RNA–Protein interactions for RNA: ENST00000496325.5

PRKCZ-222, Transcript of protein kinase C zeta, human

TSL 4

Gene PRKCZ, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCZ-222	ENST00000496325	PURA	Q00577	322 aa	Known RBP	18.14	■□□□□ 0.49
PRKCZ-222	ENST00000496325	ANKRD33	Q7Z3H0	272 aa		18.14	■□□□□ 0.49
PRKCZ-222	ENST00000496325	NECAB1	Q8N987	351 aa		18.14	■□□□□ 0.49
PRKCZ-222	ENST00000496325	AIFM3	Q96NN9	605 aa		18.14	■□□□□ 0.49
PRKCZ-222	ENST00000496325	ZMYND12	Q9H0C1	365 aa		18.14	■□□□□ 0.49
PRKCZ-222	ENST00000496325	EPHX3	Q9H6B9	360 aa		18.14	■□□□□ 0.49
PRKCZ-222	ENST00000496325	VPS54	Q9P1Q0	977 aa		18.14	■□□□□ 0.49
PRKCZ-222	ENST00000496325	TBX21	Q9UL17	535 aa		18.14	■□□□□ 0.49
PRKCZ-222	ENST00000496325		A0A0U1RQG5	324 aa	Predicted RBP	18.13	■□□□□ 0.49
PRKCZ-222	ENST00000496325	ESYT2	A0FGR8	921 aa		18.13	■□□□□ 0.49
PRKCZ-222	ENST00000496325	SPATA31C2	B4DYI2	1134 aa		18.13	■□□□□ 0.49
PRKCZ-222	ENST00000496325	ARVCF	O00192	962 aa		18.13	■□□□□ 0.49
PRKCZ-222	ENST00000496325	STAM2	O75886	525 aa		18.13	■□□□□ 0.49
PRKCZ-222	ENST00000496325	CTDNEP1	O95476	244 aa		18.13	■□□□□ 0.49
PRKCZ-222	ENST00000496325	MMP3	P08254	477 aa		18.13	■□□□□ 0.49
PRKCZ-222	ENST00000496325	CSF2RA	P15509	400 aa		18.13	■□□□□ 0.49
PRKCZ-222	ENST00000496325	UBA1	P22314	1058 aa	Known RBP	18.13	■□□□□ 0.49
PRKCZ-222	ENST00000496325	ICAM3	P32942	547 aa		18.13	■□□□□ 0.49
PRKCZ-222	ENST00000496325	KCNQ1	P51787	676 aa		18.13	■□□□□ 0.49
PRKCZ-222	ENST00000496325	MYSM1	Q5VVJ2	828 aa		18.13	■□□□□ 0.49
PRKCZ-222	ENST00000496325	JAKMIP3	Q5VZ66	844 aa		18.13	■□□□□ 0.49
PRKCZ-222	ENST00000496325	KCNV1	Q6PIU1	500 aa		18.13	■□□□□ 0.49
PRKCZ-222	ENST00000496325	DHX37	Q8IY37	1157 aa	Known RBP	18.13	■□□□□ 0.49
PRKCZ-222	ENST00000496325	TRIM22	Q8IYM9	498 aa		18.13	■□□□□ 0.49
PRKCZ-222	ENST00000496325	PPP1R13L	Q8WUF5	828 aa		18.13	■□□□□ 0.49
PRKCZ-222	ENST00000496325	ANO3	Q9BYT9	981 aa		18.13	■□□□□ 0.49
PRKCZ-222	ENST00000496325	POLR3E	Q9NVU0	708 aa		18.13	■□□□□ 0.49
PRKCZ-222	ENST00000496325	CABYR	O75952	493 aa		18.12	■□□□□ 0.49
PRKCZ-222	ENST00000496325	GGPS1	O95749	300 aa		18.12	■□□□□ 0.49
PRKCZ-222	ENST00000496325	FOS	P01100	380 aa	Predicted RBP	18.12	■□□□□ 0.49
PRKCZ-222	ENST00000496325	TGFB3	P10600	412 aa		18.12	■□□□□ 0.49
PRKCZ-222	ENST00000496325	ITGB5	P18084	799 aa		18.12	■□□□□ 0.49
PRKCZ-222	ENST00000496325	RBM25	P49756	843 aa	Known RBP	18.12	■□□□□ 0.49
PRKCZ-222	ENST00000496325	ITGA7	Q13683	1181 aa		18.12	■□□□□ 0.49
PRKCZ-222	ENST00000496325	GNPTAB	Q3T906	1256 aa		18.12	■□□□□ 0.49
PRKCZ-222	ENST00000496325	CELF3	Q5SZQ8	465 aa	Known RBP	18.12	■□□□□ 0.49
PRKCZ-222	ENST00000496325	XRRA1	Q6P2D8	792 aa		18.12	■□□□□ 0.49
PRKCZ-222	ENST00000496325	CPLX2	Q6PUV4	134 aa	Known RBP	18.12	■□□□□ 0.49
PRKCZ-222	ENST00000496325	SLC43A3	Q8NBI5	491 aa		18.12	■□□□□ 0.49
PRKCZ-222	ENST00000496325	EMID1	Q96A84	441 aa	Predicted RBP	18.12	■□□□□ 0.49
PRKCZ-222	ENST00000496325	LRFN3	Q9BTN0	628 aa		18.12	■□□□□ 0.49
PRKCZ-222	ENST00000496325	NKX2-4	Q9H2Z4	354 aa		18.12	■□□□□ 0.49
PRKCZ-222	ENST00000496325	C6orf50	Q9HD87	102 aa		18.12	■□□□□ 0.49
PRKCZ-222	ENST00000496325	CXXC1	Q9P0U4	656 aa	Predicted RBP	18.12	■□□□□ 0.49
PRKCZ-222	ENST00000496325	YBX2	Q9Y2T7	364 aa	Known RBP	18.12	■□□□□ 0.49
PRKCZ-222	ENST00000496325	TELO2	Q9Y4R8	837 aa		18.12	■□□□□ 0.49
PRKCZ-222	ENST00000496325	UBIAD1	Q9Y5Z9	338 aa		18.12	■□□□□ 0.49
PRKCZ-222	ENST00000496325	MYH9	P35579	1960 aa	Known RBP	18.11	■□□□□ 0.49
PRKCZ-222	ENST00000496325	DCDC2C	A8MYV0	355 aa		18.11	■□□□□ 0.49
PRKCZ-222	ENST00000496325	DEXI	O95424	95 aa		18.11	■□□□□ 0.49
PRKCZ-222	ENST00000496325	LAMC2	Q13753	1193 aa		18.11	■□□□□ 0.49
PRKCZ-222	ENST00000496325	BRDT	Q58F21	947 aa	Predicted RBP	18.11	■□□□□ 0.49
PRKCZ-222	ENST00000496325	MFSD5	Q6N075	450 aa		18.11	■□□□□ 0.49
PRKCZ-222	ENST00000496325	ZNF365	Q70YC5	407 aa		18.11	■□□□□ 0.49
PRKCZ-222	ENST00000496325	IL27	Q8NEV9	243 aa		18.11	■□□□□ 0.49
PRKCZ-222	ENST00000496325	CYP2W1	Q8TAV3	490 aa		18.11	■□□□□ 0.49
PRKCZ-222	ENST00000496325	RASGRP4	Q8TDF6	673 aa		18.11	■□□□□ 0.49
PRKCZ-222	ENST00000496325	CCDC12	Q8WUD4	166 aa	Predicted RBP	18.11	■□□□□ 0.49
PRKCZ-222	ENST00000496325	TOX2	Q96NM4	488 aa		18.11	■□□□□ 0.49
PRKCZ-222	ENST00000496325	MTG1	Q9BT17	334 aa	Predicted RBP	18.11	■□□□□ 0.49
PRKCZ-222	ENST00000496325	C1QTNF1	Q9BXJ1	281 aa		18.11	■□□□□ 0.49
PRKCZ-222	ENST00000496325	GLT8D2	Q9H1C3	349 aa		18.11	■□□□□ 0.49
PRKCZ-222	ENST00000496325	SCN5A	Q14524	2016 aa		18.1	■□□□□ 0.49
PRKCZ-222	ENST00000496325	FIBP	O43427	364 aa		18.1	■□□□□ 0.49
PRKCZ-222	ENST00000496325	ATP9A	O75110	1047 aa		18.1	■□□□□ 0.49
PRKCZ-222	ENST00000496325	ST3GAL1	Q11201	340 aa		18.1	■□□□□ 0.49
PRKCZ-222	ENST00000496325	AP3B2	Q13367	1082 aa		18.1	■□□□□ 0.49
PRKCZ-222	ENST00000496325	HSDL1	Q3SXM5	330 aa		18.1	■□□□□ 0.49
PRKCZ-222	ENST00000496325	NLRX1	Q86UT6	975 aa		18.1	■□□□□ 0.49
PRKCZ-222	ENST00000496325	TEX2	Q8IWB9	1127 aa		18.1	■□□□□ 0.49
PRKCZ-222	ENST00000496325	FAM126B	Q8IXS8	530 aa		18.1	■□□□□ 0.49
PRKCZ-222	ENST00000496325	MICALL1	Q8N3F8	863 aa		18.1	■□□□□ 0.49
PRKCZ-222	ENST00000496325	GTF3C6	Q969F1	213 aa		18.1	■□□□□ 0.49
PRKCZ-222	ENST00000496325	EHMT1	Q9H9B1	1298 aa		18.1	■□□□□ 0.49
PRKCZ-222	ENST00000496325	SH3GLB2	Q9NR46	395 aa		18.1	■□□□□ 0.49
PRKCZ-222	ENST00000496325	PRRC2B	Q5JSZ5	2229 aa	Known RBP	18.1	■□□□□ 0.49
PRKCZ-222	ENST00000496325	KPNA6	O60684	536 aa		18.09	■□□□□ 0.49
PRKCZ-222	ENST00000496325	GNA11	P29992	359 aa		18.09	■□□□□ 0.49
PRKCZ-222	ENST00000496325	SREBF1	P36956	1147 aa		18.09	■□□□□ 0.49
PRKCZ-222	ENST00000496325	NLRP5	P59047	1200 aa		18.09	■□□□□ 0.49
PRKCZ-222	ENST00000496325	NBPF20	Q3BBV1	942 aa		18.09	■□□□□ 0.49
PRKCZ-222	ENST00000496325	CYFIP1	Q7L576	1253 aa		18.09	■□□□□ 0.49
PRKCZ-222	ENST00000496325	REXO1	Q8N1G1	1221 aa	Known RBP	18.09	■□□□□ 0.49
PRKCZ-222	ENST00000496325	CCDC148	Q8NFR7	591 aa		18.09	■□□□□ 0.49
PRKCZ-222	ENST00000496325	PPTC7	Q8NI37	304 aa		18.09	■□□□□ 0.49
PRKCZ-222	ENST00000496325	KAT2B	Q92831	832 aa		18.09	■□□□□ 0.49
PRKCZ-222	ENST00000496325	GPRASP2	Q96D09	838 aa		18.09	■□□□□ 0.49
PRKCZ-222	ENST00000496325	SPATA33	Q96N06	139 aa		18.09	■□□□□ 0.49
PRKCZ-222	ENST00000496325	MXRA8	Q9BRK3	442 aa		18.09	■□□□□ 0.49
PRKCZ-222	ENST00000496325	PPP1R12C	Q9BZL4	782 aa		18.09	■□□□□ 0.49
PRKCZ-222	ENST00000496325	MLXIP	Q9HAP2	919 aa		18.09	■□□□□ 0.49
PRKCZ-222	ENST00000496325	JADE2	Q9NQC1	790 aa		18.09	■□□□□ 0.49
PRKCZ-222	ENST00000496325	GJB4	Q9NTQ9	266 aa		18.09	■□□□□ 0.49
PRKCZ-222	ENST00000496325	MROH7	Q68CQ1	1323 aa		18.08	■□□□□ 0.49
PRKCZ-222	ENST00000496325	STK36	Q9NRP7	1315 aa		18.08	■□□□□ 0.49
PRKCZ-222	ENST00000496325	CDKL5	O76039	1030 aa		18.08	■□□□□ 0.48
PRKCZ-222	ENST00000496325	CD4	P01730	458 aa		18.08	■□□□□ 0.48
PRKCZ-222	ENST00000496325	FDPS	P14324	419 aa	Known RBP	18.08	■□□□□ 0.48
PRKCZ-222	ENST00000496325	CHMP4BP1	P59074	171 aa		18.08	■□□□□ 0.48
PRKCZ-222	ENST00000496325	PPIG	Q13427	754 aa	Known RBP eCLIP	18.08	■□□□□ 0.48	1e-14	■□□□□ 10.6

Retrieved 100 of 20,778 RNA–protein pairs in 61 ms