RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 CXCL17Q6UXB2 119 aa13.1□□□□□ -0.31
HLA-B-254ENST00000497377 GIMAP8Q8ND71 665 aaPredicted RBP13.1□□□□□ -0.31
HLA-B-254ENST00000497377 PPTC7Q8NI37 304 aa13.1□□□□□ -0.31
HLA-B-254ENST00000497377 COPS5Q92905 334 aa13.1□□□□□ -0.31
HLA-B-254ENST00000497377 VTI1AQ96AJ9 217 aa13.1□□□□□ -0.31
HLA-B-254ENST00000497377 ZSCAN31Q96LW9 406 aaPredicted RBP13.1□□□□□ -0.31
HLA-B-254ENST00000497377 TBC1D32Q96NH3 1257 aa13.1□□□□□ -0.31
HLA-B-254ENST00000497377 SENP7Q9BQF6 1050 aa13.1□□□□□ -0.31
HLA-B-254ENST00000497377 ANO3Q9BYT9 981 aa13.1□□□□□ -0.31
HLA-B-254ENST00000497377 VPS54Q9P1Q0 977 aa13.1□□□□□ -0.31
HLA-B-254ENST00000497377 H0YGN5 161 aa13.09□□□□□ -0.31
HLA-B-254ENST00000497377 ARVCFO00192 962 aa13.09□□□□□ -0.31
HLA-B-254ENST00000497377 CEP290O15078 2479 aa13.09□□□□□ -0.31
HLA-B-254ENST00000497377 PTGS1P23219 599 aa13.09□□□□□ -0.31
HLA-B-254ENST00000497377 NLRP5P59047 1200 aa13.09□□□□□ -0.31
HLA-B-254ENST00000497377 PURAQ00577 322 aaKnown RBP13.09□□□□□ -0.31
HLA-B-254ENST00000497377 DGKDQ16760 1214 aa13.09□□□□□ -0.31
HLA-B-254ENST00000497377 TRIM60Q495X7 471 aa13.09□□□□□ -0.31
HLA-B-254ENST00000497377 ARSIQ5FYB1 569 aa13.09□□□□□ -0.31
HLA-B-254ENST00000497377 CELF3Q5SZQ8 465 aaKnown RBP13.09□□□□□ -0.31
HLA-B-254ENST00000497377 ANKRD33Q7Z3H0 272 aa13.09□□□□□ -0.31
HLA-B-254ENST00000497377 AFG1LQ8WV93 481 aa13.09□□□□□ -0.31
HLA-B-254ENST00000497377 TOX2Q96NM4 488 aa13.09□□□□□ -0.31
HLA-B-254ENST00000497377 MTG1Q9BT17 334 aaPredicted RBP13.09□□□□□ -0.31
HLA-B-254ENST00000497377 SH2B1Q9NRF2 756 aaPredicted RBP13.09□□□□□ -0.31
HLA-B-254ENST00000497377 RTEL1Q9NZ71 1219 aa13.09□□□□□ -0.31
HLA-B-254ENST00000497377 ORC3Q9UBD5 711 aaPredicted RBP13.09□□□□□ -0.31
HLA-B-254ENST00000497377 ATP11BQ9Y2G3 1177 aa13.09□□□□□ -0.31
HLA-B-254ENST00000497377 UBIAD1Q9Y5Z9 338 aa13.09□□□□□ -0.31
HLA-B-254ENST00000497377 C2orf72A6NCS6 295 aa13.08□□□□□ -0.32
HLA-B-254ENST00000497377 DCDC2CA8MYV0 355 aa13.08□□□□□ -0.32
HLA-B-254ENST00000497377 PPFIA3O75145 1194 aa13.08□□□□□ -0.32
HLA-B-254ENST00000497377 LARGE1O95461 756 aa13.08□□□□□ -0.32
HLA-B-254ENST00000497377 CTDNEP1O95476 244 aa13.08□□□□□ -0.32
HLA-B-254ENST00000497377 GGPS1O95749 300 aa13.08□□□□□ -0.32
HLA-B-254ENST00000497377 MMP3P08254 477 aa13.08□□□□□ -0.32
HLA-B-254ENST00000497377 MYL3P08590 195 aa13.08□□□□□ -0.32
HLA-B-254ENST00000497377 UBA1P22314 1058 aaKnown RBP13.08□□□□□ -0.32
HLA-B-254ENST00000497377 CDK7P50613 346 aa13.08□□□□□ -0.32
HLA-B-254ENST00000497377 ARHGAP4P98171 946 aa13.08□□□□□ -0.32
HLA-B-254ENST00000497377 MTMR1Q13613 665 aa13.08□□□□□ -0.32
HLA-B-254ENST00000497377 ITGA7Q13683 1181 aa13.08□□□□□ -0.32
HLA-B-254ENST00000497377 MYSM1Q5VVJ2 828 aa13.08□□□□□ -0.32
HLA-B-254ENST00000497377 METTL7BQ6UX53 244 aa13.08□□□□□ -0.32
HLA-B-254ENST00000497377 NIPA1Q7RTP0 329 aa13.08□□□□□ -0.32
HLA-B-254ENST00000497377 NECAB1Q8N987 351 aa13.08□□□□□ -0.32
HLA-B-254ENST00000497377 SLC43A3Q8NBI5 491 aa13.08□□□□□ -0.32
HLA-B-254ENST00000497377 DAGLBQ8NCG7 672 aa13.08□□□□□ -0.32
HLA-B-254ENST00000497377 MXRA8Q9BRK3 442 aa13.08□□□□□ -0.32
HLA-B-254ENST00000497377 BACH2Q9BYV9 841 aa13.08□□□□□ -0.32
HLA-B-254ENST00000497377 MLXIPQ9HAP2 919 aa13.08□□□□□ -0.32
HLA-B-254ENST00000497377 JADE2Q9NQC1 790 aa13.08□□□□□ -0.32
HLA-B-254ENST00000497377 TMEM260Q9NX78 707 aa13.08□□□□□ -0.32
HLA-B-254ENST00000497377 PRKAG2Q9UGJ0 569 aa13.08□□□□□ -0.32
HLA-B-254ENST00000497377 PCDHA4Q9UN74 947 aa13.08□□□□□ -0.32
HLA-B-254ENST00000497377 SCN10AQ9Y5Y9 1956 aa13.08□□□□□ -0.32
HLA-B-254ENST00000497377 PPFIA4O75335 1185 aa13.07□□□□□ -0.32
HLA-B-254ENST00000497377 CYP3A4P08684 503 aa13.07□□□□□ -0.32
HLA-B-254ENST00000497377 HOXD8P13378 290 aaPredicted RBP13.07□□□□□ -0.32
HLA-B-254ENST00000497377 ITGB5P18084 799 aa13.07□□□□□ -0.32
HLA-B-254ENST00000497377 SP2Q02086 613 aa13.07□□□□□ -0.32
HLA-B-254ENST00000497377 TLE2Q04725 743 aa13.07□□□□□ -0.32
HLA-B-254ENST00000497377 SEMA3FQ13275 785 aa13.07□□□□□ -0.32
HLA-B-254ENST00000497377 CEP55Q53EZ4 464 aa13.07□□□□□ -0.32
HLA-B-254ENST00000497377 JAKMIP3Q5VZ66 844 aa13.07□□□□□ -0.32
HLA-B-254ENST00000497377 NSUN7Q8NE18 718 aaKnown RBP13.07□□□□□ -0.32
HLA-B-254ENST00000497377 CRYGNQ8WXF5 182 aa13.07□□□□□ -0.32
HLA-B-254ENST00000497377 SPATA33Q96N06 139 aa13.07□□□□□ -0.32
HLA-B-254ENST00000497377 LLPHQ9BRT6 129 aaKnown RBP13.07□□□□□ -0.32
HLA-B-254ENST00000497377 KATNAL1Q9BW62 490 aa13.07□□□□□ -0.32
HLA-B-254ENST00000497377 NOP56O00567 594 aaKnown RBP13.06□□□□□ -0.32
HLA-B-254ENST00000497377 TLR3O15455 904 aaKnown RBP13.06□□□□□ -0.32
HLA-B-254ENST00000497377 PQBP1O60828 265 aaKnown RBP13.06□□□□□ -0.32
HLA-B-254ENST00000497377 CLTBP09497 229 aa13.06□□□□□ -0.32
HLA-B-254ENST00000497377 ZNF76P36508 570 aa13.06□□□□□ -0.32
HLA-B-254ENST00000497377 MCM2P49736 904 aa13.06□□□□□ -0.32
HLA-B-254ENST00000497377 PTPN11Q06124 597 aaPredicted RBP13.06□□□□□ -0.32
HLA-B-254ENST00000497377 NFRKBQ6P4R8 1299 aa13.06□□□□□ -0.32
HLA-B-254ENST00000497377 BLIDQ8IZY5 108 aa13.06□□□□□ -0.32
HLA-B-254ENST00000497377 TMC2Q8TDI7 906 aa13.06□□□□□ -0.32
HLA-B-254ENST00000497377 PGBD1Q96JS3 809 aa13.06□□□□□ -0.32
HLA-B-254ENST00000497377 ALG1Q9BT22 464 aa13.06□□□□□ -0.32
HLA-B-254ENST00000497377 PHF20Q9BVI0 1012 aa13.06□□□□□ -0.32
HLA-B-254ENST00000497377 MEIS1O00470 390 aa13.05□□□□□ -0.32
HLA-B-254ENST00000497377 KCNA2P16389 499 aa13.05□□□□□ -0.32
HLA-B-254ENST00000497377 USP11P51784 963 aa13.05□□□□□ -0.32
HLA-B-254ENST00000497377 SETQ01105 290 aaPredicted RBP13.05□□□□□ -0.32
HLA-B-254ENST00000497377 HSDL1Q3SXM5 330 aa13.05□□□□□ -0.32
HLA-B-254ENST00000497377 CYFIP1Q7L576 1253 aa13.05□□□□□ -0.32
HLA-B-254ENST00000497377 FAM126BQ8IXS8 530 aa13.05□□□□□ -0.32
HLA-B-254ENST00000497377 AIFM3Q96NN9 605 aa13.05□□□□□ -0.32
HLA-B-254ENST00000497377 LBHD1Q9BQE6 289 aaPredicted RBP13.05□□□□□ -0.32
HLA-B-254ENST00000497377 PDLIM7Q9NR12 457 aa13.05□□□□□ -0.32
HLA-B-254ENST00000497377 KCNH7Q9NS40 1196 aa13.05□□□□□ -0.32
HLA-B-254ENST00000497377 ZMYND8Q9ULU4 1186 aaPredicted RBP13.05□□□□□ -0.32
HLA-B-254ENST00000497377 GRIN2DO15399 1336 aa13.05□□□□□ -0.32
HLA-B-254ENST00000497377 M0R2N6 131 aa13.04□□□□□ -0.32
HLA-B-254ENST00000497377 KIAA0355O15063 1070 aa13.04□□□□□ -0.32
HLA-B-254ENST00000497377 F2P00734 622 aa13.04□□□□□ -0.32
HLA-B-254ENST00000497377 SUPT20HL2P0C7V6 817 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms