RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.43□□□□□ -0.58
SMARCAL1-213ENST00000496037 SLC4A5Q9BY07 1137 aa11.43□□□□□ -0.58
SMARCAL1-213ENST00000496037 CCDC8Q9H0W5 538 aaPredicted RBP11.43□□□□□ -0.58
SMARCAL1-213ENST00000496037 ARMT1Q9H993 441 aa11.43□□□□□ -0.58
SMARCAL1-213ENST00000496037 DLL3Q9NYJ7 618 aa11.43□□□□□ -0.58
SMARCAL1-213ENST00000496037 CLIP2Q9UDT6 1046 aa11.43□□□□□ -0.58
SMARCAL1-213ENST00000496037 GTF2IRD1Q9UHL9 959 aa11.43□□□□□ -0.58
SMARCAL1-213ENST00000496037 BARX2Q9UMQ3 279 aaPredicted RBP11.43□□□□□ -0.58
SMARCAL1-213ENST00000496037 BMP3P12645 472 aa11.42□□□□□ -0.58
SMARCAL1-213ENST00000496037 BMPR1AP36894 532 aa11.42□□□□□ -0.58
SMARCAL1-213ENST00000496037 TRAF7Q6Q0C0 670 aa11.42□□□□□ -0.58
SMARCAL1-213ENST00000496037 KREMEN2Q8NCW0 462 aa11.42□□□□□ -0.58
SMARCAL1-213ENST00000496037 SEPT8Q92599 483 aa11.42□□□□□ -0.58
SMARCAL1-213ENST00000496037 COPS5Q92905 334 aa11.42□□□□□ -0.58
SMARCAL1-213ENST00000496037 PURBQ96QR8 312 aaKnown RBP11.42□□□□□ -0.58
SMARCAL1-213ENST00000496037 SEMA4AQ9H3S1 761 aa11.42□□□□□ -0.58
SMARCAL1-213ENST00000496037 NOB1Q9ULX3 412 aaKnown RBP11.42□□□□□ -0.58
SMARCAL1-213ENST00000496037 PCDHGC5Q9Y5F6 944 aa11.42□□□□□ -0.58
SMARCAL1-213ENST00000496037 ATG2AQ2TAZ0 1938 aa11.41□□□□□ -0.58
SMARCAL1-213ENST00000496037 ATRXP46100 2492 aa11.41□□□□□ -0.58
SMARCAL1-213ENST00000496037 RSPH10B2B2RC85 870 aa11.41□□□□□ -0.58
SMARCAL1-213ENST00000496037 PPP1R3GB7ZBB8 358 aa11.41□□□□□ -0.58
SMARCAL1-213ENST00000496037 TMEM232C9JQI7 657 aa11.41□□□□□ -0.58
SMARCAL1-213ENST00000496037 PRKAB2O43741 272 aa11.41□□□□□ -0.58
SMARCAL1-213ENST00000496037 MBD4O95243 580 aa11.41□□□□□ -0.58
SMARCAL1-213ENST00000496037 RSPH10BP0C881 870 aa11.41□□□□□ -0.58
SMARCAL1-213ENST00000496037 TXNP10599 105 aaKnown RBP11.41□□□□□ -0.58
SMARCAL1-213ENST00000496037 ACAP1Q15027 740 aa11.41□□□□□ -0.58
SMARCAL1-213ENST00000496037 PLEKHG4Q58EX7 1191 aa11.41□□□□□ -0.58
SMARCAL1-213ENST00000496037 MUM1L1Q5H9M0 696 aa11.41□□□□□ -0.58
SMARCAL1-213ENST00000496037 C6orf132Q5T0Z8 1188 aa11.41□□□□□ -0.58
SMARCAL1-213ENST00000496037 FAM160B2Q86V87 743 aa11.41□□□□□ -0.58
SMARCAL1-213ENST00000496037 CHURC1Q8WUH1 139 aa11.41□□□□□ -0.58
SMARCAL1-213ENST00000496037 RNF166Q96A37 237 aaPredicted RBP11.41□□□□□ -0.58
SMARCAL1-213ENST00000496037 COL26A1Q96A83 441 aa11.41□□□□□ -0.58
SMARCAL1-213ENST00000496037 KATNAL1Q9BW62 490 aa11.41□□□□□ -0.58
SMARCAL1-213ENST00000496037 MKNK2Q9HBH9 465 aa11.41□□□□□ -0.58
SMARCAL1-213ENST00000496037 HDAC6Q9UBN7 1215 aa11.41□□□□□ -0.58
SMARCAL1-213ENST00000496037 CCPG1Q9ULG6 757 aa11.41□□□□□ -0.58
SMARCAL1-213ENST00000496037 VPS9D1Q9Y2B5 631 aa11.41□□□□□ -0.58
SMARCAL1-213ENST00000496037 MYO7AQ13402 2215 aa11.4□□□□□ -0.58
SMARCAL1-213ENST00000496037 ADGRA3Q8IWK6 1321 aa11.4□□□□□ -0.58
SMARCAL1-213ENST00000496037 SURF6O75683 361 aaKnown RBP11.4□□□□□ -0.58
SMARCAL1-213ENST00000496037 MMP3P08254 477 aa11.4□□□□□ -0.58
SMARCAL1-213ENST00000496037 CASTP20810 708 aaKnown RBP11.4□□□□□ -0.58
SMARCAL1-213ENST00000496037 THPOP40225 353 aa11.4□□□□□ -0.58
SMARCAL1-213ENST00000496037 NRIP1P48552 1158 aa11.4□□□□□ -0.58
SMARCAL1-213ENST00000496037 CLCN5P51795 746 aa11.4□□□□□ -0.58
SMARCAL1-213ENST00000496037 TRIM71Q2Q1W2 868 aaKnown RBP11.4□□□□□ -0.58
SMARCAL1-213ENST00000496037 SLFN13Q68D06 897 aa11.4□□□□□ -0.58
SMARCAL1-213ENST00000496037 DHX37Q8IY37 1157 aaKnown RBP11.4□□□□□ -0.58
SMARCAL1-213ENST00000496037 GMCL1P1Q8NEA9 526 aa11.4□□□□□ -0.58
SMARCAL1-213ENST00000496037 AFG1LQ8WV93 481 aa11.4□□□□□ -0.58
SMARCAL1-213ENST00000496037 HAUS7Q99871 368 aa11.4□□□□□ -0.58
SMARCAL1-213ENST00000496037 PLVAPQ9BX97 442 aa11.4□□□□□ -0.58
SMARCAL1-213ENST00000496037 MRS2Q9HD23 443 aa11.4□□□□□ -0.58
SMARCAL1-213ENST00000496037 SYNPO2Q9UMS6 1093 aa11.4□□□□□ -0.58
SMARCAL1-213ENST00000496037 SORCS3Q9UPU3 1222 aa11.4□□□□□ -0.58
SMARCAL1-213ENST00000496037 GREB1LQ9C091 1923 aaPredicted RBP11.39□□□□□ -0.59
SMARCAL1-213ENST00000496037 PTPDC1A2A3K4 754 aa11.39□□□□□ -0.59
SMARCAL1-213ENST00000496037 MAP3K7O43318 606 aa11.39□□□□□ -0.59
SMARCAL1-213ENST00000496037 SP100P23497 879 aaPredicted RBP11.39□□□□□ -0.59
SMARCAL1-213ENST00000496037 BAATQ14032 418 aaPredicted RBP11.39□□□□□ -0.59
SMARCAL1-213ENST00000496037 ANGPT1Q15389 498 aa11.39□□□□□ -0.59
SMARCAL1-213ENST00000496037 ADGRD2Q7Z7M1 963 aa11.39□□□□□ -0.59
SMARCAL1-213ENST00000496037 SUSD6Q92537 303 aa11.39□□□□□ -0.59
SMARCAL1-213ENST00000496037 KAT2BQ92831 832 aa11.39□□□□□ -0.59
SMARCAL1-213ENST00000496037 WNT8BQ93098 351 aa11.39□□□□□ -0.59
SMARCAL1-213ENST00000496037 EAF2Q96CJ1 260 aaPredicted RBP11.39□□□□□ -0.59
SMARCAL1-213ENST00000496037 CHAMP1Q96JM3 812 aa11.39□□□□□ -0.59
SMARCAL1-213ENST00000496037 ALG1Q9BT22 464 aa11.39□□□□□ -0.59
SMARCAL1-213ENST00000496037 ARPP21Q9UBL0 812 aaPredicted RBP11.39□□□□□ -0.59
SMARCAL1-213ENST00000496037 NR2E1Q9Y466 385 aa11.39□□□□□ -0.59
SMARCAL1-213ENST00000496037 EP300Q09472 2414 aaPredicted RBP11.39□□□□□ -0.59
SMARCAL1-213ENST00000496037 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.38□□□□□ -0.59
SMARCAL1-213ENST00000496037 TCRBV5S4A2TA0A5A2 114 aa11.38□□□□□ -0.59
SMARCAL1-213ENST00000496037 FSD2A1L4K1 749 aa11.38□□□□□ -0.59
SMARCAL1-213ENST00000496037 RBAK-RBAKDNI3L0D1 243 aa11.38□□□□□ -0.59
SMARCAL1-213ENST00000496037 HRO43593 1189 aa11.38□□□□□ -0.59
SMARCAL1-213ENST00000496037 BRD1O95696 1058 aa11.38□□□□□ -0.59
SMARCAL1-213ENST00000496037 GLP2RO95838 553 aa11.38□□□□□ -0.59
SMARCAL1-213ENST00000496037 TTLL1O95922 423 aa11.38□□□□□ -0.59
SMARCAL1-213ENST00000496037 SRGAP2BP0DMP2 458 aa11.38□□□□□ -0.59
SMARCAL1-213ENST00000496037 RASA1P20936 1047 aa11.38□□□□□ -0.59
SMARCAL1-213ENST00000496037 BTG3Q14201 252 aaPredicted RBP11.38□□□□□ -0.59
SMARCAL1-213ENST00000496037 DGKDQ16760 1214 aa11.38□□□□□ -0.59
SMARCAL1-213ENST00000496037 RSPO4Q2I0M5 234 aaPredicted RBP11.38□□□□□ -0.59
SMARCAL1-213ENST00000496037 KIAA0319Q5VV43 1072 aa11.38□□□□□ -0.59
SMARCAL1-213ENST00000496037 RBM23Q86U06 439 aaKnown RBP11.38□□□□□ -0.59
SMARCAL1-213ENST00000496037 CYP2W1Q8TAV3 490 aa11.38□□□□□ -0.59
SMARCAL1-213ENST00000496037 STAG1Q8WVM7 1258 aa11.38□□□□□ -0.59
SMARCAL1-213ENST00000496037 CLP1Q92989 425 aaKnown RBP11.38□□□□□ -0.59
SMARCAL1-213ENST00000496037 NEK1Q96PY6 1258 aa11.38□□□□□ -0.59
SMARCAL1-213ENST00000496037 PLAGL2Q9UPG8 496 aa11.38□□□□□ -0.59
SMARCAL1-213ENST00000496037 BAZ2AQ9UIF9 1905 aaKnown RBP11.38□□□□□ -0.59
SMARCAL1-213ENST00000496037 LCTP09848 1927 aa11.37□□□□□ -0.59
SMARCAL1-213ENST00000496037 B4DLN1 442 aa11.37□□□□□ -0.59
SMARCAL1-213ENST00000496037 GH1P01241 217 aa11.37□□□□□ -0.59
SMARCAL1-213ENST00000496037 LINC00271P0C7V0 271 aa11.37□□□□□ -0.59
SMARCAL1-213ENST00000496037 SDHBP21912 280 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms