RNA–Protein interactions for RNA: ENST00000496633.1

CDHR3-214, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 949 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-214ENST00000496633 FPGSQ05932 587 aa8.66□□□□□ -1.02
CDHR3-214ENST00000496633 TRIM29Q14134 588 aa8.66□□□□□ -1.02
CDHR3-214ENST00000496633 LRIT3Q3SXY7 679 aa8.66□□□□□ -1.02
CDHR3-214ENST00000496633 CEP55Q53EZ4 464 aa8.66□□□□□ -1.02
CDHR3-214ENST00000496633 FAM47CQ5HY64 1035 aa8.66□□□□□ -1.02
CDHR3-214ENST00000496633 MFSD5Q6N075 450 aa8.66□□□□□ -1.02
CDHR3-214ENST00000496633 PSRC1Q6PGN9 363 aaPredicted RBP8.66□□□□□ -1.02
CDHR3-214ENST00000496633 RAB11FIP4Q86YS3 637 aa8.66□□□□□ -1.02
CDHR3-214ENST00000496633 RETREG2Q8NC44 543 aa8.66□□□□□ -1.02
CDHR3-214ENST00000496633 MXRA8Q9BRK3 442 aa8.66□□□□□ -1.02
CDHR3-214ENST00000496633 ANO3Q9BYT9 981 aa8.66□□□□□ -1.02
CDHR3-214ENST00000496633 PRO3102Q9H379 93 aa8.66□□□□□ -1.02
CDHR3-214ENST00000496633 SH2B1Q9NRF2 756 aaPredicted RBP8.66□□□□□ -1.02
CDHR3-214ENST00000496633 TBC1D22BQ9NU19 505 aa8.66□□□□□ -1.02
CDHR3-214ENST00000496633 TBX21Q9UL17 535 aa8.66□□□□□ -1.02
CDHR3-214ENST00000496633 PCDHA4Q9UN74 947 aa8.66□□□□□ -1.02
CDHR3-214ENST00000496633 LIMCH1Q9UPQ0 1083 aa8.66□□□□□ -1.02
CDHR3-214ENST00000496633 UBIAD1Q9Y5Z9 338 aa8.66□□□□□ -1.02
CDHR3-214ENST00000496633 H3BRB1 525 aa8.65□□□□□ -1.02
CDHR3-214ENST00000496633 CAND2O75155 1236 aa8.65□□□□□ -1.02
CDHR3-214ENST00000496633 RBM25P49756 843 aaKnown RBP8.65□□□□□ -1.02
CDHR3-214ENST00000496633 ARHGAP4P98171 946 aa8.65□□□□□ -1.02
CDHR3-214ENST00000496633 RABEP1Q15276 862 aa8.65□□□□□ -1.02
CDHR3-214ENST00000496633 PKN1Q16512 942 aa8.65□□□□□ -1.02
CDHR3-214ENST00000496633 NBPF20Q3BBV1 942 aa8.65□□□□□ -1.02
CDHR3-214ENST00000496633 MOXD1Q6UVY6 613 aa8.65□□□□□ -1.02
CDHR3-214ENST00000496633 DAGLBQ8NCG7 672 aa8.65□□□□□ -1.02
CDHR3-214ENST00000496633 AFAP1L1Q8TED9 768 aa8.65□□□□□ -1.02
CDHR3-214ENST00000496633 SEPT1Q8WYJ6 367 aa8.65□□□□□ -1.02
CDHR3-214ENST00000496633 PHKBQ93100 1093 aa8.65□□□□□ -1.02
CDHR3-214ENST00000496633 LLPHQ9BRT6 129 aaKnown RBP8.65□□□□□ -1.02
CDHR3-214ENST00000496633 HIPK3Q9H422 1215 aa8.65□□□□□ -1.02
CDHR3-214ENST00000496633 SMARCAD1Q9H4L7 1026 aa8.65□□□□□ -1.02
CDHR3-214ENST00000496633 TUT1Q9H6E5 874 aaKnown RBP8.65□□□□□ -1.02
CDHR3-214ENST00000496633 AZI2Q9H6S1 392 aa8.65□□□□□ -1.02
CDHR3-214ENST00000496633 JPH1Q9HDC5 661 aaPredicted RBP8.65□□□□□ -1.02
CDHR3-214ENST00000496633 SCN10AQ9Y5Y9 1956 aa8.64□□□□□ -1.03
CDHR3-214ENST00000496633 NRCAMQ92823 1304 aa8.64□□□□□ -1.03
CDHR3-214ENST00000496633 hCG_1642624A0A1W2PR95 340 aa8.64□□□□□ -1.03
CDHR3-214ENST00000496633 MEIS1O00470 390 aa8.64□□□□□ -1.03
CDHR3-214ENST00000496633 EFCAB14O75071 495 aa8.64□□□□□ -1.03
CDHR3-214ENST00000496633 RGS20O76081 388 aa8.64□□□□□ -1.03
CDHR3-214ENST00000496633 ACTN1P12814 892 aa8.64□□□□□ -1.03
CDHR3-214ENST00000496633 GCFC2P16383 781 aaKnown RBP8.64□□□□□ -1.03
CDHR3-214ENST00000496633 PSEN2P49810 448 aa8.64□□□□□ -1.03
CDHR3-214ENST00000496633 AK2P54819 239 aa8.64□□□□□ -1.03
CDHR3-214ENST00000496633 HMGN5P82970 282 aaKnown RBP8.64□□□□□ -1.03
CDHR3-214ENST00000496633 MDM2Q00987 491 aaPredicted RBP8.64□□□□□ -1.03
CDHR3-214ENST00000496633 PTK7Q13308 1070 aa8.64□□□□□ -1.03
CDHR3-214ENST00000496633 COL9A3Q14050 684 aaPredicted RBP8.64□□□□□ -1.03
CDHR3-214ENST00000496633 MFSD10Q14728 455 aa8.64□□□□□ -1.03
CDHR3-214ENST00000496633 SAFBQ15424 915 aaKnown RBP eCLIP8.64□□□□□ -1.03
CDHR3-214ENST00000496633 PTGISQ16647 500 aa8.64□□□□□ -1.03
CDHR3-214ENST00000496633 UBE2SQ16763 222 aa8.64□□□□□ -1.03
CDHR3-214ENST00000496633 KIAA0753Q2KHM9 967 aa8.64□□□□□ -1.03
CDHR3-214ENST00000496633 HSDL1Q3SXM5 330 aa8.64□□□□□ -1.03
CDHR3-214ENST00000496633 FAM160B1Q5W0V3 765 aa8.64□□□□□ -1.03
CDHR3-214ENST00000496633 CYFIP1Q7L576 1253 aa8.64□□□□□ -1.03
CDHR3-214ENST00000496633 KRT25Q7Z3Z0 450 aa8.64□□□□□ -1.03
CDHR3-214ENST00000496633 SMAP1Q8IYB5 467 aaPredicted RBP8.64□□□□□ -1.03
CDHR3-214ENST00000496633 BLIDQ8IZY5 108 aa8.64□□□□□ -1.03
CDHR3-214ENST00000496633 ZNF710Q8N1W2 664 aa8.64□□□□□ -1.03
CDHR3-214ENST00000496633 IL31RAQ8NI17 732 aa8.64□□□□□ -1.03
CDHR3-214ENST00000496633 COPS5Q92905 334 aa8.64□□□□□ -1.03
CDHR3-214ENST00000496633 KCNH7Q9NS40 1196 aa8.64□□□□□ -1.03
CDHR3-214ENST00000496633 ERAP1Q9NZ08 941 aa8.64□□□□□ -1.03
CDHR3-214ENST00000496633 RTEL1Q9NZ71 1219 aa8.64□□□□□ -1.03
CDHR3-214ENST00000496633 SLC9A2Q9UBY0 812 aa8.64□□□□□ -1.03
CDHR3-214ENST00000496633 GTF2IRD1Q9UHL9 959 aa8.64□□□□□ -1.03
CDHR3-214ENST00000496633 RANBP2P49792 3224 aaKnown RBP8.64□□□□□ -1.03
CDHR3-214ENST00000496633 EMSYQ7Z589 1322 aa8.63□□□□□ -1.03
CDHR3-214ENST00000496633 MYH7BA7E2Y1 1941 aa8.63□□□□□ -1.03
CDHR3-214ENST00000496633 CCDC194A0A1B0GVG4 234 aa8.63□□□□□ -1.03
CDHR3-214ENST00000496633 TRIM43BA6NCK2 446 aa8.63□□□□□ -1.03
CDHR3-214ENST00000496633 RRN3P2A6NIE6 340 aa8.63□□□□□ -1.03
CDHR3-214ENST00000496633 HAS3O00219 553 aa8.63□□□□□ -1.03
CDHR3-214ENST00000496633 B4GALT4O60513 344 aa8.63□□□□□ -1.03
CDHR3-214ENST00000496633 DKC1O60832 514 aaKnown RBP eCLIP8.63□□□□□ -1.03
CDHR3-214ENST00000496633 LGALS2P05162 132 aa8.63□□□□□ -1.03
CDHR3-214ENST00000496633 KCNA2P16389 499 aa8.63□□□□□ -1.03
CDHR3-214ENST00000496633 ITGB5P18084 799 aa8.63□□□□□ -1.03
CDHR3-214ENST00000496633 CIITAP33076 1130 aa8.63□□□□□ -1.03
CDHR3-214ENST00000496633 KRT76Q01546 638 aa8.63□□□□□ -1.03
CDHR3-214ENST00000496633 SCRN1Q12765 414 aa8.63□□□□□ -1.03
CDHR3-214ENST00000496633 STK3Q13188 491 aa8.63□□□□□ -1.03
CDHR3-214ENST00000496633 NONOQ15233 471 aaKnown RBP eCLIP8.63□□□□□ -1.03
CDHR3-214ENST00000496633 C8orf34Q49A92 452 aa8.63□□□□□ -1.03
CDHR3-214ENST00000496633 JAKMIP3Q5VZ66 844 aa8.63□□□□□ -1.03
CDHR3-214ENST00000496633 MIS18BP1Q6P0N0 1132 aa8.63□□□□□ -1.03
CDHR3-214ENST00000496633 TAF2Q6P1X5 1199 aa8.63□□□□□ -1.03
CDHR3-214ENST00000496633 PLPPR4Q7Z2D5 763 aa8.63□□□□□ -1.03
CDHR3-214ENST00000496633 RSPH3Q86UC2 560 aa8.63□□□□□ -1.03
CDHR3-214ENST00000496633 RDM1Q8NG50 284 aa8.63□□□□□ -1.03
CDHR3-214ENST00000496633 GLG1Q92896 1179 aa8.63□□□□□ -1.03
CDHR3-214ENST00000496633 BADQ92934 168 aa8.63□□□□□ -1.03
CDHR3-214ENST00000496633 GTF3C6Q969F1 213 aa8.63□□□□□ -1.03
CDHR3-214ENST00000496633 TRIM43Q96BQ3 446 aaPredicted RBP8.63□□□□□ -1.03
CDHR3-214ENST00000496633 GPR20Q99678 358 aa8.63□□□□□ -1.03
CDHR3-214ENST00000496633 NCOA5Q9HCD5 579 aaKnown RBP8.63□□□□□ -1.03
CDHR3-214ENST00000496633 IL23AQ9NPF7 189 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms