RNA–Protein interactions for RNA: ENST00000498804.1

TRBVA-201, Transcript of T cell receptor beta variable A (pseudogene), humanhuman

BASIC

Gene TRBVA, Length 316 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBVA-201ENST00000498804 LBX2Q6XYB7 198 aa4.53□□□□□ -1.68
TRBVA-201ENST00000498804 TRIM48Q8IWZ4 208 aa4.53□□□□□ -1.68
TRBVA-201ENST00000498804 PIP4K2CQ8TBX8 421 aa4.53□□□□□ -1.68
TRBVA-201ENST00000498804 PMFBP1Q8TBY8 1022 aa4.53□□□□□ -1.68
TRBVA-201ENST00000498804 DEPDC7Q96QD5 511 aa4.53□□□□□ -1.68
TRBVA-201ENST00000498804 ZFYVE21Q9BQ24 234 aa4.53□□□□□ -1.68
TRBVA-201ENST00000498804 KRTAP4-5Q9BYR2 181 aa4.53□□□□□ -1.68
TRBVA-201ENST00000498804 CCDC113Q9H0I3 377 aa4.53□□□□□ -1.68
TRBVA-201ENST00000498804 KANSL2Q9H9L4 492 aa4.53□□□□□ -1.68
TRBVA-201ENST00000498804 TCRBV5S4A2TA0A5A2 114 aa4.52□□□□□ -1.69
TRBVA-201ENST00000498804 K7ESM1 405 aa4.52□□□□□ -1.69
TRBVA-201ENST00000498804 NKRFO15226 690 aaKnown RBP eCLIP4.52□□□□□ -1.69
TRBVA-201ENST00000498804 ADRB1P08588 477 aa4.52□□□□□ -1.69
TRBVA-201ENST00000498804 COL6A2P12110 1019 aa4.52□□□□□ -1.69
TRBVA-201ENST00000498804 ITGA1P56199 1179 aa4.52□□□□□ -1.69
TRBVA-201ENST00000498804 EFEMP1Q12805 493 aa4.52□□□□□ -1.69
TRBVA-201ENST00000498804 ADAM9Q13443 819 aa4.52□□□□□ -1.69
TRBVA-201ENST00000498804 HABP4Q5JVS0 413 aaKnown RBP4.52□□□□□ -1.69
TRBVA-201ENST00000498804 LCE5AQ5TCM9 118 aa4.52□□□□□ -1.69
TRBVA-201ENST00000498804 PROSER1Q86XN7 944 aa4.52□□□□□ -1.69
TRBVA-201ENST00000498804 LGI4Q8N135 537 aa4.52□□□□□ -1.69
TRBVA-201ENST00000498804 LRRC47Q8N1G4 583 aaKnown RBP4.52□□□□□ -1.69
TRBVA-201ENST00000498804 ZBTB38Q8NAP3 1195 aaPredicted RBP4.52□□□□□ -1.69
TRBVA-201ENST00000498804 DCAF4Q8WV16 495 aa4.52□□□□□ -1.69
TRBVA-201ENST00000498804 CLIC6Q96NY7 704 aa4.52□□□□□ -1.69
TRBVA-201ENST00000498804 TMEM209Q96SK2 561 aa4.52□□□□□ -1.69
TRBVA-201ENST00000498804 SMOC1Q9H4F8 434 aa4.52□□□□□ -1.69
TRBVA-201ENST00000498804 HSPBP1Q9NZL4 362 aa4.52□□□□□ -1.69
TRBVA-201ENST00000498804 SIRPGQ9P1W8 387 aa4.52□□□□□ -1.69
TRBVA-201ENST00000498804 KDM2BQ8NHM5 1336 aa4.51□□□□□ -1.69
TRBVA-201ENST00000498804 MROH6A6NGR9 719 aa4.51□□□□□ -1.69
TRBVA-201ENST00000498804 C9orf118A6NHY6 69 aa4.51□□□□□ -1.69
TRBVA-201ENST00000498804 SLC27A2O14975 620 aa4.51□□□□□ -1.69
TRBVA-201ENST00000498804 PRICKLE3O43900 615 aaPredicted RBP4.51□□□□□ -1.69
TRBVA-201ENST00000498804 LRG1P02750 347 aa4.51□□□□□ -1.69
TRBVA-201ENST00000498804 GRK2P25098 689 aa4.51□□□□□ -1.69
TRBVA-201ENST00000498804 CNR2P34972 360 aa4.51□□□□□ -1.69
TRBVA-201ENST00000498804 GRK3P35626 688 aa4.51□□□□□ -1.69
TRBVA-201ENST00000498804 SURF1Q15526 300 aa4.51□□□□□ -1.69
TRBVA-201ENST00000498804 KIZQ2M2Z5 673 aa4.51□□□□□ -1.69
TRBVA-201ENST00000498804 RGL3Q3MIN7 710 aa4.51□□□□□ -1.69
TRBVA-201ENST00000498804 PHF19Q5T6S3 580 aa4.51□□□□□ -1.69
TRBVA-201ENST00000498804 NBPF6Q5VWK0 638 aa4.51□□□□□ -1.69
TRBVA-201ENST00000498804 FSTL4Q6MZW2 842 aa4.51□□□□□ -1.69
TRBVA-201ENST00000498804 PLEKHH3Q7Z736 793 aa4.51□□□□□ -1.69
TRBVA-201ENST00000498804 LILRB2Q8N423 598 aa4.51□□□□□ -1.69
TRBVA-201ENST00000498804 TTLL11Q8NHH1 800 aa4.51□□□□□ -1.69
TRBVA-201ENST00000498804 SH3RF2Q8TEC5 729 aa4.51□□□□□ -1.69
TRBVA-201ENST00000498804 CLEC4DQ8WXI8 215 aa4.51□□□□□ -1.69
TRBVA-201ENST00000498804 KISS1RQ969F8 398 aaPredicted RBP4.51□□□□□ -1.69
TRBVA-201ENST00000498804 ARMC5Q96C12 935 aa4.51□□□□□ -1.69
TRBVA-201ENST00000498804 NBPF4Q96M43 638 aa4.51□□□□□ -1.69
TRBVA-201ENST00000498804 ZSWIM3Q96MP5 696 aa4.51□□□□□ -1.69
TRBVA-201ENST00000498804 DNAJC7Q99615 494 aa4.51□□□□□ -1.69
TRBVA-201ENST00000498804 KCNJ15Q99712 375 aa4.51□□□□□ -1.69
TRBVA-201ENST00000498804 IPPKQ9H8X2 491 aa4.51□□□□□ -1.69
TRBVA-201ENST00000498804 SLC6A20Q9NP91 592 aa4.51□□□□□ -1.69
TRBVA-201ENST00000498804 MYOTQ9UBF9 498 aa4.51□□□□□ -1.69
TRBVA-201ENST00000498804 TRBV23-1A0A0A0MS06 115 aa4.5□□□□□ -1.69
TRBVA-201ENST00000498804 U2SURPO15042 1029 aaKnown RBP4.5□□□□□ -1.69
TRBVA-201ENST00000498804 GPR85P60893 370 aa4.5□□□□□ -1.69
TRBVA-201ENST00000498804 GRIN1Q05586 938 aa4.5□□□□□ -1.69
TRBVA-201ENST00000498804 SPIRE1Q08AE8 756 aa4.5□□□□□ -1.69
TRBVA-201ENST00000498804 IFRD2Q12894 506 aaPredicted RBP4.5□□□□□ -1.69
TRBVA-201ENST00000498804 ZNF827Q17R98 1081 aa4.5□□□□□ -1.69
TRBVA-201ENST00000498804 PRR31Q5SQ13 230 aa4.5□□□□□ -1.69
TRBVA-201ENST00000498804 TEPPQ6URK8 271 aa4.5□□□□□ -1.69
TRBVA-201ENST00000498804 OTOP3Q7RTS5 596 aa4.5□□□□□ -1.69
TRBVA-201ENST00000498804 FERMT3Q86UX7 667 aa4.5□□□□□ -1.69
TRBVA-201ENST00000498804 LCORQ96JN0 433 aaPredicted RBP4.5□□□□□ -1.69
TRBVA-201ENST00000498804 KRTAP9-3Q9BYQ3 159 aa4.5□□□□□ -1.69
TRBVA-201ENST00000498804 ASH2LQ9UBL3 628 aa4.5□□□□□ -1.69
TRBVA-201ENST00000498804 PPP1R1BQ9UD71 204 aaPredicted RBP4.5□□□□□ -1.69
TRBVA-201ENST00000498804 MRPS23Q9Y3D9 190 aaKnown RBP4.5□□□□□ -1.69
TRBVA-201ENST00000498804 DUSP10Q9Y6W6 482 aa4.5□□□□□ -1.69
TRBVA-201ENST00000498804 PLATP00750 562 aa4.49□□□□□ -1.69
TRBVA-201ENST00000498804 SOD2P04179 222 aa4.49□□□□□ -1.69
TRBVA-201ENST00000498804 ITGB3P05106 788 aa4.49□□□□□ -1.69
TRBVA-201ENST00000498804 PRAMEF18Q5VWM3 479 aa4.49□□□□□ -1.69
TRBVA-201ENST00000498804 IFNL3Q8IZI9 196 aa4.49□□□□□ -1.69
TRBVA-201ENST00000498804 JMYQ8N9B5 988 aa4.49□□□□□ -1.69
TRBVA-201ENST00000498804 TXNDC5Q8NBS9 432 aaKnown RBP4.49□□□□□ -1.69
TRBVA-201ENST00000498804 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.49□□□□□ -1.69
TRBVA-201ENST00000498804 DDX1Q92499 740 aaKnown RBP4.49□□□□□ -1.69
TRBVA-201ENST00000498804 SRPK1Q96SB4 655 aaKnown RBP4.49□□□□□ -1.69
TRBVA-201ENST00000498804 HIRIP3Q9BW71 556 aaPredicted RBP4.49□□□□□ -1.69
TRBVA-201ENST00000498804 CD244Q9BZW8 370 aa4.49□□□□□ -1.69
TRBVA-201ENST00000498804 L2HGDHQ9H9P8 463 aa4.49□□□□□ -1.69
TRBVA-201ENST00000498804 SLC52A2Q9HAB3 445 aa4.49□□□□□ -1.69
TRBVA-201ENST00000498804 DDX3XO00571 662 aaKnown RBP eCLIP4.48□□□□□ -1.69
TRBVA-201ENST00000498804 CYP1A1P04798 512 aaPredicted RBP4.48□□□□□ -1.69
TRBVA-201ENST00000498804 CHGBP05060 677 aa4.48□□□□□ -1.69
TRBVA-201ENST00000498804 ZNF28P17035 718 aa4.48□□□□□ -1.69
TRBVA-201ENST00000498804 KRTAP10-2P60368 255 aa4.48□□□□□ -1.69
TRBVA-201ENST00000498804 TM4SF20Q53R12 229 aa4.48□□□□□ -1.69
TRBVA-201ENST00000498804 MCTP2Q6DN12 878 aa4.48□□□□□ -1.69
TRBVA-201ENST00000498804 TMC5Q6UXY8 1006 aa4.48□□□□□ -1.69
TRBVA-201ENST00000498804 TTC9BQ8N6N2 239 aa4.48□□□□□ -1.69
TRBVA-201ENST00000498804 PCDH19Q8TAB3 1148 aa4.48□□□□□ -1.69
TRBVA-201ENST00000498804 UHMK1Q8TAS1 419 aaKnown RBP4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms