RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 TBC1D7Q9P0N9 293 aa6.36□□□□□ -1.39
SOX2-OT-218ENST00000498731 KCPQ6ZWJ8 1503 aa6.36□□□□□ -1.39
SOX2-OT-218ENST00000498731 MRC1P22897 1456 aa6.36□□□□□ -1.39
SOX2-OT-218ENST00000498731 PTPDC1A2A3K4 754 aa6.36□□□□□ -1.39
SOX2-OT-218ENST00000498731 EVI5O60447 810 aa6.36□□□□□ -1.39
SOX2-OT-218ENST00000498731 PDCP20941 246 aa6.36□□□□□ -1.39
SOX2-OT-218ENST00000498731 YY1P25490 414 aa6.36□□□□□ -1.39
SOX2-OT-218ENST00000498731 CASP1P29466 404 aa6.36□□□□□ -1.39
SOX2-OT-218ENST00000498731 CASP14P31944 242 aa6.36□□□□□ -1.39
SOX2-OT-218ENST00000498731 POLE2P56282 527 aa6.36□□□□□ -1.39
SOX2-OT-218ENST00000498731 PLOD1Q02809 727 aaPredicted RBP6.36□□□□□ -1.39
SOX2-OT-218ENST00000498731 XRCC4Q13426 336 aa6.36□□□□□ -1.39
SOX2-OT-218ENST00000498731 TMEM67Q5HYA8 995 aa6.36□□□□□ -1.39
SOX2-OT-218ENST00000498731 B4GALNT4Q76KP1 1039 aa6.36□□□□□ -1.39
SOX2-OT-218ENST00000498731 EFCAB3Q8N7B9 438 aa6.36□□□□□ -1.39
SOX2-OT-218ENST00000498731 TEKT4Q8WW24 435 aa6.36□□□□□ -1.39
SOX2-OT-218ENST00000498731 RSPH1Q8WYR4 309 aa6.36□□□□□ -1.39
SOX2-OT-218ENST00000498731 MRPS27Q92552 414 aaKnown RBP6.36□□□□□ -1.39
SOX2-OT-218ENST00000498731 NAPGQ99747 312 aaPredicted RBP6.36□□□□□ -1.39
SOX2-OT-218ENST00000498731 TM6SF1Q9BZW5 370 aa6.36□□□□□ -1.39
SOX2-OT-218ENST00000498731 NYXQ9GZU5 481 aa6.36□□□□□ -1.39
SOX2-OT-218ENST00000498731 HOMER3Q9NSC5 361 aa6.36□□□□□ -1.39
SOX2-OT-218ENST00000498731 NKX1-2Q9UD57 310 aaPredicted RBP6.36□□□□□ -1.39
SOX2-OT-218ENST00000498731 ANAPC4Q9UJX5 808 aa6.36□□□□□ -1.39
SOX2-OT-218ENST00000498731 USP54Q70EL1 1684 aa6.36□□□□□ -1.39
SOX2-OT-218ENST00000498731 MYH10P35580 1976 aa6.35□□□□□ -1.39
SOX2-OT-218ENST00000498731 COL22A1Q8NFW1 1626 aaPredicted RBP6.35□□□□□ -1.39
SOX2-OT-218ENST00000498731 GOLGA6L7A0A1B0GV03 622 aa6.35□□□□□ -1.39
SOX2-OT-218ENST00000498731 KIF28PB7ZC32 967 aa6.35□□□□□ -1.39
SOX2-OT-218ENST00000498731 N4BP3O15049 544 aa6.35□□□□□ -1.39
SOX2-OT-218ENST00000498731 CCP110O43303 1012 aa6.35□□□□□ -1.39
SOX2-OT-218ENST00000498731 KIF5CO60282 957 aa6.35□□□□□ -1.39
SOX2-OT-218ENST00000498731 PFKFB1P16118 471 aa6.35□□□□□ -1.39
SOX2-OT-218ENST00000498731 CXCR5P32302 372 aa6.35□□□□□ -1.39
SOX2-OT-218ENST00000498731 ADD2P35612 726 aa6.35□□□□□ -1.39
SOX2-OT-218ENST00000498731 MDM2Q00987 491 aaPredicted RBP6.35□□□□□ -1.39
SOX2-OT-218ENST00000498731 ROR2Q01974 943 aaKnown RBP6.35□□□□□ -1.39
SOX2-OT-218ENST00000498731 YTHDF3Q7Z739 585 aaKnown RBP6.35□□□□□ -1.39
SOX2-OT-218ENST00000498731 FCHSD1Q86WN1 690 aa6.35□□□□□ -1.39
SOX2-OT-218ENST00000498731 COL23A1Q86Y22 540 aaPredicted RBP6.35□□□□□ -1.39
SOX2-OT-218ENST00000498731 LCORLQ8N3X6 602 aa6.35□□□□□ -1.39
SOX2-OT-218ENST00000498731 UCMAQ8WVF2 138 aa6.35□□□□□ -1.39
SOX2-OT-218ENST00000498731 SLC35B4Q969S0 331 aa6.35□□□□□ -1.39
SOX2-OT-218ENST00000498731 ALS2CR12Q96Q35 445 aa6.35□□□□□ -1.39
SOX2-OT-218ENST00000498731 PLA2G12BQ9BX93 195 aa6.35□□□□□ -1.39
SOX2-OT-218ENST00000498731 ZFATQ9P243 1243 aa6.35□□□□□ -1.39
SOX2-OT-218ENST00000498731 NARFQ9UHQ1 456 aa6.35□□□□□ -1.39
SOX2-OT-218ENST00000498731 MINPP1Q9UNW1 487 aa6.35□□□□□ -1.39
SOX2-OT-218ENST00000498731 ZNF510Q9Y2H8 683 aa6.35□□□□□ -1.39
SOX2-OT-218ENST00000498731 AFDNP55196 1824 aaKnown RBP6.35□□□□□ -1.39
SOX2-OT-218ENST00000498731 ATXN2Q99700 1313 aaKnown RBP6.35□□□□□ -1.39
SOX2-OT-218ENST00000498731 hCG_1642624A0A1W2PR95 340 aa6.35□□□□□ -1.39
SOX2-OT-218ENST00000498731 HGSO14964 777 aaPredicted RBP6.35□□□□□ -1.39
SOX2-OT-218ENST00000498731 GFPT2O94808 682 aa6.35□□□□□ -1.39
SOX2-OT-218ENST00000498731 HIBADHP31937 336 aaKnown RBP6.35□□□□□ -1.39
SOX2-OT-218ENST00000498731 RFC5P40937 340 aa6.35□□□□□ -1.39
SOX2-OT-218ENST00000498731 NFIXQ14938 502 aa6.35□□□□□ -1.39
SOX2-OT-218ENST00000498731 SPECC1LQ69YQ0 1117 aa6.35□□□□□ -1.39
SOX2-OT-218ENST00000498731 PPP1R18Q6NYC8 613 aa6.35□□□□□ -1.39
SOX2-OT-218ENST00000498731 TRAPPC11Q7Z392 1133 aa6.35□□□□□ -1.39
SOX2-OT-218ENST00000498731 METTL16Q86W50 562 aaKnown RBP6.35□□□□□ -1.39
SOX2-OT-218ENST00000498731 MFN1Q8IWA4 741 aa6.35□□□□□ -1.39
SOX2-OT-218ENST00000498731 GALNT15Q8N3T1 639 aa6.35□□□□□ -1.39
SOX2-OT-218ENST00000498731 HVCN1Q96D96 273 aa6.35□□□□□ -1.39
SOX2-OT-218ENST00000498731 BPIFA3Q9BQP9 254 aa6.35□□□□□ -1.39
SOX2-OT-218ENST00000498731 DSCC1Q9BVC3 393 aa6.35□□□□□ -1.39
SOX2-OT-218ENST00000498731 NDST4Q9H3R1 872 aa6.35□□□□□ -1.39
SOX2-OT-218ENST00000498731 SUDS3Q9H7L9 328 aaPredicted RBP6.35□□□□□ -1.39
SOX2-OT-218ENST00000498731 ZMIZ1Q9ULJ6 1067 aa6.35□□□□□ -1.39
SOX2-OT-218ENST00000498731 NUB1Q9Y5A7 615 aa6.35□□□□□ -1.39
SOX2-OT-218ENST00000498731 MYH1P12882 1939 aa6.35□□□□□ -1.39
SOX2-OT-218ENST00000498731 N4BP2Q86UW6 1770 aaPredicted RBP6.35□□□□□ -1.39
SOX2-OT-218ENST00000498731 MAGEB6P1A0A0J9YX57 407 aa6.34□□□□□ -1.39
SOX2-OT-218ENST00000498731 PALM3A6NDB9 673 aaPredicted RBP6.34□□□□□ -1.39
SOX2-OT-218ENST00000498731 NEFHP12036 1026 aa6.34□□□□□ -1.39
SOX2-OT-218ENST00000498731 CA8P35219 290 aa6.34□□□□□ -1.39
SOX2-OT-218ENST00000498731 GCLCP48506 637 aaPredicted RBP6.34□□□□□ -1.39
SOX2-OT-218ENST00000498731 CD151P48509 253 aa6.34□□□□□ -1.39
SOX2-OT-218ENST00000498731 RASA3Q14644 834 aa6.34□□□□□ -1.39
SOX2-OT-218ENST00000498731 FAM133BQ5BKY9 247 aaKnown RBP6.34□□□□□ -1.39
SOX2-OT-218ENST00000498731 MFSD6Q6ZSS7 791 aa6.34□□□□□ -1.39
SOX2-OT-218ENST00000498731 CCDC121Q6ZUS5 278 aa6.34□□□□□ -1.39
SOX2-OT-218ENST00000498731 APTXQ7Z2E3 356 aaKnown RBP6.34□□□□□ -1.39
SOX2-OT-218ENST00000498731 LONP2Q86WA8 852 aa6.34□□□□□ -1.39
SOX2-OT-218ENST00000498731 CCDC148Q8NFR7 591 aa6.34□□□□□ -1.39
SOX2-OT-218ENST00000498731 MAGEC3Q8TD91 643 aa6.34□□□□□ -1.39
SOX2-OT-218ENST00000498731 CCT6BQ92526 530 aa6.34□□□□□ -1.39
SOX2-OT-218ENST00000498731 PHKBQ93100 1093 aa6.34□□□□□ -1.39
SOX2-OT-218ENST00000498731 SEC16BQ96JE7 1060 aa6.34□□□□□ -1.39
SOX2-OT-218ENST00000498731 SRPK1Q96SB4 655 aaKnown RBP6.34□□□□□ -1.39
SOX2-OT-218ENST00000498731 SENP7Q9BQF6 1050 aa6.34□□□□□ -1.39
SOX2-OT-218ENST00000498731 UBAC1Q9BSL1 405 aa6.34□□□□□ -1.39
SOX2-OT-218ENST00000498731 SYT17Q9BSW7 474 aa6.34□□□□□ -1.39
SOX2-OT-218ENST00000498731 PPP1R12CQ9BZL4 782 aa6.34□□□□□ -1.39
SOX2-OT-218ENST00000498731 KCNMB3Q9NPA1 279 aa6.34□□□□□ -1.39
SOX2-OT-218ENST00000498731 GALNT8Q9NY28 637 aa6.34□□□□□ -1.39
SOX2-OT-218ENST00000498731 WDR35Q9P2L0 1181 aa6.34□□□□□ -1.39
SOX2-OT-218ENST00000498731 SPDYE2BA6NHP3 402 aa6.34□□□□□ -1.39
SOX2-OT-218ENST00000498731 PPIP5K2O43314 1243 aa6.34□□□□□ -1.39
SOX2-OT-218ENST00000498731 GPR37L1O60883 481 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms