RNA–Protein interactions for RNA: ENST00000495893.6

PHC3-215, Transcript of polyhomeotic homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHC3, Length 12,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-215ENST00000495893 MTX1Q13505 466 aa4.11□□□□□ -1.75
PHC3-215ENST00000495893 CASP8Q14790 479 aa4.11□□□□□ -1.75
PHC3-215ENST00000495893 C17orf53Q8N3J3 647 aaPredicted RBP4.11□□□□□ -1.75
PHC3-215ENST00000495893 OR8K1Q8NGG5 319 aa4.11□□□□□ -1.75
PHC3-215ENST00000495893 DHX58Q96C10 678 aa4.11□□□□□ -1.75
PHC3-215ENST00000495893 MCRS1Q96EZ8 462 aa4.11□□□□□ -1.75
PHC3-215ENST00000495893 B3GALT6Q96L58 329 aa4.11□□□□□ -1.75
PHC3-215ENST00000495893 CRNKL1Q9BZJ0 848 aaKnown RBP4.11□□□□□ -1.75
PHC3-215ENST00000495893 KLC2Q9H0B6 622 aa4.11□□□□□ -1.75
PHC3-215ENST00000495893 TRPV6Q9H1D0 765 aa4.11□□□□□ -1.75
PHC3-215ENST00000495893 CCPG1Q9ULG6 757 aa4.11□□□□□ -1.75
PHC3-215ENST00000495893 PITPNM2Q9BZ72 1349 aa4.11□□□□□ -1.75
PHC3-215ENST00000495893 METP08581 1390 aa4.11□□□□□ -1.75
PHC3-215ENST00000495893 ITSN1Q15811 1721 aa4.11□□□□□ -1.75
PHC3-215ENST00000495893 GPC4O75487 556 aa4.11□□□□□ -1.75
PHC3-215ENST00000495893 GSNP06396 782 aa4.11□□□□□ -1.75
PHC3-215ENST00000495893 INHBAP08476 426 aa4.11□□□□□ -1.75
PHC3-215ENST00000495893 CALM1P0DP23 149 aa4.11□□□□□ -1.75
PHC3-215ENST00000495893 CALM2P0DP24 149 aa4.11□□□□□ -1.75
PHC3-215ENST00000495893 CALM3P0DP25 149 aa4.11□□□□□ -1.75
PHC3-215ENST00000495893 SNAP25P60880 206 aa4.11□□□□□ -1.75
PHC3-215ENST00000495893 SPARCL1Q14515 664 aa4.11□□□□□ -1.75
PHC3-215ENST00000495893 Q4G0T1 1027 aa4.11□□□□□ -1.75
PHC3-215ENST00000495893 AKAP4Q5JQC9 854 aa4.11□□□□□ -1.75
PHC3-215ENST00000495893 NIM1KQ8IY84 436 aa4.11□□□□□ -1.75
PHC3-215ENST00000495893 FAM167BQ9BTA0 163 aa4.11□□□□□ -1.75
PHC3-215ENST00000495893 THUMPD2Q9BTF0 503 aaKnown RBP4.11□□□□□ -1.75
PHC3-215ENST00000495893 CAAP1Q9H8G2 361 aa4.11□□□□□ -1.75
PHC3-215ENST00000495893 SSH2Q76I76 1423 aa4.11□□□□□ -1.75
PHC3-215ENST00000495893 NPR1P16066 1061 aa4.11□□□□□ -1.75
PHC3-215ENST00000495893 PAK1Q13153 545 aa4.11□□□□□ -1.75
PHC3-215ENST00000495893 HSP90AA4PQ58FG1 418 aa4.11□□□□□ -1.75
PHC3-215ENST00000495893 LRRC8EQ6NSJ5 796 aa4.11□□□□□ -1.75
PHC3-215ENST00000495893 ZNF804AQ7Z570 1209 aa4.11□□□□□ -1.75
PHC3-215ENST00000495893 LRRC49Q8IUZ0 686 aa4.11□□□□□ -1.75
PHC3-215ENST00000495893 ZSCAN29Q8IWY8 852 aaPredicted RBP4.11□□□□□ -1.75
PHC3-215ENST00000495893 PBKQ96KB5 322 aa4.11□□□□□ -1.75
PHC3-215ENST00000495893 PARP1P09874 1014 aaKnown RBP4.11□□□□□ -1.75
PHC3-215ENST00000495893 HLA-DPA1P20036 260 aa4.11□□□□□ -1.75
PHC3-215ENST00000495893 CTCFP49711 727 aaPredicted RBP4.11□□□□□ -1.75
PHC3-215ENST00000495893 ARPC4P59998 168 aa4.11□□□□□ -1.75
PHC3-215ENST00000495893 TTLL7Q6ZT98 887 aa4.11□□□□□ -1.75
PHC3-215ENST00000495893 ZGPATQ8N5A5 531 aaKnown RBP4.11□□□□□ -1.75
PHC3-215ENST00000495893 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.11□□□□□ -1.758e-7■■■□□ 16.9
PHC3-215ENST00000495893 CARD9Q9H257 536 aa4.11□□□□□ -1.75
PHC3-215ENST00000495893 KCNQ2O43526 872 aa4.11□□□□□ -1.75
PHC3-215ENST00000495893 SUPT3HO75486 399 aa4.11□□□□□ -1.75
PHC3-215ENST00000495893 ACTN3Q08043 901 aaPredicted RBP4.11□□□□□ -1.75
PHC3-215ENST00000495893 TRIM71Q2Q1W2 868 aaKnown RBP4.11□□□□□ -1.75
PHC3-215ENST00000495893 C10orf76Q5T2E6 689 aa4.11□□□□□ -1.75
PHC3-215ENST00000495893 RCSD1Q6JBY9 416 aa4.11□□□□□ -1.75
PHC3-215ENST00000495893 RTKN2Q8IZC4 609 aa4.11□□□□□ -1.75
PHC3-215ENST00000495893 AGGF1Q8N302 714 aaeCLIP4.11□□□□□ -1.75
PHC3-215ENST00000495893 TRIM45Q9H8W5 580 aaPredicted RBP4.11□□□□□ -1.75
PHC3-215ENST00000495893 ANKIB1Q9P2G1 1089 aa4.11□□□□□ -1.75
PHC3-215ENST00000495893 KIAA0232Q92628 1395 aa4.11□□□□□ -1.75
PHC3-215ENST00000495893 ROBO2Q9HCK4 1378 aa4.11□□□□□ -1.75
PHC3-215ENST00000495893 MAGEA13PA6NCF6 341 aa4.11□□□□□ -1.75
PHC3-215ENST00000495893 IPO5O00410 1097 aaKnown RBP4.11□□□□□ -1.75
PHC3-215ENST00000495893 GABPAQ06546 454 aa4.11□□□□□ -1.75
PHC3-215ENST00000495893 WASHC5Q12768 1159 aa4.11□□□□□ -1.75
PHC3-215ENST00000495893 RASSF3Q86WH2 238 aa4.11□□□□□ -1.75
PHC3-215ENST00000495893 TMEM87AQ8NBN3 555 aa4.11□□□□□ -1.75
PHC3-215ENST00000495893 TEKT4Q8WW24 435 aa4.11□□□□□ -1.75
PHC3-215ENST00000495893 NAF1Q96HR8 494 aaKnown RBP4.11□□□□□ -1.75
PHC3-215ENST00000495893 CSRNP1Q96S65 589 aa4.11□□□□□ -1.75
PHC3-215ENST00000495893 BABAM1Q9NWV8 329 aa4.11□□□□□ -1.75
PHC3-215ENST00000495893 HPS5Q9UPZ3 1129 aa4.11□□□□□ -1.75
PHC3-215ENST00000495893 CARD8Q9Y2G2 431 aa4.11□□□□□ -1.75
PHC3-215ENST00000495893 CCDC144BQ3MJ40 725 aa4.1□□□□□ -1.75
PHC3-215ENST00000495893 DTHD1Q6ZMT9 781 aa4.1□□□□□ -1.75
PHC3-215ENST00000495893 ZNF444Q8N0Y2 327 aaPredicted RBP4.1□□□□□ -1.75
PHC3-215ENST00000495893 CLEC4MQ9H2X3 399 aaPredicted RBP4.1□□□□□ -1.75
PHC3-215ENST00000495893 PAPOLBQ9NRJ5 636 aaKnown RBP4.1□□□□□ -1.75
PHC3-215ENST00000495893 MRGBPQ9NV56 204 aa4.1□□□□□ -1.75
PHC3-215ENST00000495893 ZFP69BQ9UJL9 534 aa4.1□□□□□ -1.75
PHC3-215ENST00000495893 RNASE9P60153 205 aaKnown RBP4.1□□□□□ -1.75
PHC3-215ENST00000495893 WTAPQ15007 396 aa4.1□□□□□ -1.75
PHC3-215ENST00000495893 TUBA3EQ6PEY2 450 aa4.1□□□□□ -1.75
PHC3-215ENST00000495893 MRRFQ96E11 262 aaKnown RBP4.1□□□□□ -1.75
PHC3-215ENST00000495893 SUCLA2Q9P2R7 463 aaPredicted RBP4.1□□□□□ -1.75
PHC3-215ENST00000495893 AHDC1Q5TGY3 1603 aaPredicted RBP4.1□□□□□ -1.75
PHC3-215ENST00000495893 ADCY8P40145 1251 aa4.1□□□□□ -1.75
PHC3-215ENST00000495893 IL1RL1Q01638 556 aa4.1□□□□□ -1.75
PHC3-215ENST00000495893 GUCY2DQ02846 1103 aa4.1□□□□□ -1.75
PHC3-215ENST00000495893 ARMC3Q5W041 872 aa4.1□□□□□ -1.75
PHC3-215ENST00000495893 NAIF1Q69YI7 327 aaPredicted RBP4.1□□□□□ -1.75
PHC3-215ENST00000495893 IKBIPQ70UQ0 350 aa4.1□□□□□ -1.75
PHC3-215ENST00000495893 CYTH2Q99418 400 aa4.1□□□□□ -1.75
PHC3-215ENST00000495893 CLTCL1P53675 1640 aa4.1□□□□□ -1.75
PHC3-215ENST00000495893 TCHHQ07283 1943 aa4.1□□□□□ -1.75
PHC3-215ENST00000495893 NCAPD2Q15021 1401 aa4.1□□□□□ -1.75
PHC3-215ENST00000495893 CPDO75976 1380 aa4.1□□□□□ -1.75
PHC3-215ENST00000495893 LRRIQ1Q96JM4 1722 aa4.1□□□□□ -1.75
PHC3-215ENST00000495893 NVLO15381 856 aaKnown RBP4.1□□□□□ -1.75
PHC3-215ENST00000495893 NUP62P37198 522 aaPredicted RBP4.1□□□□□ -1.75
PHC3-215ENST00000495893 IL12RB1P42701 662 aa4.1□□□□□ -1.75
PHC3-215ENST00000495893 C8orf34Q49A92 452 aa4.1□□□□□ -1.75
PHC3-215ENST00000495893 ZC3H12BQ5HYM0 836 aaKnown RBP4.1□□□□□ -1.75
PHC3-215ENST00000495893 KCTD16Q68DU8 428 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms