RNA–Protein interactions for RNA: ENST00000497139.5

VEGFA-215, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 2,746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-215ENST00000497139 RASSF7Q02833 373 aa14.22□□□□□ -0.13
VEGFA-215ENST00000497139 SCARF1Q14162 830 aa14.22□□□□□ -0.13
VEGFA-215ENST00000497139 TBC1D25Q3MII6 688 aa14.22□□□□□ -0.13
VEGFA-215ENST00000497139 ESCO1Q5FWF5 840 aa14.22□□□□□ -0.13
VEGFA-215ENST00000497139 EARS2Q5JPH6 523 aaKnown RBP14.22□□□□□ -0.13
VEGFA-215ENST00000497139 BICD1Q96G01 975 aa14.22□□□□□ -0.13
VEGFA-215ENST00000497139 SLC52A2Q9HAB3 445 aa14.22□□□□□ -0.13
VEGFA-215ENST00000497139 ASB3Q9Y575 518 aa14.22□□□□□ -0.13
VEGFA-215ENST00000497139 O00370 1275 aa14.21□□□□□ -0.13
VEGFA-215ENST00000497139 GNAT1P11488 350 aa14.21□□□□□ -0.13
VEGFA-215ENST00000497139 ADORA1P30542 326 aa14.21□□□□□ -0.13
VEGFA-215ENST00000497139 PKN1Q16512 942 aa14.21□□□□□ -0.13
VEGFA-215ENST00000497139 PDXDC1Q6P996 788 aa14.21□□□□□ -0.13
VEGFA-215ENST00000497139 STRBPQ96SI9 672 aaKnown RBP14.21□□□□□ -0.13
VEGFA-215ENST00000497139 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.21□□□□□ -0.13
VEGFA-215ENST00000497139 NUDT17P0C025 328 aa14.21□□□□□ -0.13
VEGFA-215ENST00000497139 GBP1P32455 592 aa14.21□□□□□ -0.13
VEGFA-215ENST00000497139 PDE6CP51160 858 aa14.21□□□□□ -0.13
VEGFA-215ENST00000497139 COPS2P61201 443 aa14.21□□□□□ -0.13
VEGFA-215ENST00000497139 LAMB3Q13751 1172 aa14.21□□□□□ -0.13
VEGFA-215ENST00000497139 TRADDQ15628 312 aa14.21□□□□□ -0.13
VEGFA-215ENST00000497139 VWA3BQ502W6 1294 aa14.21□□□□□ -0.13
VEGFA-215ENST00000497139 KLHL23Q8NBE8 558 aa14.21□□□□□ -0.13
VEGFA-215ENST00000497139 CFAP61Q8NHU2 1237 aa14.21□□□□□ -0.13
VEGFA-215ENST00000497139 BORCS6Q96GS4 357 aa14.21□□□□□ -0.13
VEGFA-215ENST00000497139 NAPBQ9H115 298 aa14.21□□□□□ -0.13
VEGFA-215ENST00000497139 ECT2Q9H8V3 914 aa14.21□□□□□ -0.13
VEGFA-215ENST00000497139 BACH1O14867 736 aa14.21□□□□□ -0.14
VEGFA-215ENST00000497139 BUB1O43683 1085 aa14.21□□□□□ -0.14
VEGFA-215ENST00000497139 CAND2O75155 1236 aa14.21□□□□□ -0.14
VEGFA-215ENST00000497139 PPFIA2O75334 1257 aa14.21□□□□□ -0.14
VEGFA-215ENST00000497139 FGFR1OPO95684 399 aaKnown RBP14.21□□□□□ -0.14
VEGFA-215ENST00000497139 OAS1P00973 400 aaKnown RBP14.21□□□□□ -0.14
VEGFA-215ENST00000497139 CHN1P15882 459 aa14.21□□□□□ -0.14
VEGFA-215ENST00000497139 ALDH3A1P30838 453 aa14.21□□□□□ -0.14
VEGFA-215ENST00000497139 SLC1A4P43007 532 aa14.21□□□□□ -0.14
VEGFA-215ENST00000497139 MSH2P43246 934 aa14.21□□□□□ -0.14
VEGFA-215ENST00000497139 BNIP1Q12981 228 aa14.21□□□□□ -0.14
VEGFA-215ENST00000497139 TCIRG1Q13488 830 aa14.21□□□□□ -0.14
VEGFA-215ENST00000497139 ERICH1Q86X53 443 aa14.21□□□□□ -0.14
VEGFA-215ENST00000497139 BAP1Q92560 729 aa14.21□□□□□ -0.14
VEGFA-215ENST00000497139 INCENPQ9NQS7 918 aa14.21□□□□□ -0.14
VEGFA-215ENST00000497139 KBTBD4Q9NVX7 518 aa14.21□□□□□ -0.14
VEGFA-215ENST00000497139 AGAP1Q9UPQ3 857 aa14.21□□□□□ -0.14
VEGFA-215ENST00000497139 C1orf167Q5SNV9 1468 aa14.2□□□□□ -0.14
VEGFA-215ENST00000497139 LRRC53A6NM62 1247 aa14.2□□□□□ -0.14
VEGFA-215ENST00000497139 IGF2BP3O00425 579 aaKnown RBP eCLIP14.2□□□□□ -0.14
VEGFA-215ENST00000497139 EVI5O60447 810 aa14.2□□□□□ -0.14
VEGFA-215ENST00000497139 KCNJ2P63252 427 aa14.2□□□□□ -0.14
VEGFA-215ENST00000497139 MAP3K12Q12852 859 aa14.2□□□□□ -0.14
VEGFA-215ENST00000497139 FAM133BQ5BKY9 247 aaKnown RBP14.2□□□□□ -0.14
VEGFA-215ENST00000497139 KLHL7Q8IXQ5 586 aa14.2□□□□□ -0.14
VEGFA-215ENST00000497139 KLHL29Q96CT2 875 aa14.2□□□□□ -0.14
VEGFA-215ENST00000497139 SHISA4Q96DD7 197 aa14.2□□□□□ -0.14
VEGFA-215ENST00000497139 RAB3IPQ96QF0 476 aaPredicted RBP14.2□□□□□ -0.14
VEGFA-215ENST00000497139 STMN4Q9H169 189 aaPredicted RBP14.2□□□□□ -0.14
VEGFA-215ENST00000497139 RNF41Q9H4P4 317 aaPredicted RBP14.2□□□□□ -0.14
VEGFA-215ENST00000497139 PNPLA7Q6ZV29 1317 aa14.2□□□□□ -0.14
VEGFA-215ENST00000497139 DYNC1I2Q13409 638 aaKnown RBP14.2□□□□□ -0.14
VEGFA-215ENST00000497139 SNX1Q13596 522 aa14.2□□□□□ -0.14
VEGFA-215ENST00000497139 MAN2A1Q16706 1144 aa14.2□□□□□ -0.14
VEGFA-215ENST00000497139 SLC9C1Q4G0N8 1177 aa14.2□□□□□ -0.14
VEGFA-215ENST00000497139 LRRC34Q8IZ02 419 aa14.2□□□□□ -0.14
VEGFA-215ENST00000497139 EZH1Q92800 747 aaPredicted RBP14.2□□□□□ -0.14
VEGFA-215ENST00000497139 SPDYE3A6NKU9 549 aa14.19□□□□□ -0.14
VEGFA-215ENST00000497139 CCDC169A6NNP5 214 aa14.19□□□□□ -0.14
VEGFA-215ENST00000497139 DCDC2CA8MYV0 355 aa14.19□□□□□ -0.14
VEGFA-215ENST00000497139 WNT7AO00755 349 aa14.19□□□□□ -0.14
VEGFA-215ENST00000497139 HIP1RO75146 1068 aa14.19□□□□□ -0.14
VEGFA-215ENST00000497139 UBOX5O94941 541 aa14.19□□□□□ -0.14
VEGFA-215ENST00000497139 SERPING1P05155 500 aa14.19□□□□□ -0.14
VEGFA-215ENST00000497139 MXRA7P84157 204 aa14.19□□□□□ -0.14
VEGFA-215ENST00000497139 ASRGL1Q7L266 308 aa14.19□□□□□ -0.14
VEGFA-215ENST00000497139 RRAGAQ7L523 313 aa14.19□□□□□ -0.14
VEGFA-215ENST00000497139 IFNL3Q8IZI9 196 aa14.19□□□□□ -0.14
VEGFA-215ENST00000497139 ZNF594Q96JF6 807 aaPredicted RBP14.19□□□□□ -0.14
VEGFA-215ENST00000497139 TXLNGYQ9BZA5 131 aa14.19□□□□□ -0.14
VEGFA-215ENST00000497139 CHCHD3Q9NX63 227 aaKnown RBP14.19□□□□□ -0.14
VEGFA-215ENST00000497139 ADAM22Q9P0K1 906 aa14.19□□□□□ -0.14
VEGFA-215ENST00000497139 BCL9O00512 1426 aa14.19□□□□□ -0.14
VEGFA-215ENST00000497139 ATP8B3O60423 1300 aa14.19□□□□□ -0.14
VEGFA-215ENST00000497139 ZNF532Q9HCE3 1301 aa14.19□□□□□ -0.14
VEGFA-215ENST00000497139 PGRMC1O00264 195 aaKnown RBP14.19□□□□□ -0.14
VEGFA-215ENST00000497139 SNX3O60493 162 aa14.19□□□□□ -0.14
VEGFA-215ENST00000497139 BAG3O95817 575 aa14.19□□□□□ -0.14
VEGFA-215ENST00000497139 GFPT1Q06210 699 aaPredicted RBP14.19□□□□□ -0.14
VEGFA-215ENST00000497139 RPS6KA1Q15418 735 aa14.19□□□□□ -0.14
VEGFA-215ENST00000497139 IL17AQ16552 155 aa14.19□□□□□ -0.14
VEGFA-215ENST00000497139 C10orf76Q5T2E6 689 aa14.19□□□□□ -0.14
VEGFA-215ENST00000497139 HGSNATQ68CP4 663 aa14.19□□□□□ -0.14
VEGFA-215ENST00000497139 ANKRD40Q6AI12 368 aa14.19□□□□□ -0.14
VEGFA-215ENST00000497139 DZIP3Q86Y13 1208 aaKnown RBP14.19□□□□□ -0.14
VEGFA-215ENST00000497139 FBF1Q8TES7 1133 aa14.19□□□□□ -0.14
VEGFA-215ENST00000497139 TEKT4Q8WW24 435 aa14.19□□□□□ -0.14
VEGFA-215ENST00000497139 LRRC59Q96AG4 307 aaKnown RBP14.19□□□□□ -0.14
VEGFA-215ENST00000497139 PUS3Q9BZE2 481 aaKnown RBP14.19□□□□□ -0.14
VEGFA-215ENST00000497139 WDR35Q9P2L0 1181 aa14.19□□□□□ -0.14
VEGFA-215ENST00000497139 USP15Q9Y4E8 981 aaPredicted RBP14.19□□□□□ -0.14
VEGFA-215ENST00000497139 TCRBV5S4A2TA0A5A2 114 aa14.18□□□□□ -0.14
VEGFA-215ENST00000497139 DPPA5A6NC42 116 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms