RNA–Protein interactions for RNA: ENST00000497638.2

VPS45-210, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,135 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-210ENST00000497638 PLA2G5P39877 138 aa9.46□□□□□ -0.9
VPS45-210ENST00000497638 USP11P51784 963 aa9.46□□□□□ -0.9
VPS45-210ENST00000497638 NFKBIBQ15653 356 aa9.46□□□□□ -0.9
VPS45-210ENST00000497638 EXOSC6Q5RKV6 272 aaKnown RBP9.46□□□□□ -0.9
VPS45-210ENST00000497638 TREML2Q5T2D2 321 aa9.46□□□□□ -0.9
VPS45-210ENST00000497638 PEAR1Q5VY43 1037 aaPredicted RBP9.46□□□□□ -0.9
VPS45-210ENST00000497638 DTX1Q86Y01 620 aa9.46□□□□□ -0.9
VPS45-210ENST00000497638 KRTAP1-3Q8IUG1 177 aa9.46□□□□□ -0.9
VPS45-210ENST00000497638 SMG8Q8ND04 991 aaKnown RBP9.46□□□□□ -0.9
VPS45-210ENST00000497638 KRTAP4-12Q9BQ66 201 aa9.46□□□□□ -0.9
VPS45-210ENST00000497638 IDI2Q9BXS1 227 aa9.46□□□□□ -0.9
VPS45-210ENST00000497638 USP40Q9NVE5 1235 aa9.46□□□□□ -0.9
VPS45-210ENST00000497638 PRKAG2Q9UGJ0 569 aa9.46□□□□□ -0.9
VPS45-210ENST00000497638 PLXNB2O15031 1838 aa9.46□□□□□ -0.9
VPS45-210ENST00000497638 TMEM265A0A087WTH1 108 aa9.45□□□□□ -0.9
VPS45-210ENST00000497638 F6X3S4 739 aa9.45□□□□□ -0.9
VPS45-210ENST00000497638 ADAMTS4O75173 837 aa9.45□□□□□ -0.9
VPS45-210ENST00000497638 ALDH1L1O75891 902 aa9.45□□□□□ -0.9
VPS45-210ENST00000497638 POLR3DP05423 398 aaPredicted RBP9.45□□□□□ -0.9
VPS45-210ENST00000497638 FOSL2P15408 326 aa9.45□□□□□ -0.9
VPS45-210ENST00000497638 ZKSCAN1P17029 563 aaPredicted RBP9.45□□□□□ -0.9
VPS45-210ENST00000497638 TAL1P17542 331 aaPredicted RBP9.45□□□□□ -0.9
VPS45-210ENST00000497638 CYP2B6P20813 491 aa9.45□□□□□ -0.9
VPS45-210ENST00000497638 RGS3P49796 1198 aa9.45□□□□□ -0.9
VPS45-210ENST00000497638 SMAD3P84022 425 aaKnown RBP9.45□□□□□ -0.9
VPS45-210ENST00000497638 ZNF211Q13398 564 aaPredicted RBP9.45□□□□□ -0.9
VPS45-210ENST00000497638 PUM3Q15397 648 aaKnown RBP9.45□□□□□ -0.9
VPS45-210ENST00000497638 ZSCAN29Q8IWY8 852 aaPredicted RBP9.45□□□□□ -0.9
VPS45-210ENST00000497638 MYLIPQ8WY64 445 aa9.45□□□□□ -0.9
VPS45-210ENST00000497638 SUGCTQ9HAC7 445 aa9.45□□□□□ -0.9
VPS45-210ENST00000497638 MORF4L1Q9UBU8 362 aa9.45□□□□□ -0.9
VPS45-210ENST00000497638 RFX7Q2KHR2 1363 aa9.45□□□□□ -0.9
VPS45-210ENST00000497638 LTBP2Q14767 1821 aa9.45□□□□□ -0.9
VPS45-210ENST00000497638 METTL12A8MUP2 240 aa9.44□□□□□ -0.9
VPS45-210ENST00000497638 LDHBP07195 334 aaKnown RBP9.44□□□□□ -0.9
VPS45-210ENST00000497638 DRD2P14416 443 aa9.44□□□□□ -0.9
VPS45-210ENST00000497638 PDE3AQ14432 1141 aa9.44□□□□□ -0.9
VPS45-210ENST00000497638 LRRC24Q50LG9 513 aa9.44□□□□□ -0.9
VPS45-210ENST00000497638 ZFPM1Q8IX07 1006 aa9.44□□□□□ -0.9
VPS45-210ENST00000497638 GJD3Q8N144 294 aa9.44□□□□□ -0.9
VPS45-210ENST00000497638 FAM122AQ96E09 287 aa9.44□□□□□ -0.9
VPS45-210ENST00000497638 ASCC2Q9H1I8 757 aaPredicted RBP9.44□□□□□ -0.9
VPS45-210ENST00000497638 IL16Q14005 1332 aa9.44□□□□□ -0.9
VPS45-210ENST00000497638 PIEZO1Q92508 2521 aa9.43□□□□□ -0.9
VPS45-210ENST00000497638 FRMPD3Q5JV73 1810 aa9.43□□□□□ -0.9
VPS45-210ENST00000497638 SALL1Q9NSC2 1324 aa9.43□□□□□ -0.9
VPS45-210ENST00000497638 FAM95CA0A1B0GW59 222 aa9.43□□□□□ -0.9
VPS45-210ENST00000497638 EIF4EBP3O60516 100 aaPredicted RBP9.43□□□□□ -0.9
VPS45-210ENST00000497638 TIAF1O95411 115 aa9.43□□□□□ -0.9
VPS45-210ENST00000497638 DLGAP3O95886 979 aa9.43□□□□□ -0.9
VPS45-210ENST00000497638 SLC5A1P13866 664 aa9.43□□□□□ -0.9
VPS45-210ENST00000497638 FGFR2P21802 821 aa9.43□□□□□ -0.9
VPS45-210ENST00000497638 PRDX5P30044 214 aa9.43□□□□□ -0.9
VPS45-210ENST00000497638 MAPK4P31152 587 aa9.43□□□□□ -0.9
VPS45-210ENST00000497638 CACNB2Q08289 660 aaPredicted RBP9.43□□□□□ -0.9
VPS45-210ENST00000497638 CCDC27Q2M243 656 aa9.43□□□□□ -0.9
VPS45-210ENST00000497638 RABL6Q3YEC7 729 aaPredicted RBP9.43□□□□□ -0.9
VPS45-210ENST00000497638 LCE3BQ5TA77 95 aa9.43□□□□□ -0.9
VPS45-210ENST00000497638 PHLDB3Q6NSJ2 640 aa9.43□□□□□ -0.9
VPS45-210ENST00000497638 PAOXQ6QHF9 649 aa9.43□□□□□ -0.9
VPS45-210ENST00000497638 KAZALD1Q96I82 304 aa9.43□□□□□ -0.9
VPS45-210ENST00000497638 SUCLG2Q96I99 432 aa9.43□□□□□ -0.9
VPS45-210ENST00000497638 OSBPL1AQ9BXW6 950 aa9.43□□□□□ -0.9
VPS45-210ENST00000497638 SRCIN1Q9C0H9 1055 aa9.43□□□□□ -0.9
VPS45-210ENST00000497638 TTYH1Q9H313 450 aaPredicted RBP9.43□□□□□ -0.9
VPS45-210ENST00000497638 GAKO14976 1311 aa9.42□□□□□ -0.9
VPS45-210ENST00000497638 CCND3P30281 292 aaPredicted RBP9.42□□□□□ -0.9
VPS45-210ENST00000497638 RGS2P41220 211 aa9.42□□□□□ -0.9
VPS45-210ENST00000497638 HMGCS2P54868 508 aa9.42□□□□□ -0.9
VPS45-210ENST00000497638 IRX3P78415 501 aaPredicted RBP9.42□□□□□ -0.9
VPS45-210ENST00000497638 SPP2Q13103 211 aa9.42□□□□□ -0.9
VPS45-210ENST00000497638 SHHQ15465 462 aa9.42□□□□□ -0.9
VPS45-210ENST00000497638 CCDC84Q86UT8 332 aaPredicted RBP9.42□□□□□ -0.9
VPS45-210ENST00000497638 FBLIM1Q8WUP2 373 aa9.42□□□□□ -0.9
VPS45-210ENST00000497638 APBA2Q99767 749 aa9.42□□□□□ -0.9
VPS45-210ENST00000497638 SENP6Q9GZR1 1112 aaPredicted RBP9.42□□□□□ -0.9
VPS45-210ENST00000497638 OSBPL5Q9H0X9 879 aaPredicted RBP9.42□□□□□ -0.9
VPS45-210ENST00000497638 GOLGA2P5Q9HBQ8 144 aa9.42□□□□□ -0.9
VPS45-210ENST00000497638 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.42□□□□□ -0.9
VPS45-210ENST00000497638 MYH2Q9UKX2 1941 aa9.42□□□□□ -0.9
VPS45-210ENST00000497638 BDP1A6H8Y1 2624 aa9.41□□□□□ -0.9
VPS45-210ENST00000497638 UTYO14607 1347 aa9.41□□□□□ -0.9
VPS45-210ENST00000497638 A0A096LPE4 126 aa9.41□□□□□ -0.9
VPS45-210ENST00000497638 A0A1W2PPZ6 126 aa9.41□□□□□ -0.9
VPS45-210ENST00000497638 DDTLA6NHG4 134 aaPredicted RBP9.41□□□□□ -0.9
VPS45-210ENST00000497638 MSCO60682 206 aa9.41□□□□□ -0.9
VPS45-210ENST00000497638 VAMP4O75379 141 aa9.41□□□□□ -0.9
VPS45-210ENST00000497638 F13BP05160 661 aa9.41□□□□□ -0.9
VPS45-210ENST00000497638 TXKP42681 527 aa9.41□□□□□ -0.9
VPS45-210ENST00000497638 RTP1P59025 263 aa9.41□□□□□ -0.9
VPS45-210ENST00000497638 ZGPATQ8N5A5 531 aaKnown RBP9.41□□□□□ -0.9
VPS45-210ENST00000497638 GPRC5AQ8NFJ5 357 aa9.41□□□□□ -0.9
VPS45-210ENST00000497638 LPIN2Q92539 896 aa9.41□□□□□ -0.9
VPS45-210ENST00000497638 USP6NLQ92738 828 aa9.41□□□□□ -0.9
VPS45-210ENST00000497638 YIPF2Q9BWQ6 316 aa9.41□□□□□ -0.9
VPS45-210ENST00000497638 BICC1Q9H694 974 aaKnown RBP9.41□□□□□ -0.9
VPS45-210ENST00000497638 AS3MTQ9HBK9 375 aa9.41□□□□□ -0.9
VPS45-210ENST00000497638 GNL3LQ9NVN8 582 aaKnown RBP9.41□□□□□ -0.9
VPS45-210ENST00000497638 RAPGEFL1Q9UHV5 662 aa9.41□□□□□ -0.9
VPS45-210ENST00000497638 ATAD5Q96QE3 1844 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms