RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 CEP72Q9P209 647 aa8.16□□□□□ -1.1
PDGFC-203ENST00000502773 SAR1BQ9Y6B6 198 aa8.16□□□□□ -1.1
PDGFC-203ENST00000502773 A0A1B0GUL6 1792 aa8.16□□□□□ -1.1
PDGFC-203ENST00000502773 PDXKO00764 312 aa8.16□□□□□ -1.1
PDGFC-203ENST00000502773 RPA1P27694 616 aa8.16□□□□□ -1.1
PDGFC-203ENST00000502773 NCBP1Q09161 790 aaKnown RBP8.16□□□□□ -1.1
PDGFC-203ENST00000502773 FAM182BQ5T319 152 aa8.16□□□□□ -1.1
PDGFC-203ENST00000502773 RSBN1LQ6PCB5 846 aaPredicted RBP8.16□□□□□ -1.1
PDGFC-203ENST00000502773 NIPA1Q7RTP0 329 aa8.16□□□□□ -1.1
PDGFC-203ENST00000502773 DDX12PQ92771 950 aa8.16□□□□□ -1.1
PDGFC-203ENST00000502773 TMEM60Q9H2L4 133 aa8.16□□□□□ -1.1
PDGFC-203ENST00000502773 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.16□□□□□ -1.1
PDGFC-203ENST00000502773 ATRNL1Q5VV63 1379 aa8.16□□□□□ -1.1
PDGFC-203ENST00000502773 MYH2Q9UKX2 1941 aa8.16□□□□□ -1.1
PDGFC-203ENST00000502773 TMCO5BA8MYB1 307 aa8.16□□□□□ -1.1
PDGFC-203ENST00000502773 EIF3DO15371 548 aaKnown RBP eCLIP8.16□□□□□ -1.1
PDGFC-203ENST00000502773 BMP6P22004 513 aa8.16□□□□□ -1.1
PDGFC-203ENST00000502773 SREBF1P36956 1147 aa8.16□□□□□ -1.1
PDGFC-203ENST00000502773 EARS2Q5JPH6 523 aaKnown RBP8.16□□□□□ -1.1
PDGFC-203ENST00000502773 ICE2Q659A1 982 aa8.16□□□□□ -1.1
PDGFC-203ENST00000502773 SYCE1Q8N0S2 351 aa8.16□□□□□ -1.1
PDGFC-203ENST00000502773 MSL3Q8N5Y2 521 aaKnown RBP8.16□□□□□ -1.1
PDGFC-203ENST00000502773 STAMQ92783 540 aa8.16□□□□□ -1.1
PDGFC-203ENST00000502773 CDHR1Q96JP9 859 aa8.16□□□□□ -1.1
PDGFC-203ENST00000502773 CARD6Q9BX69 1037 aa8.16□□□□□ -1.1
PDGFC-203ENST00000502773 LZTFL1Q9NQ48 299 aa8.16□□□□□ -1.1
PDGFC-203ENST00000502773 KCNQ5Q9NR82 932 aa8.16□□□□□ -1.1
PDGFC-203ENST00000502773 EMILIN3Q9NT22 766 aa8.16□□□□□ -1.1
PDGFC-203ENST00000502773 ARMCX3Q9UH62 379 aaPredicted RBP8.16□□□□□ -1.1
PDGFC-203ENST00000502773 ODF2LQ9ULJ1 636 aa8.16□□□□□ -1.1
PDGFC-203ENST00000502773 JRKLQ9Y4A0 524 aa8.16□□□□□ -1.1
PDGFC-203ENST00000502773 MRFAP1Q9Y605 127 aa8.16□□□□□ -1.1
PDGFC-203ENST00000502773 ERLIN2O94905 339 aa8.15□□□□□ -1.1
PDGFC-203ENST00000502773 EYA4O95677 639 aa8.15□□□□□ -1.1
PDGFC-203ENST00000502773 PRLRP16471 622 aa8.15□□□□□ -1.1
PDGFC-203ENST00000502773 VAV2P52735 878 aa8.15□□□□□ -1.1
PDGFC-203ENST00000502773 MCM6Q14566 821 aa8.15□□□□□ -1.1
PDGFC-203ENST00000502773 SLC15A2Q16348 729 aa8.15□□□□□ -1.1
PDGFC-203ENST00000502773 TDRD12Q587J7 1177 aaKnown RBP8.15□□□□□ -1.1
PDGFC-203ENST00000502773 POTEDQ86YR6 584 aa8.15□□□□□ -1.1
PDGFC-203ENST00000502773 MTMR14Q8NCE2 650 aa8.15□□□□□ -1.1
PDGFC-203ENST00000502773 MKNK1Q9BUB5 465 aa8.15□□□□□ -1.1
PDGFC-203ENST00000502773 TMEM206Q9H813 350 aa8.15□□□□□ -1.1
PDGFC-203ENST00000502773 DBNDD1Q9H9R9 158 aa8.15□□□□□ -1.1
PDGFC-203ENST00000502773 KIAA1024Q9UPX6 916 aa8.15□□□□□ -1.1
PDGFC-203ENST00000502773 GDAQ9Y2T3 454 aa8.15□□□□□ -1.1
PDGFC-203ENST00000502773 FLOT1O75955 427 aa8.15□□□□□ -1.1
PDGFC-203ENST00000502773 SERPING1P05155 500 aa8.15□□□□□ -1.1
PDGFC-203ENST00000502773 NEFHP12036 1026 aa8.15□□□□□ -1.1
PDGFC-203ENST00000502773 ARID5BQ14865 1188 aa8.15□□□□□ -1.1
PDGFC-203ENST00000502773 HSP90AA4PQ58FG1 418 aa8.15□□□□□ -1.1
PDGFC-203ENST00000502773 SMYD5Q6GMV2 418 aa8.15□□□□□ -1.1
PDGFC-203ENST00000502773 PPP1R2P3Q6NXS1 205 aa8.15□□□□□ -1.1
PDGFC-203ENST00000502773 DYDC1Q8WWB3 177 aa8.15□□□□□ -1.1
PDGFC-203ENST00000502773 CEP89Q96ST8 783 aa8.15□□□□□ -1.1
PDGFC-203ENST00000502773 RUFY1Q96T51 708 aa8.15□□□□□ -1.1
PDGFC-203ENST00000502773 RIT2Q99578 217 aa8.15□□□□□ -1.1
PDGFC-203ENST00000502773 RNF216Q9NWF9 866 aaPredicted RBP8.15□□□□□ -1.1
PDGFC-203ENST00000502773 LARSQ9P2J5 1176 aaKnown RBP8.15□□□□□ -1.1
PDGFC-203ENST00000502773 USP17L10C9JJH3 530 aa8.15□□□□□ -1.11
PDGFC-203ENST00000502773 GAS7O60861 476 aa8.15□□□□□ -1.11
PDGFC-203ENST00000502773 XRCC5P13010 732 aaKnown RBP8.15□□□□□ -1.11
PDGFC-203ENST00000502773 MAGEA1P43355 309 aa8.15□□□□□ -1.11
PDGFC-203ENST00000502773 EIF6P56537 245 aaKnown RBP8.15□□□□□ -1.11
PDGFC-203ENST00000502773 GLE1Q53GS7 698 aaKnown RBP8.15□□□□□ -1.11
PDGFC-203ENST00000502773 GBP6Q6ZN66 633 aa8.15□□□□□ -1.11
PDGFC-203ENST00000502773 RDM1Q8NG50 284 aa8.15□□□□□ -1.11
PDGFC-203ENST00000502773 NAP1L3Q99457 506 aaPredicted RBP8.15□□□□□ -1.11
PDGFC-203ENST00000502773 NCAPGQ9BPX3 1015 aa8.15□□□□□ -1.11
PDGFC-203ENST00000502773 ZNRF3Q9ULT6 936 aa8.15□□□□□ -1.11
PDGFC-203ENST00000502773 SNED1Q8TER0 1413 aa8.15□□□□□ -1.11
PDGFC-203ENST00000502773 UBE2Q2LH0YL09 131 aa8.14□□□□□ -1.11
PDGFC-203ENST00000502773 MAFGO15525 162 aa8.14□□□□□ -1.11
PDGFC-203ENST00000502773 CD44P16070 742 aaKnown RBP8.14□□□□□ -1.11
PDGFC-203ENST00000502773 ADAM9Q13443 819 aa8.14□□□□□ -1.11
PDGFC-203ENST00000502773 ASIC2Q16515 512 aa8.14□□□□□ -1.11
PDGFC-203ENST00000502773 PRR16Q569H4 304 aa8.14□□□□□ -1.11
PDGFC-203ENST00000502773 NCAPH2Q6IBW4 605 aa8.14□□□□□ -1.11
PDGFC-203ENST00000502773 KCTD1Q719H9 257 aa8.14□□□□□ -1.11
PDGFC-203ENST00000502773 NLRX1Q86UT6 975 aa8.14□□□□□ -1.11
PDGFC-203ENST00000502773 MICALL1Q8N3F8 863 aa8.14□□□□□ -1.11
PDGFC-203ENST00000502773 HNRNPLLQ8WVV9 542 aaKnown RBP8.14□□□□□ -1.11
PDGFC-203ENST00000502773 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.14□□□□□ -1.111e-6■■■■■ 58.1
PDGFC-203ENST00000502773 MBOAT7Q96N66 472 aa8.14□□□□□ -1.11
PDGFC-203ENST00000502773 IFIH1Q9BYX4 1025 aaKnown RBP8.14□□□□□ -1.11
PDGFC-203ENST00000502773 HSD3B7Q9H2F3 369 aa8.14□□□□□ -1.11
PDGFC-203ENST00000502773 SLC39A2Q9NP94 309 aa8.14□□□□□ -1.11
PDGFC-203ENST00000502773 TBC1D22BQ9NU19 505 aa8.14□□□□□ -1.11
PDGFC-203ENST00000502773 TMX2Q9Y320 296 aa8.14□□□□□ -1.11
PDGFC-203ENST00000502773 A0A087WWV3 80 aa8.14□□□□□ -1.11
PDGFC-203ENST00000502773 A0A087X0B3 334 aa8.14□□□□□ -1.11
PDGFC-203ENST00000502773 ARHGEF35A5YM69 484 aa8.14□□□□□ -1.11
PDGFC-203ENST00000502773 PSMD14O00487 310 aa8.14□□□□□ -1.11
PDGFC-203ENST00000502773 TEX33O43247 280 aa8.14□□□□□ -1.11
PDGFC-203ENST00000502773 MAPTP10636 758 aaKnown RBP8.14□□□□□ -1.11
PDGFC-203ENST00000502773 HNRNPH3P31942 346 aaKnown RBP8.14□□□□□ -1.11
PDGFC-203ENST00000502773 NF2P35240 595 aa8.14□□□□□ -1.11
PDGFC-203ENST00000502773 CLK2P49760 499 aaKnown RBP8.14□□□□□ -1.11
PDGFC-203ENST00000502773 SMTNP53814 917 aa8.14□□□□□ -1.11
PDGFC-203ENST00000502773 TGFB2P61812 414 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms