RNA–Protein interactions for RNA: ENST00000502563.5

UBE2D3-212, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-212ENST00000502563 SP2Q02086 613 aa12.21□□□□□ -0.45
UBE2D3-212ENST00000502563 ORC2Q13416 577 aaPredicted RBP12.21□□□□□ -0.45
UBE2D3-212ENST00000502563 Q4G0T1 1027 aa12.21□□□□□ -0.45
UBE2D3-212ENST00000502563 JAKMIP3Q5VZ66 844 aa12.21□□□□□ -0.45
UBE2D3-212ENST00000502563 NFRKBQ6P4R8 1299 aa12.21□□□□□ -0.45
UBE2D3-212ENST00000502563 TBCKQ8TEA7 893 aa12.21□□□□□ -0.45
UBE2D3-212ENST00000502563 LENG9Q96B70 501 aa12.21□□□□□ -0.45
UBE2D3-212ENST00000502563 MTG1Q9BT17 334 aaPredicted RBP12.21□□□□□ -0.45
UBE2D3-212ENST00000502563 SENP6Q9GZR1 1112 aaPredicted RBP12.21□□□□□ -0.45
UBE2D3-212ENST00000502563 FOXP1Q9H334 677 aaPredicted RBP12.21□□□□□ -0.45
UBE2D3-212ENST00000502563 STARD7Q9NQZ5 370 aa12.21□□□□□ -0.45
UBE2D3-212ENST00000502563 TBC1D22BQ9NU19 505 aa12.21□□□□□ -0.45
UBE2D3-212ENST00000502563 TMEM260Q9NX78 707 aa12.21□□□□□ -0.45
UBE2D3-212ENST00000502563 PDE4DIPQ5VU43 2346 aa12.21□□□□□ -0.46
UBE2D3-212ENST00000502563 HAS3O00219 553 aa12.2□□□□□ -0.46
UBE2D3-212ENST00000502563 TBX3O15119 743 aa12.2□□□□□ -0.46
UBE2D3-212ENST00000502563 EDIL3O43854 480 aa12.2□□□□□ -0.46
UBE2D3-212ENST00000502563 PPFIA3O75145 1194 aa12.2□□□□□ -0.46
UBE2D3-212ENST00000502563 PDIA4P13667 645 aaKnown RBP12.2□□□□□ -0.46
UBE2D3-212ENST00000502563 SAFBQ15424 915 aaKnown RBP eCLIP12.2□□□□□ -0.46
UBE2D3-212ENST00000502563 HSDL1Q3SXM5 330 aa12.2□□□□□ -0.46
UBE2D3-212ENST00000502563 TMEM63BQ5T3F8 832 aa12.2□□□□□ -0.46
UBE2D3-212ENST00000502563 KRT40Q6A162 431 aa12.2□□□□□ -0.46
UBE2D3-212ENST00000502563 AFG1LQ8WV93 481 aa12.2□□□□□ -0.46
UBE2D3-212ENST00000502563 C8orf76Q96K31 380 aa12.2□□□□□ -0.46
UBE2D3-212ENST00000502563 RIT2Q99578 217 aa12.2□□□□□ -0.46
UBE2D3-212ENST00000502563 MLXIPQ9HAP2 919 aa12.2□□□□□ -0.46
UBE2D3-212ENST00000502563 AGO4Q9HCK5 861 aaKnown RBP12.2□□□□□ -0.46
UBE2D3-212ENST00000502563 RTEL1Q9NZ71 1219 aa12.2□□□□□ -0.46
UBE2D3-212ENST00000502563 NR2E3Q9Y5X4 410 aa12.2□□□□□ -0.46
UBE2D3-212ENST00000502563 ALPK3Q96L96 1907 aa12.19□□□□□ -0.46
UBE2D3-212ENST00000502563 EMSYQ7Z589 1322 aa12.19□□□□□ -0.46
UBE2D3-212ENST00000502563 CCDC194A0A1B0GVG4 234 aa12.19□□□□□ -0.46
UBE2D3-212ENST00000502563 K7ELQ4 463 aaPredicted RBP12.19□□□□□ -0.46
UBE2D3-212ENST00000502563 ARVCFO00192 962 aa12.19□□□□□ -0.46
UBE2D3-212ENST00000502563 ATG7O95352 703 aa12.19□□□□□ -0.46
UBE2D3-212ENST00000502563 U2AF2P26368 475 aaKnown RBP eCLIP12.19□□□□□ -0.465e-9■■■□□ 15.4
UBE2D3-212ENST00000502563 TRAPPC10P48553 1259 aa12.19□□□□□ -0.46
UBE2D3-212ENST00000502563 LRRC26Q2I0M4 334 aa12.19□□□□□ -0.46
UBE2D3-212ENST00000502563 NEK8Q86SG6 692 aa12.19□□□□□ -0.46
UBE2D3-212ENST00000502563 DIS3L2Q8IYB7 885 aaKnown RBP12.19□□□□□ -0.46
UBE2D3-212ENST00000502563 FAM184AQ8NB25 1140 aa12.19□□□□□ -0.46
UBE2D3-212ENST00000502563 COPS5Q92905 334 aa12.19□□□□□ -0.46
UBE2D3-212ENST00000502563 SPATA33Q96N06 139 aa12.19□□□□□ -0.46
UBE2D3-212ENST00000502563 GPR20Q99678 358 aa12.19□□□□□ -0.46
UBE2D3-212ENST00000502563 KCNJ14Q9UNX9 436 aa12.19□□□□□ -0.46
UBE2D3-212ENST00000502563 IGKV6D-21A0A0A0MT36 114 aa12.18□□□□□ -0.46
UBE2D3-212ENST00000502563 IPO5O00410 1097 aaKnown RBP12.18□□□□□ -0.46
UBE2D3-212ENST00000502563 ADAMTS3O15072 1205 aa12.18□□□□□ -0.46
UBE2D3-212ENST00000502563 DHX15O43143 795 aaKnown RBP12.18□□□□□ -0.46
UBE2D3-212ENST00000502563 EVI5O60447 810 aa12.18□□□□□ -0.46
UBE2D3-212ENST00000502563 ATP9AO75110 1047 aa12.18□□□□□ -0.46
UBE2D3-212ENST00000502563 HOXC8P31273 242 aa12.18□□□□□ -0.46
UBE2D3-212ENST00000502563 ZNF76P36508 570 aa12.18□□□□□ -0.46
UBE2D3-212ENST00000502563 SLC26A2P50443 739 aa12.18□□□□□ -0.46
UBE2D3-212ENST00000502563 BEX3Q00994 111 aa12.18□□□□□ -0.46
UBE2D3-212ENST00000502563 ZNF746Q6NUN9 644 aaPredicted RBP12.18□□□□□ -0.46
UBE2D3-212ENST00000502563 CXCL17Q6UXB2 119 aa12.18□□□□□ -0.46
UBE2D3-212ENST00000502563 CYFIP1Q7L576 1253 aa12.18□□□□□ -0.46
UBE2D3-212ENST00000502563 PLA2G4DQ86XP0 818 aa12.18□□□□□ -0.46
UBE2D3-212ENST00000502563 FAM126BQ8IXS8 530 aa12.18□□□□□ -0.46
UBE2D3-212ENST00000502563 SMAP1Q8IYB5 467 aaPredicted RBP12.18□□□□□ -0.46
UBE2D3-212ENST00000502563 RDM1Q8NG50 284 aa12.18□□□□□ -0.46
UBE2D3-212ENST00000502563 CYP2W1Q8TAV3 490 aa12.18□□□□□ -0.46
UBE2D3-212ENST00000502563 RASGRP4Q8TDF6 673 aa12.18□□□□□ -0.46
UBE2D3-212ENST00000502563 SEPT1Q8WYJ6 367 aa12.18□□□□□ -0.46
UBE2D3-212ENST00000502563 KAT2BQ92831 832 aa12.18□□□□□ -0.46
UBE2D3-212ENST00000502563 PGBD1Q96JS3 809 aa12.18□□□□□ -0.46
UBE2D3-212ENST00000502563 SDF4Q9BRK5 362 aa12.18□□□□□ -0.46
UBE2D3-212ENST00000502563 C16orf70Q9BSU1 422 aa12.18□□□□□ -0.46
UBE2D3-212ENST00000502563 JPH1Q9HDC5 661 aaPredicted RBP12.18□□□□□ -0.46
UBE2D3-212ENST00000502563 SLC9A2Q9UBY0 812 aa12.18□□□□□ -0.46
UBE2D3-212ENST00000502563 TNRC18O15417 2968 aaPredicted RBP12.18□□□□□ -0.46
UBE2D3-212ENST00000502563 GRIN2DO15399 1336 aa12.17□□□□□ -0.46
UBE2D3-212ENST00000502563 BTBD18B2RXH4 712 aa12.17□□□□□ -0.46
UBE2D3-212ENST00000502563 NOP56O00567 594 aaKnown RBP12.17□□□□□ -0.46
UBE2D3-212ENST00000502563 LGR5O75473 907 aa12.17□□□□□ -0.46
UBE2D3-212ENST00000502563 CD4P01730 458 aa12.17□□□□□ -0.46
UBE2D3-212ENST00000502563 SUPT20HL2P0C7V6 817 aa12.17□□□□□ -0.46
UBE2D3-212ENST00000502563 ARP10275 920 aa12.17□□□□□ -0.46
UBE2D3-212ENST00000502563 PDCP20941 246 aa12.17□□□□□ -0.46
UBE2D3-212ENST00000502563 RTP1P59025 263 aa12.17□□□□□ -0.46
UBE2D3-212ENST00000502563 KRT76Q01546 638 aa12.17□□□□□ -0.46
UBE2D3-212ENST00000502563 ITGB3BPQ13352 177 aaPredicted RBP12.17□□□□□ -0.46
UBE2D3-212ENST00000502563 ITGA7Q13683 1181 aa12.17□□□□□ -0.46
UBE2D3-212ENST00000502563 B3GNT9Q6UX72 402 aa12.17□□□□□ -0.46
UBE2D3-212ENST00000502563 ETNPPLQ8TBG4 499 aa12.17□□□□□ -0.46
UBE2D3-212ENST00000502563 OXER1Q8TDS5 423 aa12.17□□□□□ -0.46
UBE2D3-212ENST00000502563 TNPO1Q92973 898 aaKnown RBP12.17□□□□□ -0.46
UBE2D3-212ENST00000502563 FAM20AQ96MK3 541 aa12.17□□□□□ -0.46
UBE2D3-212ENST00000502563 KCNMB3Q9NPA1 279 aa12.17□□□□□ -0.46
UBE2D3-212ENST00000502563 ZNF215Q9UL58 517 aaPredicted RBP12.17□□□□□ -0.46
UBE2D3-212ENST00000502563 DCDC2CA8MYV0 355 aa12.16□□□□□ -0.46
UBE2D3-212ENST00000502563 KIAA0355O15063 1070 aa12.16□□□□□ -0.46
UBE2D3-212ENST00000502563 LGALS2P05162 132 aa12.16□□□□□ -0.46
UBE2D3-212ENST00000502563 RPLP2P05387 115 aaKnown RBP12.16□□□□□ -0.46
UBE2D3-212ENST00000502563 GJB2P29033 226 aa12.16□□□□□ -0.46
UBE2D3-212ENST00000502563 SFNP31947 248 aa12.16□□□□□ -0.46
UBE2D3-212ENST00000502563 IRX5P78411 483 aaPredicted RBP12.16□□□□□ -0.46
UBE2D3-212ENST00000502563 RBL2Q08999 1139 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms