RNA–Protein interactions for RNA: ENST00000497147.1

SCNM1-206, Transcript of sodium channel modifier 1, humanhuman

TSL 2

Gene SCNM1, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-206ENST00000497147 WDR11Q9BZH6 1224 aa11.32□□□□□ -0.6
SCNM1-206ENST00000497147 VTA1Q9NP79 307 aa11.32□□□□□ -0.6
SCNM1-206ENST00000497147 CYP39A1Q9NYL5 469 aa11.32□□□□□ -0.6
SCNM1-206ENST00000497147 BRPF3Q9ULD4 1205 aa11.32□□□□□ -0.6
SCNM1-206ENST00000497147 TECTAO75443 2155 aa11.32□□□□□ -0.6
SCNM1-206ENST00000497147 CCDC196A0A1B0GTZ2 297 aa11.31□□□□□ -0.6
SCNM1-206ENST00000497147 NBNO60934 754 aa11.31□□□□□ -0.6
SCNM1-206ENST00000497147 CXCL10P02778 98 aa11.31□□□□□ -0.6
SCNM1-206ENST00000497147 FDX1P10109 184 aa11.31□□□□□ -0.6
SCNM1-206ENST00000497147 LTBRP36941 435 aa11.31□□□□□ -0.6
SCNM1-206ENST00000497147 CPT1AP50416 773 aa11.31□□□□□ -0.6
SCNM1-206ENST00000497147 RCAN1P53805 252 aa11.31□□□□□ -0.6
SCNM1-206ENST00000497147 AK2P54819 239 aa11.31□□□□□ -0.6
SCNM1-206ENST00000497147 TOB2Q14106 344 aaPredicted RBP11.31□□□□□ -0.6
SCNM1-206ENST00000497147 TCEAL5Q5H9L2 206 aa11.31□□□□□ -0.6
SCNM1-206ENST00000497147 CNKSR3Q6P9H4 555 aa11.31□□□□□ -0.6
SCNM1-206ENST00000497147 STAG2Q8N3U4 1231 aa11.31□□□□□ -0.6
SCNM1-206ENST00000497147 FANCBQ8NB91 859 aa11.31□□□□□ -0.6
SCNM1-206ENST00000497147 DHX38Q92620 1227 aaKnown RBP11.31□□□□□ -0.6
SCNM1-206ENST00000497147 EDAQ92838 391 aa11.31□□□□□ -0.6
SCNM1-206ENST00000497147 LZTS2Q9BRK4 669 aa11.31□□□□□ -0.6
SCNM1-206ENST00000497147 LARP6Q9BRS8 491 aaKnown RBP11.31□□□□□ -0.6
SCNM1-206ENST00000497147 FAM86C1Q9NVL1 165 aa11.31□□□□□ -0.6
SCNM1-206ENST00000497147 RBM28Q9NW13 759 aaKnown RBP11.31□□□□□ -0.6
SCNM1-206ENST00000497147 MAD2L2Q9UI95 211 aa11.31□□□□□ -0.6
SCNM1-206ENST00000497147 PRR12Q9ULL5 1215 aa11.31□□□□□ -0.6
SCNM1-206ENST00000497147 SCN10AQ9Y5Y9 1956 aa11.3□□□□□ -0.6
SCNM1-206ENST00000497147 SIP14410 1827 aa11.3□□□□□ -0.6
SCNM1-206ENST00000497147 RBM47A0AV96 593 aaKnown RBP11.3□□□□□ -0.6
SCNM1-206ENST00000497147 PALM3A6NDB9 673 aaPredicted RBP11.3□□□□□ -0.6
SCNM1-206ENST00000497147 ALAS1P13196 640 aa11.3□□□□□ -0.6
SCNM1-206ENST00000497147 SNAP25P60880 206 aa11.3□□□□□ -0.6
SCNM1-206ENST00000497147 PTPN11Q06124 597 aaPredicted RBP11.3□□□□□ -0.6
SCNM1-206ENST00000497147 PPP2R5BQ15173 497 aa11.3□□□□□ -0.6
SCNM1-206ENST00000497147 PTGISQ16647 500 aa11.3□□□□□ -0.6
SCNM1-206ENST00000497147 BTNL9Q6UXG8 535 aa11.3□□□□□ -0.6
SCNM1-206ENST00000497147 EP400NLQ6ZTU2 488 aa11.3□□□□□ -0.6
SCNM1-206ENST00000497147 BMP8AQ7Z5Y6 402 aa11.3□□□□□ -0.6
SCNM1-206ENST00000497147 RNF135Q8IUD6 432 aa11.3□□□□□ -0.6
SCNM1-206ENST00000497147 BANK1Q8NDB2 785 aa11.3□□□□□ -0.6
SCNM1-206ENST00000497147 OR6J1Q8NGC5 347 aa11.3□□□□□ -0.6
SCNM1-206ENST00000497147 AFAP1L1Q8TED9 768 aa11.3□□□□□ -0.6
SCNM1-206ENST00000497147 ZNF274Q96GC6 653 aaPredicted RBP11.3□□□□□ -0.6
SCNM1-206ENST00000497147 UBA5Q9GZZ9 404 aa11.3□□□□□ -0.6
SCNM1-206ENST00000497147 VAT1LQ9HCJ6 419 aa11.3□□□□□ -0.6
SCNM1-206ENST00000497147 NOD1Q9Y239 953 aa11.3□□□□□ -0.6
SCNM1-206ENST00000497147 ABHD14A-ACY1A0A1B0GW23 586 aa11.29□□□□□ -0.6
SCNM1-206ENST00000497147 A6NJR5 290 aa11.29□□□□□ -0.6
SCNM1-206ENST00000497147 SELPP16109 830 aa11.29□□□□□ -0.6
SCNM1-206ENST00000497147 PDIA3P30101 505 aaKnown RBP11.29□□□□□ -0.6
SCNM1-206ENST00000497147 EVCP57679 992 aa11.29□□□□□ -0.6
SCNM1-206ENST00000497147 DLX2Q07687 328 aaPredicted RBP11.29□□□□□ -0.6
SCNM1-206ENST00000497147 STK3Q13188 491 aa11.29□□□□□ -0.6
SCNM1-206ENST00000497147 SMAD2Q15796 467 aaKnown RBP11.29□□□□□ -0.6
SCNM1-206ENST00000497147 TKFCQ3LXA3 575 aa11.29□□□□□ -0.6
SCNM1-206ENST00000497147 EPC2Q52LR7 807 aa11.29□□□□□ -0.6
SCNM1-206ENST00000497147 GDF6Q6KF10 455 aaPredicted RBP11.29□□□□□ -0.6
SCNM1-206ENST00000497147 CPLX2Q6PUV4 134 aaKnown RBP11.29□□□□□ -0.6
SCNM1-206ENST00000497147 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.29□□□□□ -0.6
SCNM1-206ENST00000497147 LRRC8DQ7L1W4 858 aa11.29□□□□□ -0.6
SCNM1-206ENST00000497147 ADGRF4Q8IZF3 695 aa11.29□□□□□ -0.6
SCNM1-206ENST00000497147 CAGE1Q8TC20 777 aa11.29□□□□□ -0.6
SCNM1-206ENST00000497147 COPS5Q92905 334 aa11.29□□□□□ -0.6
SCNM1-206ENST00000497147 PBXIP1Q96AQ6 731 aa11.29□□□□□ -0.6
SCNM1-206ENST00000497147 SLKQ9H2G2 1235 aaPredicted RBP11.29□□□□□ -0.6
SCNM1-206ENST00000497147 CPVLQ9H3G5 476 aa11.29□□□□□ -0.6
SCNM1-206ENST00000497147 LIMCH1Q9UPQ0 1083 aa11.29□□□□□ -0.6
SCNM1-206ENST00000497147 FAM50BQ9Y247 325 aa11.29□□□□□ -0.6
SCNM1-206ENST00000497147 INSL6Q9Y581 213 aa11.29□□□□□ -0.6
SCNM1-206ENST00000497147 LCTP09848 1927 aa11.29□□□□□ -0.6
SCNM1-206ENST00000497147 TMEM221A6NGB7 291 aa11.28□□□□□ -0.6
SCNM1-206ENST00000497147 M0R296 226 aa11.28□□□□□ -0.6
SCNM1-206ENST00000497147 CPLX1O14810 134 aa11.28□□□□□ -0.6
SCNM1-206ENST00000497147 PLEKHA8P1O95397 391 aa11.28□□□□□ -0.6
SCNM1-206ENST00000497147 MCM2P49736 904 aa11.28□□□□□ -0.6
SCNM1-206ENST00000497147 CHMP4BP1P59074 171 aa11.28□□□□□ -0.6
SCNM1-206ENST00000497147 CCT2P78371 535 aaKnown RBP11.28□□□□□ -0.6
SCNM1-206ENST00000497147 HTRA4P83105 476 aaPredicted RBP11.28□□□□□ -0.6
SCNM1-206ENST00000497147 RBL2Q08999 1139 aa11.28□□□□□ -0.6
SCNM1-206ENST00000497147 MKRN4PQ13434 485 aaPredicted RBP11.28□□□□□ -0.6
SCNM1-206ENST00000497147 CLUL1Q15846 466 aa11.28□□□□□ -0.6
SCNM1-206ENST00000497147 CDC37Q16543 378 aaPredicted RBP11.28□□□□□ -0.6
SCNM1-206ENST00000497147 PTPROQ16827 1216 aa11.28□□□□□ -0.6
SCNM1-206ENST00000497147 TIGD5Q53EQ6 642 aa11.28□□□□□ -0.6
SCNM1-206ENST00000497147 TRAF7Q6Q0C0 670 aa11.28□□□□□ -0.6
SCNM1-206ENST00000497147 NSMFQ6X4W1 530 aa11.28□□□□□ -0.6
SCNM1-206ENST00000497147 TRIM67Q6ZTA4 783 aa11.28□□□□□ -0.6
SCNM1-206ENST00000497147 TMTC3Q6ZXV5 915 aa11.28□□□□□ -0.6
SCNM1-206ENST00000497147 HOMER1Q86YM7 354 aa11.28□□□□□ -0.6
SCNM1-206ENST00000497147 CMTR1Q8N1G2 835 aaKnown RBP11.28□□□□□ -0.6
SCNM1-206ENST00000497147 CCDC82Q8N4S0 544 aa11.28□□□□□ -0.6
SCNM1-206ENST00000497147 SP7Q8TDD2 431 aaPredicted RBP11.28□□□□□ -0.6
SCNM1-206ENST00000497147 RRP36Q96EU6 259 aaKnown RBP11.28□□□□□ -0.6
SCNM1-206ENST00000497147 SPZ1Q9BXG8 430 aa11.28□□□□□ -0.6
SCNM1-206ENST00000497147 RANBP17Q9H2T7 1088 aaKnown RBP11.28□□□□□ -0.6
SCNM1-206ENST00000497147 CLDND1Q9NY35 253 aa11.28□□□□□ -0.6
SCNM1-206ENST00000497147 SEC63Q9UGP8 760 aaKnown RBP11.28□□□□□ -0.6
SCNM1-206ENST00000497147 PNMA2Q9UL42 364 aa11.28□□□□□ -0.6
SCNM1-206ENST00000497147 TPCN1Q9ULQ1 816 aa11.28□□□□□ -0.6
SCNM1-206ENST00000497147 NID2Q14112 1375 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms