RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-233ENST00000495899 A0A1W2PPC1 479 aa14.15□□□□□ -0.14
MRPL55-233ENST00000495899 KIAA0355O15063 1070 aa14.15□□□□□ -0.14
MRPL55-233ENST00000495899 TLR3O15455 904 aaKnown RBP14.15□□□□□ -0.14
MRPL55-233ENST00000495899 DEXIO95424 95 aa14.15□□□□□ -0.14
MRPL55-233ENST00000495899 MMP3P08254 477 aa14.15□□□□□ -0.14
MRPL55-233ENST00000495899 MYL3P08590 195 aa14.15□□□□□ -0.14
MRPL55-233ENST00000495899 SP2Q02086 613 aa14.15□□□□□ -0.14
MRPL55-233ENST00000495899 FAAP100Q0VG06 881 aa14.15□□□□□ -0.14
MRPL55-233ENST00000495899 SCRN1Q12765 414 aa14.15□□□□□ -0.14
MRPL55-233ENST00000495899 STK3Q13188 491 aa14.15□□□□□ -0.14
MRPL55-233ENST00000495899 NEDD9Q14511 834 aa14.15□□□□□ -0.14
MRPL55-233ENST00000495899 DGKDQ16760 1214 aa14.15□□□□□ -0.14
MRPL55-233ENST00000495899 IL27Q8NEV9 243 aa14.15□□□□□ -0.14
MRPL55-233ENST00000495899 GPRASP2Q96D09 838 aa14.15□□□□□ -0.14
MRPL55-233ENST00000495899 LBHD1Q9BQE6 289 aaPredicted RBP14.15□□□□□ -0.14
MRPL55-233ENST00000495899 PDLIM7Q9NR12 457 aa14.15□□□□□ -0.14
MRPL55-233ENST00000495899 UBIAD1Q9Y5Z9 338 aa14.15□□□□□ -0.14
MRPL55-233ENST00000495899 GRIN2DO15399 1336 aa14.15□□□□□ -0.15
MRPL55-233ENST00000495899 TRIM43BA6NCK2 446 aa14.14□□□□□ -0.15
MRPL55-233ENST00000495899 GGPS1O95749 300 aa14.14□□□□□ -0.15
MRPL55-233ENST00000495899 HOXD8P13378 290 aaPredicted RBP14.14□□□□□ -0.15
MRPL55-233ENST00000495899 ITGB5P18084 799 aa14.14□□□□□ -0.15
MRPL55-233ENST00000495899 UBA1P22314 1058 aaKnown RBP14.14□□□□□ -0.15
MRPL55-233ENST00000495899 MAGEA10P43363 369 aaPredicted RBP14.14□□□□□ -0.15
MRPL55-233ENST00000495899 RBM25P49756 843 aaKnown RBP14.14□□□□□ -0.15
MRPL55-233ENST00000495899 PTPN11Q06124 597 aaPredicted RBP14.14□□□□□ -0.15
MRPL55-233ENST00000495899 NFRKBQ6P4R8 1299 aa14.14□□□□□ -0.15
MRPL55-233ENST00000495899 FAM126BQ8IXS8 530 aa14.14□□□□□ -0.15
MRPL55-233ENST00000495899 TRIM43Q96BQ3 446 aaPredicted RBP14.14□□□□□ -0.15
MRPL55-233ENST00000495899 SPATA33Q96N06 139 aa14.14□□□□□ -0.15
MRPL55-233ENST00000495899 C22orf23Q9BZE7 217 aa14.14□□□□□ -0.15
MRPL55-233ENST00000495899 MLXIPQ9HAP2 919 aa14.14□□□□□ -0.15
MRPL55-233ENST00000495899 TMEM39AQ9NV64 488 aa14.14□□□□□ -0.15
MRPL55-233ENST00000495899 CD4P01730 458 aa14.13□□□□□ -0.15
MRPL55-233ENST00000495899 SREBF1P36956 1147 aa14.13□□□□□ -0.15
MRPL55-233ENST00000495899 PSMC6P62333 389 aa14.13□□□□□ -0.15
MRPL55-233ENST00000495899 MTMR1Q13613 665 aa14.13□□□□□ -0.15
MRPL55-233ENST00000495899 MFSD10Q14728 455 aa14.13□□□□□ -0.15
MRPL55-233ENST00000495899 GALNT17Q6IS24 598 aa14.13□□□□□ -0.15
MRPL55-233ENST00000495899 METTL7BQ6UX53 244 aa14.13□□□□□ -0.15
MRPL55-233ENST00000495899 SH3RF1Q7Z6J0 888 aa14.13□□□□□ -0.15
MRPL55-233ENST00000495899 REXO1Q8N1G1 1221 aaKnown RBP14.13□□□□□ -0.15
MRPL55-233ENST00000495899 ANO3Q9BYT9 981 aa14.13□□□□□ -0.15
MRPL55-233ENST00000495899 UPF2Q9HAU5 1272 aaKnown RBP14.13□□□□□ -0.15
MRPL55-233ENST00000495899 JADE2Q9NQC1 790 aa14.13□□□□□ -0.15
MRPL55-233ENST00000495899 PRDM5Q9NQX1 630 aaPredicted RBP14.13□□□□□ -0.15
MRPL55-233ENST00000495899 PPFIA3O75145 1194 aa14.12□□□□□ -0.15
MRPL55-233ENST00000495899 CYP3A4P08684 503 aa14.12□□□□□ -0.15
MRPL55-233ENST00000495899 SUPT20HL2P0C7V6 817 aa14.12□□□□□ -0.15
MRPL55-233ENST00000495899 NLRP5P59047 1200 aa14.12□□□□□ -0.15
MRPL55-233ENST00000495899 SEMA3FQ13275 785 aa14.12□□□□□ -0.15
MRPL55-233ENST00000495899 ME3Q16798 604 aa14.12□□□□□ -0.15
MRPL55-233ENST00000495899 NBPF20Q3BBV1 942 aa14.12□□□□□ -0.15
MRPL55-233ENST00000495899 HSDL1Q3SXM5 330 aa14.12□□□□□ -0.15
MRPL55-233ENST00000495899 CEP55Q53EZ4 464 aa14.12□□□□□ -0.15
MRPL55-233ENST00000495899 HABP4Q5JVS0 413 aaKnown RBP14.12□□□□□ -0.15
MRPL55-233ENST00000495899 CRYGNQ8WXF5 182 aa14.12□□□□□ -0.15
MRPL55-233ENST00000495899 DDX27Q96GQ7 796 aaKnown RBP14.12□□□□□ -0.15
MRPL55-233ENST00000495899 KIF2CQ99661 725 aa14.12□□□□□ -0.15
MRPL55-233ENST00000495899 MXRA8Q9BRK3 442 aa14.12□□□□□ -0.15
MRPL55-233ENST00000495899 KATNAL1Q9BW62 490 aa14.12□□□□□ -0.15
MRPL55-233ENST00000495899 TMEM260Q9NX78 707 aa14.12□□□□□ -0.15
MRPL55-233ENST00000495899 VPS54Q9P1Q0 977 aa14.12□□□□□ -0.15
MRPL55-233ENST00000495899 TBX21Q9UL17 535 aa14.12□□□□□ -0.15
MRPL55-233ENST00000495899 STK36Q9NRP7 1315 aa14.12□□□□□ -0.15
MRPL55-233ENST00000495899 ALPK3Q96L96 1907 aa14.11□□□□□ -0.15
MRPL55-233ENST00000495899 MEIS1O00470 390 aa14.11□□□□□ -0.15
MRPL55-233ENST00000495899 NOP56O00567 594 aaKnown RBP14.11□□□□□ -0.15
MRPL55-233ENST00000495899 CEP290O15078 2479 aa14.11□□□□□ -0.15
MRPL55-233ENST00000495899 TIMP1P01033 207 aa14.11□□□□□ -0.15
MRPL55-233ENST00000495899 RAG1P15918 1043 aa14.11□□□□□ -0.15
MRPL55-233ENST00000495899 XBP1P17861 261 aa14.11□□□□□ -0.15
MRPL55-233ENST00000495899 ARHGAP4P98171 946 aa14.11□□□□□ -0.15
MRPL55-233ENST00000495899 JAKMIP3Q5VZ66 844 aa14.11□□□□□ -0.15
MRPL55-233ENST00000495899 CYFIP1Q7L576 1253 aa14.11□□□□□ -0.15
MRPL55-233ENST00000495899 NIPA1Q7RTP0 329 aa14.11□□□□□ -0.15
MRPL55-233ENST00000495899 SESTD1Q86VW0 696 aa14.11□□□□□ -0.15
MRPL55-233ENST00000495899 WASF1Q92558 559 aa14.11□□□□□ -0.15
MRPL55-233ENST00000495899 KAT2BQ92831 832 aa14.11□□□□□ -0.15
MRPL55-233ENST00000495899 GTF3C6Q969F1 213 aa14.11□□□□□ -0.15
MRPL55-233ENST00000495899 UBE2OQ9C0C9 1292 aaKnown RBP14.11□□□□□ -0.15
MRPL55-233ENST00000495899 LIMCH1Q9UPQ0 1083 aa14.11□□□□□ -0.15
MRPL55-233ENST00000495899 HAS3O00219 553 aa14.1□□□□□ -0.15
MRPL55-233ENST00000495899 B4GALT4O60513 344 aa14.1□□□□□ -0.15
MRPL55-233ENST00000495899 F2P00734 622 aa14.1□□□□□ -0.15
MRPL55-233ENST00000495899 KCNA2P16389 499 aa14.1□□□□□ -0.15
MRPL55-233ENST00000495899 ZNF76P36508 570 aa14.1□□□□□ -0.15
MRPL55-233ENST00000495899 MDM2Q00987 491 aaPredicted RBP14.1□□□□□ -0.15
MRPL55-233ENST00000495899 BADQ92934 168 aa14.1□□□□□ -0.15
MRPL55-233ENST00000495899 PGBD1Q96JS3 809 aa14.1□□□□□ -0.15
MRPL55-233ENST00000495899 GPR20Q99678 358 aa14.1□□□□□ -0.15
MRPL55-233ENST00000495899 TRPV6Q9H1D0 765 aa14.1□□□□□ -0.15
MRPL55-233ENST00000495899 BCAS3Q9H6U6 928 aa14.1□□□□□ -0.15
MRPL55-233ENST00000495899 KCNH7Q9NS40 1196 aa14.1□□□□□ -0.15
MRPL55-233ENST00000495899 PCDHA4Q9UN74 947 aa14.1□□□□□ -0.15
MRPL55-233ENST00000495899 ATP9AO75110 1047 aa14.09□□□□□ -0.15
MRPL55-233ENST00000495899 CTDNEP1O95476 244 aa14.09□□□□□ -0.15
MRPL55-233ENST00000495899 ITGB8P26012 769 aa14.09□□□□□ -0.15
MRPL55-233ENST00000495899 USP11P51784 963 aa14.09□□□□□ -0.15
MRPL55-233ENST00000495899 E2F4Q16254 413 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms