RNA–Protein interactions for RNA: ENST00000497758.1

MRPL55-234, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-234ENST00000497758 KCNA2P16389 499 aa13.36□□□□□ -0.27
MRPL55-234ENST00000497758 MAGEA10P43363 369 aaPredicted RBP13.36□□□□□ -0.27
MRPL55-234ENST00000497758 SETQ01105 290 aaPredicted RBP13.36□□□□□ -0.27
MRPL55-234ENST00000497758 FAAP100Q0VG06 881 aa13.36□□□□□ -0.27
MRPL55-234ENST00000497758 NFRKBQ6P4R8 1299 aa13.36□□□□□ -0.27
MRPL55-234ENST00000497758 NIPA1Q7RTP0 329 aa13.36□□□□□ -0.27
MRPL55-234ENST00000497758 KRT25Q7Z3Z0 450 aa13.36□□□□□ -0.27
MRPL55-234ENST00000497758 PLA2G4DQ86XP0 818 aa13.36□□□□□ -0.27
MRPL55-234ENST00000497758 FAM126BQ8IXS8 530 aa13.36□□□□□ -0.27
MRPL55-234ENST00000497758 SLC43A3Q8NBI5 491 aa13.36□□□□□ -0.27
MRPL55-234ENST00000497758 CYP2W1Q8TAV3 490 aa13.36□□□□□ -0.27
MRPL55-234ENST00000497758 LLPHQ9BRT6 129 aaKnown RBP13.36□□□□□ -0.27
MRPL55-234ENST00000497758 PHF20Q9BVI0 1012 aa13.36□□□□□ -0.27
MRPL55-234ENST00000497758 GRIN2DO15399 1336 aa13.36□□□□□ -0.27
MRPL55-234ENST00000497758 CCDC194A0A1B0GVG4 234 aa13.35□□□□□ -0.27
MRPL55-234ENST00000497758 TRIM43BA6NCK2 446 aa13.35□□□□□ -0.27
MRPL55-234ENST00000497758 FAM86B1E9PN63 330 aa13.35□□□□□ -0.27
MRPL55-234ENST00000497758 MEIS1O00470 390 aa13.35□□□□□ -0.27
MRPL55-234ENST00000497758 KIAA0355O15063 1070 aa13.35□□□□□ -0.27
MRPL55-234ENST00000497758 ATP9AO75110 1047 aa13.35□□□□□ -0.27
MRPL55-234ENST00000497758 F2P00734 622 aa13.35□□□□□ -0.27
MRPL55-234ENST00000497758 FAM86B2P0C5J1 330 aa13.35□□□□□ -0.27
MRPL55-234ENST00000497758 HOXD8P13378 290 aaPredicted RBP13.35□□□□□ -0.27
MRPL55-234ENST00000497758 FDPSP14324 419 aaKnown RBP13.35□□□□□ -0.27
MRPL55-234ENST00000497758 MCM2P49736 904 aa13.35□□□□□ -0.27
MRPL55-234ENST00000497758 PSEN2P49810 448 aa13.35□□□□□ -0.27
MRPL55-234ENST00000497758 FOSBP53539 338 aa13.35□□□□□ -0.27
MRPL55-234ENST00000497758 HMGN5P82970 282 aaKnown RBP13.35□□□□□ -0.27
MRPL55-234ENST00000497758 MDM2Q00987 491 aaPredicted RBP13.35□□□□□ -0.27
MRPL55-234ENST00000497758 MFSD10Q14728 455 aa13.35□□□□□ -0.27
MRPL55-234ENST00000497758 NONOQ15233 471 aaKnown RBP eCLIP13.35□□□□□ -0.27
MRPL55-234ENST00000497758 PRR16Q569H4 304 aa13.35□□□□□ -0.27
MRPL55-234ENST00000497758 SH3RF1Q7Z6J0 888 aa13.35□□□□□ -0.27
MRPL55-234ENST00000497758 C7orf31Q8N865 590 aa13.35□□□□□ -0.27
MRPL55-234ENST00000497758 TBCKQ8TEA7 893 aa13.35□□□□□ -0.27
MRPL55-234ENST00000497758 CRYGNQ8WXF5 182 aa13.35□□□□□ -0.27
MRPL55-234ENST00000497758 TRIM43Q96BQ3 446 aaPredicted RBP13.35□□□□□ -0.27
MRPL55-234ENST00000497758 GPR20Q99678 358 aa13.35□□□□□ -0.27
MRPL55-234ENST00000497758 TRPV6Q9H1D0 765 aa13.35□□□□□ -0.27
MRPL55-234ENST00000497758 BCAS3Q9H6U6 928 aa13.35□□□□□ -0.27
MRPL55-234ENST00000497758 AGO4Q9HCK5 861 aaKnown RBP13.35□□□□□ -0.27
MRPL55-234ENST00000497758 JPH1Q9HDC5 661 aaPredicted RBP13.35□□□□□ -0.27
MRPL55-234ENST00000497758 TCEAL9Q9UHQ7 104 aa13.35□□□□□ -0.27
MRPL55-234ENST00000497758 ZNF215Q9UL58 517 aaPredicted RBP13.35□□□□□ -0.27
MRPL55-234ENST00000497758 NOD1Q9Y239 953 aa13.35□□□□□ -0.27
MRPL55-234ENST00000497758 B4GALT4O60513 344 aa13.34□□□□□ -0.27
MRPL55-234ENST00000497758 LGALS2P05162 132 aa13.34□□□□□ -0.27
MRPL55-234ENST00000497758 SUPT20HL2P0C7V6 817 aa13.34□□□□□ -0.27
MRPL55-234ENST00000497758 ARP10275 920 aa13.34□□□□□ -0.27
MRPL55-234ENST00000497758 KRT2P35908 639 aa13.34□□□□□ -0.27
MRPL55-234ENST00000497758 USP11P51784 963 aa13.34□□□□□ -0.27
MRPL55-234ENST00000497758 PTPN11Q06124 597 aaPredicted RBP13.34□□□□□ -0.27
MRPL55-234ENST00000497758 ST3GAL1Q11201 340 aa13.34□□□□□ -0.27
MRPL55-234ENST00000497758 NPY5RQ15761 445 aa13.34□□□□□ -0.27
MRPL55-234ENST00000497758 KIAA0753Q2KHM9 967 aa13.34□□□□□ -0.27
MRPL55-234ENST00000497758 UTP14CQ5TAP6 766 aaKnown RBP13.34□□□□□ -0.27
MRPL55-234ENST00000497758 FAM184AQ8NB25 1140 aa13.34□□□□□ -0.27
MRPL55-234ENST00000497758 PPP1R13LQ8WUF5 828 aa13.34□□□□□ -0.27
MRPL55-234ENST00000497758 KAT2BQ92831 832 aa13.34□□□□□ -0.27
MRPL55-234ENST00000497758 GJB4Q9NTQ9 266 aa13.34□□□□□ -0.27
MRPL55-234ENST00000497758 TRMT13Q9NUP7 481 aaKnown RBP13.34□□□□□ -0.27
MRPL55-234ENST00000497758 SLC9A2Q9UBY0 812 aa13.34□□□□□ -0.27
MRPL55-234ENST00000497758 TBX21Q9UL17 535 aa13.34□□□□□ -0.27
MRPL55-234ENST00000497758 COLQQ9Y215 455 aaPredicted RBP13.34□□□□□ -0.27
MRPL55-234ENST00000497758 NFASCO94856 1347 aa13.34□□□□□ -0.27
MRPL55-234ENST00000497758 TRIOBPQ9H2D6 2365 aa13.34□□□□□ -0.27
MRPL55-234ENST00000497758 SCN10AQ9Y5Y9 1956 aa13.33□□□□□ -0.28
MRPL55-234ENST00000497758 H3BRB1 525 aa13.33□□□□□ -0.28
MRPL55-234ENST00000497758 M0R2N6 131 aa13.33□□□□□ -0.28
MRPL55-234ENST00000497758 IPO5O00410 1097 aaKnown RBP13.33□□□□□ -0.28
MRPL55-234ENST00000497758 CD4P01730 458 aa13.33□□□□□ -0.28
MRPL55-234ENST00000497758 CIITAP33076 1130 aa13.33□□□□□ -0.28
MRPL55-234ENST00000497758 TCF7P36402 384 aaPredicted RBP13.33□□□□□ -0.28
MRPL55-234ENST00000497758 SAFBQ15424 915 aaKnown RBP eCLIP13.33□□□□□ -0.28
MRPL55-234ENST00000497758 SEPT1Q8WYJ6 367 aa13.33□□□□□ -0.28
MRPL55-234ENST00000497758 GLG1Q92896 1179 aa13.33□□□□□ -0.28
MRPL55-234ENST00000497758 BADQ92934 168 aa13.33□□□□□ -0.28
MRPL55-234ENST00000497758 GDF15Q99988 308 aa13.33□□□□□ -0.28
MRPL55-234ENST00000497758 ZNF577Q9BSK1 485 aa13.33□□□□□ -0.28
MRPL55-234ENST00000497758 UBE2OQ9C0C9 1292 aaKnown RBP13.33□□□□□ -0.28
MRPL55-234ENST00000497758 HIPK3Q9H422 1215 aa13.33□□□□□ -0.28
MRPL55-234ENST00000497758 TUT1Q9H6E5 874 aaKnown RBP13.33□□□□□ -0.28
MRPL55-234ENST00000497758 MYH7BA7E2Y1 1941 aa13.33□□□□□ -0.28
MRPL55-234ENST00000497758 IGLV3-22A0A075B6J6 115 aa13.32□□□□□ -0.28
MRPL55-234ENST00000497758 DDX39AO00148 427 aaKnown RBP13.32□□□□□ -0.28
MRPL55-234ENST00000497758 TIMP1P01033 207 aa13.32□□□□□ -0.28
MRPL55-234ENST00000497758 ITGB3BPQ13352 177 aaPredicted RBP13.32□□□□□ -0.28
MRPL55-234ENST00000497758 PTGISQ16647 500 aa13.32□□□□□ -0.28
MRPL55-234ENST00000497758 INF2Q27J81 1249 aa13.32□□□□□ -0.28
MRPL55-234ENST00000497758 KRT40Q6A162 431 aa13.32□□□□□ -0.28
MRPL55-234ENST00000497758 PIK3AP1Q6ZUJ8 805 aa13.32□□□□□ -0.28
MRPL55-234ENST00000497758 SESTD1Q86VW0 696 aa13.32□□□□□ -0.28
MRPL55-234ENST00000497758 TRIM50Q86XT4 487 aa13.32□□□□□ -0.28
MRPL55-234ENST00000497758 OXER1Q8TDS5 423 aa13.32□□□□□ -0.28
MRPL55-234ENST00000497758 TMX3Q96JJ7 454 aa13.32□□□□□ -0.28
MRPL55-234ENST00000497758 C8orf76Q96K31 380 aa13.32□□□□□ -0.28
MRPL55-234ENST00000497758 UIMC1Q96RL1 719 aa13.32□□□□□ -0.28
MRPL55-234ENST00000497758 C16orf70Q9BSU1 422 aa13.32□□□□□ -0.28
MRPL55-234ENST00000497758 PPP1R12CQ9BZL4 782 aa13.32□□□□□ -0.28
MRPL55-234ENST00000497758 AZI2Q9H6S1 392 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms