RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 LAMC2Q13753 1193 aa22.29■■□□□ 1.16
SCAMP3-209ENST00000497470 CCDC144BQ3MJ40 725 aa22.29■■□□□ 1.16
SCAMP3-209ENST00000497470 SMAP1Q8IYB5 467 aaPredicted RBP22.29■■□□□ 1.16
SCAMP3-209ENST00000497470 IGSF22Q8N9C0 903 aa22.29■■□□□ 1.16
SCAMP3-209ENST00000497470 LEO1Q8WVC0 666 aaPredicted RBP22.29■■□□□ 1.16
SCAMP3-209ENST00000497470 TEKT3Q9BXF9 490 aa22.29■■□□□ 1.16
SCAMP3-209ENST00000497470 TFIP11Q9UBB9 837 aaKnown RBP22.29■■□□□ 1.16
SCAMP3-209ENST00000497470 MARCH6O60337 910 aa22.28■■□□□ 1.16
SCAMP3-209ENST00000497470 GAS7O60861 476 aa22.28■■□□□ 1.16
SCAMP3-209ENST00000497470 GH1P01241 217 aa22.28■■□□□ 1.16
SCAMP3-209ENST00000497470 MUTP22033 750 aa22.28■■□□□ 1.16
SCAMP3-209ENST00000497470 UBA1P22314 1058 aaKnown RBP22.28■■□□□ 1.16
SCAMP3-209ENST00000497470 TNFAIP2Q03169 654 aa22.28■■□□□ 1.16
SCAMP3-209ENST00000497470 NBR1Q14596 966 aa22.28■■□□□ 1.16
SCAMP3-209ENST00000497470 CELF3Q5SZQ8 465 aaKnown RBP22.28■■□□□ 1.16
SCAMP3-209ENST00000497470 LRCH2Q5VUJ6 765 aa22.28■■□□□ 1.16
SCAMP3-209ENST00000497470 KRI1Q8N9T8 703 aaKnown RBP22.28■■□□□ 1.16
SCAMP3-209ENST00000497470 SPATA32Q96LK8 384 aa22.28■■□□□ 1.16
SCAMP3-209ENST00000497470 TTC12Q9H892 705 aaPredicted RBP22.28■■□□□ 1.16
SCAMP3-209ENST00000497470 TCEAL9Q9UHQ7 104 aa22.28■■□□□ 1.16
SCAMP3-209ENST00000497470 GNEQ9Y223 722 aaKnown RBP22.28■■□□□ 1.16
SCAMP3-209ENST00000497470 ATP9AO75110 1047 aa22.27■■□□□ 1.16
SCAMP3-209ENST00000497470 ECM2O94769 699 aaPredicted RBP22.27■■□□□ 1.16
SCAMP3-209ENST00000497470 ATG7O95352 703 aa22.27■■□□□ 1.16
SCAMP3-209ENST00000497470 PRKAR2AP13861 404 aaKnown RBP22.27■■□□□ 1.16
SCAMP3-209ENST00000497470 SPIRE1Q08AE8 756 aa22.27■■□□□ 1.16
SCAMP3-209ENST00000497470 ITGB3BPQ13352 177 aaPredicted RBP22.27■■□□□ 1.16
SCAMP3-209ENST00000497470 ARMC5Q96C12 935 aa22.27■■□□□ 1.16
SCAMP3-209ENST00000497470 HMX1Q9NP08 348 aaPredicted RBP22.27■■□□□ 1.16
SCAMP3-209ENST00000497470 FBXO2Q9UK22 296 aaPredicted RBP22.27■■□□□ 1.16
SCAMP3-209ENST00000497470 VAV3Q9UKW4 847 aa22.27■■□□□ 1.16
SCAMP3-209ENST00000497470 ZHX1Q9UKY1 873 aaPredicted RBP22.27■■□□□ 1.16
SCAMP3-209ENST00000497470 CUTAO60888 179 aa22.26■■□□□ 1.15
SCAMP3-209ENST00000497470 FARP2O94887 1054 aaPredicted RBP22.26■■□□□ 1.15
SCAMP3-209ENST00000497470 INHAP05111 366 aa22.26■■□□□ 1.15
SCAMP3-209ENST00000497470 HOXD8P13378 290 aaPredicted RBP22.26■■□□□ 1.15
SCAMP3-209ENST00000497470 ELNP15502 786 aa22.26■■□□□ 1.15
SCAMP3-209ENST00000497470 JAK3P52333 1124 aa22.26■■□□□ 1.15
SCAMP3-209ENST00000497470 SP2Q02086 613 aa22.26■■□□□ 1.15
SCAMP3-209ENST00000497470 ADALQ6DHV7 355 aa22.26■■□□□ 1.15
SCAMP3-209ENST00000497470 EEPD1Q7L9B9 569 aa22.26■■□□□ 1.15
SCAMP3-209ENST00000497470 NEK9Q8TD19 979 aa22.26■■□□□ 1.15
SCAMP3-209ENST00000497470 JPH1Q9HDC5 661 aaPredicted RBP22.26■■□□□ 1.15
SCAMP3-209ENST00000497470 PDGFCQ9NRA1 345 aa22.26■■□□□ 1.15
SCAMP3-209ENST00000497470 SLC9A2Q9UBY0 812 aa22.26■■□□□ 1.15
SCAMP3-209ENST00000497470 ARIH2O95376 493 aa22.25■■□□□ 1.15
SCAMP3-209ENST00000497470 SMPD1P17405 629 aa22.25■■□□□ 1.15
SCAMP3-209ENST00000497470 ADCYAP1R1P41586 468 aa22.25■■□□□ 1.15
SCAMP3-209ENST00000497470 TXKP42681 527 aa22.25■■□□□ 1.15
SCAMP3-209ENST00000497470 SLC9C1Q4G0N8 1177 aa22.25■■□□□ 1.15
SCAMP3-209ENST00000497470 DHX37Q8IY37 1157 aaKnown RBP22.25■■□□□ 1.15
SCAMP3-209ENST00000497470 TRPV1Q8NER1 839 aa22.25■■□□□ 1.15
SCAMP3-209ENST00000497470 FTOQ9C0B1 505 aaKnown RBP eCLIP22.25■■□□□ 1.15
SCAMP3-209ENST00000497470 UPF3AQ9H1J1 476 aaKnown RBP22.25■■□□□ 1.15
SCAMP3-209ENST00000497470 A0A1W2PQ27 194 aa22.24■■□□□ 1.15
SCAMP3-209ENST00000497470 A0A1W2PQ64 194 aa22.24■■□□□ 1.15
SCAMP3-209ENST00000497470 A0A1W2PQD8 194 aa22.24■■□□□ 1.15
SCAMP3-209ENST00000497470 PPFIA4O75335 1185 aa22.24■■□□□ 1.15
SCAMP3-209ENST00000497470 GGPS1O95749 300 aa22.24■■□□□ 1.15
SCAMP3-209ENST00000497470 ARHGAP1Q07960 439 aa22.24■■□□□ 1.15
SCAMP3-209ENST00000497470 PPTC7Q8NI37 304 aa22.24■■□□□ 1.15
SCAMP3-209ENST00000497470 MLXIPQ9HAP2 919 aa22.24■■□□□ 1.15
SCAMP3-209ENST00000497470 DDX49Q9Y6V7 483 aaKnown RBP22.24■■□□□ 1.15
SCAMP3-209ENST00000497470 TCHHQ07283 1943 aa22.23■■□□□ 1.15
SCAMP3-209ENST00000497470 A6NJR5 290 aa22.23■■□□□ 1.15
SCAMP3-209ENST00000497470 WDR64B1ANS9 1081 aa22.23■■□□□ 1.15
SCAMP3-209ENST00000497470 KPNA6O60684 536 aa22.23■■□□□ 1.15
SCAMP3-209ENST00000497470 DKC1O60832 514 aaKnown RBP eCLIP22.23■■□□□ 1.15
SCAMP3-209ENST00000497470 NCLP19338 710 aaKnown RBP22.23■■□□□ 1.15
SCAMP3-209ENST00000497470 GJA9P57773 515 aa22.23■■□□□ 1.15
SCAMP3-209ENST00000497470 EPHA7Q15375 998 aa22.23■■□□□ 1.15
SCAMP3-209ENST00000497470 LY6KQ17RY6 165 aa22.23■■□□□ 1.15
SCAMP3-209ENST00000497470 BRDTQ58F21 947 aaPredicted RBP22.23■■□□□ 1.15
SCAMP3-209ENST00000497470 PRAMEF19Q5SWL8 479 aa22.23■■□□□ 1.15
SCAMP3-209ENST00000497470 AXDND1Q5T1B0 1012 aaPredicted RBP22.23■■□□□ 1.15
SCAMP3-209ENST00000497470 ERMNQ8TAM6 284 aa22.23■■□□□ 1.15
SCAMP3-209ENST00000497470 SEPT1Q8WYJ6 367 aa22.23■■□□□ 1.15
SCAMP3-209ENST00000497470 ZFP91Q96JP5 570 aaPredicted RBP22.23■■□□□ 1.15
SCAMP3-209ENST00000497470 CCSER1Q9C0I3 900 aa22.23■■□□□ 1.15
SCAMP3-209ENST00000497470 DDX20Q9UHI6 824 aaKnown RBP22.23■■□□□ 1.15
SCAMP3-209ENST00000497470 PCDHA10Q9Y5I2 948 aa22.23■■□□□ 1.15
SCAMP3-209ENST00000497470 PCNTO95613 3336 aa22.22■■□□□ 1.15
SCAMP3-209ENST00000497470 IGKV6D-21A0A0A0MT36 114 aa22.22■■□□□ 1.15
SCAMP3-209ENST00000497470 FAM237AA0A1B0GTK4 181 aa22.22■■□□□ 1.15
SCAMP3-209ENST00000497470 GOLGA6L22H0YM25 854 aa22.22■■□□□ 1.15
SCAMP3-209ENST00000497470 RARBP10826 455 aa22.22■■□□□ 1.15
SCAMP3-209ENST00000497470 CST5P28325 142 aaPredicted RBP22.22■■□□□ 1.15
SCAMP3-209ENST00000497470 CEBPZQ03701 1054 aaKnown RBP22.22■■□□□ 1.15
SCAMP3-209ENST00000497470 IL17AQ16552 155 aa22.22■■□□□ 1.15
SCAMP3-209ENST00000497470 HAUS3Q68CZ6 603 aa22.22■■□□□ 1.15
SCAMP3-209ENST00000497470 CYFIP1Q7L576 1253 aa22.22■■□□□ 1.15
SCAMP3-209ENST00000497470 SPC25Q9HBM1 224 aa22.22■■□□□ 1.15
SCAMP3-209ENST00000497470 PAK6Q9NQU5 681 aaPredicted RBP22.22■■□□□ 1.15
SCAMP3-209ENST00000497470 PCDHA7Q9UN72 937 aa22.22■■□□□ 1.15
SCAMP3-209ENST00000497470 CMA1P23946 247 aa22.21■■□□□ 1.15
SCAMP3-209ENST00000497470 ME1P48163 572 aa22.21■■□□□ 1.15
SCAMP3-209ENST00000497470 SLC26A2P50443 739 aa22.21■■□□□ 1.15
SCAMP3-209ENST00000497470 FOXD4L6Q3SYB3 417 aaPredicted RBP22.21■■□□□ 1.15
SCAMP3-209ENST00000497470 HYIQ5T013 277 aa22.21■■□□□ 1.15
SCAMP3-209ENST00000497470 ABHD15Q6UXT9 468 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms