RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 ANAPC15P60006 121 aa5.69□□□□□ -1.5
SMC4-225ENST00000497203 TARBP2Q15633 366 aaKnown RBP5.69□□□□□ -1.5
SMC4-225ENST00000497203 ZNF385BQ569K4 471 aa5.69□□□□□ -1.5
SMC4-225ENST00000497203 CNKSR3Q6P9H4 555 aa5.69□□□□□ -1.5
SMC4-225ENST00000497203 KRT26Q7Z3Y9 468 aa5.69□□□□□ -1.5
SMC4-225ENST00000497203 JAM3Q9BX67 310 aa5.69□□□□□ -1.5
SMC4-225ENST00000497203 RNF38Q9H0F5 515 aa5.69□□□□□ -1.5
SMC4-225ENST00000497203 NOP58Q9Y2X3 529 aaKnown RBP5.69□□□□□ -1.5
SMC4-225ENST00000497203 COL4A3BPQ9Y5P4 624 aa5.69□□□□□ -1.5
SMC4-225ENST00000497203 RFXAPO00287 272 aa5.68□□□□□ -1.5
SMC4-225ENST00000497203 AQP7O14520 342 aa5.68□□□□□ -1.5
SMC4-225ENST00000497203 VIL1P09327 827 aaKnown RBP5.68□□□□□ -1.5
SMC4-225ENST00000497203 GPR85P60893 370 aa5.68□□□□□ -1.5
SMC4-225ENST00000497203 FOXO4P98177 505 aa5.68□□□□□ -1.5
SMC4-225ENST00000497203 C21orf62-AS1Q17RA5 79 aa5.68□□□□□ -1.5
SMC4-225ENST00000497203 MILR1Q7Z6M3 343 aa5.68□□□□□ -1.5
SMC4-225ENST00000497203 AMIGO3Q86WK7 504 aa5.68□□□□□ -1.5
SMC4-225ENST00000497203 DHX37Q8IY37 1157 aaKnown RBP5.68□□□□□ -1.5
SMC4-225ENST00000497203 IFNL3Q8IZI9 196 aa5.68□□□□□ -1.5
SMC4-225ENST00000497203 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.68□□□□□ -1.5
SMC4-225ENST00000497203 DACT3Q96B18 629 aaPredicted RBP5.68□□□□□ -1.5
SMC4-225ENST00000497203 ZFYVE21Q9BQ24 234 aa5.68□□□□□ -1.5
SMC4-225ENST00000497203 EPB41L1Q9H4G0 881 aa5.68□□□□□ -1.5
SMC4-225ENST00000497203 NDOR1Q9UHB4 597 aa5.68□□□□□ -1.5
SMC4-225ENST00000497203 HGSO14964 777 aaPredicted RBP5.67□□□□□ -1.5
SMC4-225ENST00000497203 DGKIO75912 1065 aa5.67□□□□□ -1.5
SMC4-225ENST00000497203 MYCLP1P12525 358 aaPredicted RBP5.67□□□□□ -1.5
SMC4-225ENST00000497203 GRK2P25098 689 aa5.67□□□□□ -1.5
SMC4-225ENST00000497203 GRK3P35626 688 aa5.67□□□□□ -1.5
SMC4-225ENST00000497203 SOX5P35711 763 aa5.67□□□□□ -1.5
SMC4-225ENST00000497203 KRTAP1-1Q07627 177 aa5.67□□□□□ -1.5
SMC4-225ENST00000497203 KIZQ2M2Z5 673 aa5.67□□□□□ -1.5
SMC4-225ENST00000497203 STEAP3Q658P3 488 aa5.67□□□□□ -1.5
SMC4-225ENST00000497203 B3GNT8Q7Z7M8 397 aa5.67□□□□□ -1.5
SMC4-225ENST00000497203 GSTCDQ8NEC7 633 aa5.67□□□□□ -1.5
SMC4-225ENST00000497203 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.67□□□□□ -1.5
SMC4-225ENST00000497203 CHAC2Q8WUX2 184 aa5.67□□□□□ -1.5
SMC4-225ENST00000497203 CPA5Q8WXQ8 436 aa5.67□□□□□ -1.5
SMC4-225ENST00000497203 GPATCH3Q96I76 525 aa5.67□□□□□ -1.5
SMC4-225ENST00000497203 MAGEB10Q96LZ2 347 aaPredicted RBP5.67□□□□□ -1.5
SMC4-225ENST00000497203 SYT3Q9BQG1 590 aa5.67□□□□□ -1.5
SMC4-225ENST00000497203 PCDH12Q9NPG4 1184 aa5.67□□□□□ -1.5
SMC4-225ENST00000497203 FAN1Q9Y2M0 1017 aa5.67□□□□□ -1.5
SMC4-225ENST00000497203 TADA3O75528 432 aa5.66□□□□□ -1.5
SMC4-225ENST00000497203 PLA2G1BP04054 148 aaKnown RBP5.66□□□□□ -1.5
SMC4-225ENST00000497203 SOD2P04179 222 aa5.66□□□□□ -1.5
SMC4-225ENST00000497203 ASLP04424 464 aa5.66□□□□□ -1.5
SMC4-225ENST00000497203 C8BP07358 591 aa5.66□□□□□ -1.5
SMC4-225ENST00000497203 FLT3P36888 993 aa5.66□□□□□ -1.5
SMC4-225ENST00000497203 CACNB2Q08289 660 aaPredicted RBP5.66□□□□□ -1.5
SMC4-225ENST00000497203 EMC4Q5J8M3 183 aa5.66□□□□□ -1.5
SMC4-225ENST00000497203 BRAPQ7Z569 592 aa5.66□□□□□ -1.5
SMC4-225ENST00000497203 MIB1Q86YT6 1006 aa5.66□□□□□ -1.5
SMC4-225ENST00000497203 AHI1Q8N157 1196 aa5.66□□□□□ -1.5
SMC4-225ENST00000497203 PPM1KQ8N3J5 372 aa5.66□□□□□ -1.5
SMC4-225ENST00000497203 FAM26EQ8N5C1 309 aa5.66□□□□□ -1.5
SMC4-225ENST00000497203 SMARCC2Q8TAQ2 1214 aa5.66□□□□□ -1.5
SMC4-225ENST00000497203 SLC7A14Q8TBB6 771 aa5.66□□□□□ -1.5
SMC4-225ENST00000497203 PIP4K2CQ8TBX8 421 aa5.66□□□□□ -1.5
SMC4-225ENST00000497203 PWWP2AQ96N64 755 aa5.66□□□□□ -1.5
SMC4-225ENST00000497203 CLUHP3Q96NS8 147 aa5.66□□□□□ -1.5
SMC4-225ENST00000497203 KCNJ15Q99712 375 aa5.66□□□□□ -1.5
SMC4-225ENST00000497203 CAAP1Q9H8G2 361 aa5.66□□□□□ -1.5
SMC4-225ENST00000497203 SLC52A2Q9HAB3 445 aa5.66□□□□□ -1.5
SMC4-225ENST00000497203 TRIM39Q9HCM9 518 aa5.66□□□□□ -1.5
SMC4-225ENST00000497203 MAPRE3Q9UPY8 281 aa5.66□□□□□ -1.5
SMC4-225ENST00000497203 ZNF652Q9Y2D9 606 aa5.66□□□□□ -1.5
SMC4-225ENST00000497203 TCRBV5S2A0A599 114 aa5.65□□□□□ -1.5
SMC4-225ENST00000497203 B4E1Z4 1266 aa5.65□□□□□ -1.5
SMC4-225ENST00000497203 PDE8AO60658 829 aa5.65□□□□□ -1.5
SMC4-225ENST00000497203 COL6A2P12110 1019 aa5.65□□□□□ -1.5
SMC4-225ENST00000497203 CNGA1P29973 690 aa5.65□□□□□ -1.5
SMC4-225ENST00000497203 STAT3P40763 770 aa5.65□□□□□ -1.5
SMC4-225ENST00000497203 STAT5AP42229 794 aa5.65□□□□□ -1.5
SMC4-225ENST00000497203 AFF3P51826 1226 aaKnown RBP5.65□□□□□ -1.5
SMC4-225ENST00000497203 CHRNA2Q15822 529 aa5.65□□□□□ -1.5
SMC4-225ENST00000497203 VMACQ2NL98 169 aa5.65□□□□□ -1.5
SMC4-225ENST00000497203 TCERG1LQ5VWI1 586 aa5.65□□□□□ -1.5
SMC4-225ENST00000497203 ETV3LQ6ZN32 361 aa5.65□□□□□ -1.5
SMC4-225ENST00000497203 LRRTM3Q86VH5 581 aa5.65□□□□□ -1.5
SMC4-225ENST00000497203 THNSL2Q86YJ6 484 aa5.65□□□□□ -1.5
SMC4-225ENST00000497203 FAM126BQ8IXS8 530 aa5.65□□□□□ -1.5
SMC4-225ENST00000497203 ARRDC4Q8NCT1 418 aa5.65□□□□□ -1.5
SMC4-225ENST00000497203 NOX5Q96PH1 765 aa5.65□□□□□ -1.5
SMC4-225ENST00000497203 IPPKQ9H8X2 491 aa5.65□□□□□ -1.5
SMC4-225ENST00000497203 PCDHB4Q9Y5E5 795 aa5.65□□□□□ -1.5
SMC4-225ENST00000497203 A0A087X0B3 334 aa5.64□□□□□ -1.51
SMC4-225ENST00000497203 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.64□□□□□ -1.51
SMC4-225ENST00000497203 OPA1O60313 960 aa5.64□□□□□ -1.51
SMC4-225ENST00000497203 SDSP20132 328 aa5.64□□□□□ -1.51
SMC4-225ENST00000497203 IGFALSP35858 605 aa5.64□□□□□ -1.51
SMC4-225ENST00000497203 HTRA3P83110 453 aa5.64□□□□□ -1.51
SMC4-225ENST00000497203 CT47A1Q5JQC4 288 aaPredicted RBP5.64□□□□□ -1.51
SMC4-225ENST00000497203 CNNM4Q6P4Q7 775 aa5.64□□□□□ -1.51
SMC4-225ENST00000497203 OTOP3Q7RTS5 596 aa5.64□□□□□ -1.51
SMC4-225ENST00000497203 MTDHQ86UE4 582 aaKnown RBP5.64□□□□□ -1.51
SMC4-225ENST00000497203 RBM12BQ8IXT5 1001 aaKnown RBP5.64□□□□□ -1.51
SMC4-225ENST00000497203 FNIP1Q8TF40 1166 aa5.64□□□□□ -1.51
SMC4-225ENST00000497203 DDX11Q96FC9 970 aa5.64□□□□□ -1.51
SMC4-225ENST00000497203 ALG1Q9BT22 464 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms