3-203ENST00000502998 ARHGEF18Q6ZSZ5 1173 aa7.14□□□□□ -1.27
CLCN3-203ENST00000502998 INTS8Q75QN2 995 aaKnown RBP7.14□□□□□ -1.27
CLCN3-203ENST00000502998 RASGRP2Q7LDG7 609 aa7.14□□□□□ -1.27
CLCN3-203ENST00000502998 GPR161Q8N6U8 529 aaKnown RBP7.14□□□□□ -1.27
CLCN3-203ENST00000502998 SCAIQ8N9R8 606 aa7.14□□□□□ -1.27
CLCN3-203ENST00000502998 TEX19Q8NA77 164 aa7.14□□□□□ -1.27
CLCN3-203ENST00000502998 RSAD2Q8WXG1 361 aa7.14□□□□□ -1.27
CLCN3-203ENST00000502998 KHSRPQ92945 711 aaKnown RBP eCLIP7.14□□□□□ -1.27
CLCN3-203ENST00000502998 GIMAP5Q96F15 307 aa7.14□□□□□ -1.27
CLCN3-203ENST00000502998 NRBF2Q96F24 287 aa7.14□□□□□ -1.27
CLCN3-203ENST00000502998 HNRNPABQ99729 332 aaKnown RBP7.14□□□□□ -1.27
CLCN3-203ENST00000502998 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.14□□□□□ -1.27
CLCN3-203ENST00000502998 PCDH11XQ9BZA7 1347 aa7.14□□□□□ -1.27
CLCN3-203ENST00000502998 PCDH11YQ9BZA8 1340 aa7.14□□□□□ -1.27
CLCN3-203ENST00000502998 PREBQ9HCU5 417 aa7.14□□□□□ -1.27
CLCN3-203ENST00000502998 VPS18Q9P253 973 aa7.14□□□□□ -1.27
CLCN3-203ENST00000502998 PGAP2Q9UHJ9 254 aa7.14□□□□□ -1.27
CLCN3-203ENST00000502998 EVLQ9UI08 416 aaPredicted RBP7.14□□□□□ -1.27
CLCN3-203ENST00000502998 CCNL1Q9UK58 526 aaPredicted RBP7.14□□□□□ -1.27
CLCN3-203ENST00000502998 FBXL5Q9UKA1 691 aa7.14□□□□□ -1.27
CLCN3-203ENST00000502998 ASB3Q9Y575 518 aa7.14□□□□□ -1.27
CLCN3-203ENST00000502998 TRIM17Q9Y577 477 aa7.14□□□□□ -1.27
CLCN3-203ENST00000502998 COL4A3BPQ9Y5P4 624 aa7.14□□□□□ -1.27
CLCN3-203ENST00000502998 PPP2R3BQ9Y5P8 575 aa7.14□□□□□ -1.27
CLCN3-203ENST00000502998 TACC3Q9Y6A5 838 aa7.14□□□□□ -1.27
CLCN3-203ENST00000502998 SLC4A7Q9Y6M7 1214 aa7.14□□□□□ -1.27
CLCN3-203ENST00000502998 PKD1L3Q7Z443 1732 aa7.13□□□□□ -1.27
CLCN3-203ENST00000502998 TOGARAM1Q9Y4F4 1720 aa7.13□□□□□ -1.27
CLCN3-203ENST00000502998 NCAPD2Q15021 1401 aa7.13□□□□□ -1.27
CLCN3-203ENST00000502998 CASQ2O14958 399 aaPredicted RBP7.13□□□□□ -1.27
CLCN3-203ENST00000502998 SHOX2O60902 331 aaPredicted RBP7.13□□□□□ -1.27
CLCN3-203ENST00000502998 BAIAP3O94812 1187 aa7.13□□□□□ -1.27
CLCN3-203ENST00000502998 PAHP00439 452 aa7.13□□□□□ -1.27
CLCN3-203ENST00000502998 KRT14P02533 472 aa7.13□□□□□ -1.27
CLCN3-203ENST00000502998 TUBBP07437 444 aa7.13□□□□□ -1.27
CLCN3-203ENST00000502998 EPS15P42566 896 aa7.13□□□□□ -1.27
CLCN3-203ENST00000502998 ACADVLP49748 655 aa7.13□□□□□ -1.27
CLCN3-203ENST00000502998 MTTPP55157 894 aa7.13□□□□□ -1.27
CLCN3-203ENST00000502998 AKAP17AQ02040 695 aaKnown RBP7.13□□□□□ -1.27
CLCN3-203ENST00000502998 APOBRQ0VD83 1088 aa7.13□□□□□ -1.27
CLCN3-203ENST00000502998 HSPA14Q0VDF9 509 aa7.13□□□□□ -1.27
CLCN3-203ENST00000502998 STK3Q13188 491 aa7.13□□□□□ -1.27
CLCN3-203ENST00000502998 SP140Q13342 867 aa7.13□□□□□ -1.27
CLCN3-203ENST00000502998 WDR43Q15061 677 aaKnown RBP eCLIP7.13□□□□□ -1.27
CLCN3-203ENST00000502998 SGSM1Q2NKQ1 1148 aa7.13□□□□□ -1.27
CLCN3-203ENST00000502998 PPP1R15BQ5SWA1 713 aa7.13□□□□□ -1.27
CLCN3-203ENST00000502998 NDUFAF5Q5TEU4 345 aa7.13□□□□□ -1.27
CLCN3-203ENST00000502998 MCTP1Q6DN14 999 aa7.13□□□□□ -1.27
CLCN3-203ENST00000502998 SLC2A7Q6PXP3 512 aa7.13□□□□□ -1.27
CLCN3-203ENST00000502998 CEP128Q6ZU80 1094 aa7.13□□□□□ -1.27
CLCN3-203ENST00000502998 ARHGAP27Q6ZUM4 889 aa7.13□□□□□ -1.27
CLCN3-203ENST00000502998 CKAP2LQ8IYA6 745 aa7.13□□□□□ -1.27
CLCN3-203ENST00000502998 VPS52Q8N1B4 723 aa7.13□□□□□ -1.27
CLCN3-203ENST00000502998 USP38Q8NB14 1042 aa7.13□□□□□ -1.27
CLCN3-203ENST00000502998 GOLM1Q8NBJ4 401 aa7.13□□□□□ -1.27
CLCN3-203ENST00000502998 HNRNPLLQ8WVV9 542 aaKnown RBP7.13□□□□□ -1.27
CLCN3-203ENST00000502998 IRGQQ8WZA9 623 aa7.13□□□□□ -1.27
CLCN3-203ENST00000502998 UBE2OQ9C0C9 1292 aaKnown RBP7.13□□□□□ -1.27
CLCN3-203ENST00000502998 LGR6Q9HBX8 967 aa7.13□□□□□ -1.27
CLCN3-203ENST00000502998 ZCCHC17Q9NP64 241 aaKnown RBP7.13□□□□□ -1.27
CLCN3-203ENST00000502998 ATAD3AQ9NVI7 634 aa7.13□□□□□ -1.27
CLCN3-203ENST00000502998 TBCCD1Q9NVR7 557 aa7.13□□□□□ -1.27
CLCN3-203ENST00000502998 TFCP2L1Q9NZI6 479 aa7.13□□□□□ -1.27
CLCN3-203ENST00000502998 PLA2G2EQ9NZK7 142 aa7.13□□□□□ -1.27
CLCN3-203ENST00000502998 PPP1R9AQ9ULJ8 1098 aa7.13□□□□□ -1.27
CLCN3-203ENST00000502998 MAP2P11137 1827 aaKnown RBP7.13□□□□□ -1.27
CLCN3-203ENST00000502998 CCDC151A5D8V7 595 aa7.12□□□□□ -1.27
CLCN3-203ENST00000502998 RASA4BC9J798 803 aa7.12□□□□□ -1.27
CLCN3-203ENST00000502998 TBX3O15119 743 aa7.12□□□□□ -1.27
CLCN3-203ENST00000502998 MEFVO15553 781 aaPredicted RBP7.12□□□□□ -1.27
CLCN3-203ENST00000502998 ASAP2O43150 1006 aa7.12□□□□□ -1.27
CLCN3-203ENST00000502998 RNF40O75150 1001 aa7.12□□□□□ -1.27
CLCN3-203ENST00000502998 TADA3O75528 432 aa7.12□□□□□ -1.27
CLCN3-203ENST00000502998 TCEA3O75764 348 aa7.12□□□□□ -1.27
CLCN3-203ENST00000502998 ALDH2P05091 517 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms