RNA–Protein interactions for RNA: ENST00000495749.1

TM9SF4-207, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2

Gene TM9SF4, Length 3,023 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-207ENST00000495749 SFI1A8K8P3 1242 aa10.08□□□□□ -0.8
TM9SF4-207ENST00000495749 ZNF76P36508 570 aa10.08□□□□□ -0.8
TM9SF4-207ENST00000495749 SLC20A2Q08357 652 aa10.08□□□□□ -0.8
TM9SF4-207ENST00000495749 TMEM266Q2M3C6 531 aa10.08□□□□□ -0.8
TM9SF4-207ENST00000495749 PAPD7Q5XG87 772 aaKnown RBP10.08□□□□□ -0.8
TM9SF4-207ENST00000495749 GALNT17Q6IS24 598 aa10.08□□□□□ -0.8
TM9SF4-207ENST00000495749 TTI2Q6NXR4 508 aa10.08□□□□□ -0.8
TM9SF4-207ENST00000495749 CPXCR1Q8N123 301 aa10.08□□□□□ -0.8
TM9SF4-207ENST00000495749 THAP9Q9H5L6 903 aa10.08□□□□□ -0.8
TM9SF4-207ENST00000495749 NHEJ1Q9H9Q4 299 aaPredicted RBP10.08□□□□□ -0.8
TM9SF4-207ENST00000495749 BLOC1S4Q9NUP1 217 aa10.08□□□□□ -0.8
TM9SF4-207ENST00000495749 LY75O60449 1722 aa10.08□□□□□ -0.8
TM9SF4-207ENST00000495749 POTEFA5A3E0 1075 aa10.07□□□□□ -0.8
TM9SF4-207ENST00000495749 ANKRD65E5RJM6 399 aa10.07□□□□□ -0.8
TM9SF4-207ENST00000495749 PDE2AO00408 941 aaPredicted RBP10.07□□□□□ -0.8
TM9SF4-207ENST00000495749 SYF2O95926 243 aaKnown RBP10.07□□□□□ -0.8
TM9SF4-207ENST00000495749 KRT18P05783 430 aaKnown RBP10.07□□□□□ -0.8
TM9SF4-207ENST00000495749 POTEIP0CG38 1075 aa10.07□□□□□ -0.8
TM9SF4-207ENST00000495749 MYBL2P10244 700 aa10.07□□□□□ -0.8
TM9SF4-207ENST00000495749 CYLC1P35663 651 aaPredicted RBP10.07□□□□□ -0.8
TM9SF4-207ENST00000495749 POTEGQ6S5H5 508 aa10.07□□□□□ -0.8
TM9SF4-207ENST00000495749 POTEEQ6S8J3 1075 aa10.07□□□□□ -0.8
TM9SF4-207ENST00000495749 GIMAP8Q8ND71 665 aaPredicted RBP10.07□□□□□ -0.8
TM9SF4-207ENST00000495749 LARP4BQ92615 738 aaKnown RBP10.07□□□□□ -0.8
TM9SF4-207ENST00000495749 DDX12PQ92771 950 aa10.07□□□□□ -0.8
TM9SF4-207ENST00000495749 SH2D3AQ9BRG2 576 aa10.07□□□□□ -0.8
TM9SF4-207ENST00000495749 TANGO6Q9C0B7 1094 aa10.07□□□□□ -0.8
TM9SF4-207ENST00000495749 CCSER1Q9C0I3 900 aa10.07□□□□□ -0.8
TM9SF4-207ENST00000495749 TMOD2Q9NZR1 351 aa10.07□□□□□ -0.8
TM9SF4-207ENST00000495749 DDX39AO00148 427 aaKnown RBP10.07□□□□□ -0.8
TM9SF4-207ENST00000495749 ZBTB39O15060 712 aa10.07□□□□□ -0.8
TM9SF4-207ENST00000495749 RHOBTB3O94955 611 aa10.07□□□□□ -0.8
TM9SF4-207ENST00000495749 SNHG28P0DPA3 235 aa10.07□□□□□ -0.8
TM9SF4-207ENST00000495749 PSMC6P62333 389 aa10.07□□□□□ -0.8
TM9SF4-207ENST00000495749 PABPC4Q13310 644 aaKnown RBP eCLIP10.07□□□□□ -0.8
TM9SF4-207ENST00000495749 SF3B2Q13435 895 aaKnown RBP10.07□□□□□ -0.8
TM9SF4-207ENST00000495749 PRKG1Q13976 671 aa10.07□□□□□ -0.8
TM9SF4-207ENST00000495749 MAP9Q49MG5 647 aa10.07□□□□□ -0.8
TM9SF4-207ENST00000495749 GPATCH4Q5T3I0 446 aaKnown RBP10.07□□□□□ -0.8
TM9SF4-207ENST00000495749 CC2D2BQ6DHV5 1058 aa10.07□□□□□ -0.8
TM9SF4-207ENST00000495749 LRRC31Q6UY01 552 aa10.07□□□□□ -0.8
TM9SF4-207ENST00000495749 KRT26Q7Z3Y9 468 aa10.07□□□□□ -0.8
TM9SF4-207ENST00000495749 KIAA0895Q8NCT3 520 aa10.07□□□□□ -0.8
TM9SF4-207ENST00000495749 C7orf43Q8WVR3 580 aa10.07□□□□□ -0.8
TM9SF4-207ENST00000495749 CAMKK2Q96RR4 588 aa10.07□□□□□ -0.8
TM9SF4-207ENST00000495749 DUSP9Q99956 384 aaKnown RBP10.07□□□□□ -0.8
TM9SF4-207ENST00000495749 ANO3Q9BYT9 981 aa10.07□□□□□ -0.8
TM9SF4-207ENST00000495749 RIC8AQ9NPQ8 531 aa10.07□□□□□ -0.8
TM9SF4-207ENST00000495749 BMP2KQ9NSY1 1161 aaPredicted RBP10.07□□□□□ -0.8
TM9SF4-207ENST00000495749 HPCAL4Q9UM19 191 aa10.07□□□□□ -0.8
TM9SF4-207ENST00000495749 SUGT1Q9Y2Z0 365 aa10.07□□□□□ -0.8
TM9SF4-207ENST00000495749 GJA3Q9Y6H8 435 aa10.07□□□□□ -0.8
TM9SF4-207ENST00000495749 ASTN2O75129 1339 aaPredicted RBP10.07□□□□□ -0.8
TM9SF4-207ENST00000495749 KIAA1551Q9HCM1 1747 aa10.07□□□□□ -0.8
TM9SF4-207ENST00000495749 RASSF10A6NK89 507 aa10.07□□□□□ -0.8
TM9SF4-207ENST00000495749 APBA1Q02410 837 aa10.07□□□□□ -0.8
TM9SF4-207ENST00000495749 KCNB1Q14721 858 aa10.07□□□□□ -0.8
TM9SF4-207ENST00000495749 MEA1Q16626 185 aa10.07□□□□□ -0.8
TM9SF4-207ENST00000495749 EHBP1Q8NDI1 1231 aa10.07□□□□□ -0.8
TM9SF4-207ENST00000495749 SMCR8Q8TEV9 937 aaPredicted RBP10.07□□□□□ -0.8
TM9SF4-207ENST00000495749 COG1Q8WTW3 980 aa10.07□□□□□ -0.8
TM9SF4-207ENST00000495749 CCDC17Q96LX7 622 aa10.07□□□□□ -0.8
TM9SF4-207ENST00000495749 DRC1Q96MC2 740 aa10.07□□□□□ -0.8
TM9SF4-207ENST00000495749 MTMR9Q96QG7 549 aa10.07□□□□□ -0.8
TM9SF4-207ENST00000495749 CRACR2AQ9BSW2 395 aa10.07□□□□□ -0.8
TM9SF4-207ENST00000495749 FAM207AQ9NSI2 230 aaPredicted RBP10.07□□□□□ -0.8
TM9SF4-207ENST00000495749 MYH10P35580 1976 aa10.07□□□□□ -0.8
TM9SF4-207ENST00000495749 BMP3P12645 472 aa10.06□□□□□ -0.8
TM9SF4-207ENST00000495749 MCM3P25205 808 aa10.06□□□□□ -0.8
TM9SF4-207ENST00000495749 MRPS25P82663 173 aaKnown RBP10.06□□□□□ -0.8
TM9SF4-207ENST00000495749 CKAP4Q07065 602 aaKnown RBP10.06□□□□□ -0.8
TM9SF4-207ENST00000495749 C2orf54Q08AI8 447 aa10.06□□□□□ -0.8
TM9SF4-207ENST00000495749 TBC1D10BQ4KMP7 808 aaPredicted RBP10.06□□□□□ -0.8
TM9SF4-207ENST00000495749 STYK1Q6J9G0 422 aa10.06□□□□□ -0.8
TM9SF4-207ENST00000495749 MAEAQ7L5Y9 396 aa10.06□□□□□ -0.8
TM9SF4-207ENST00000495749 FBXO11Q86XK2 927 aa10.06□□□□□ -0.8
TM9SF4-207ENST00000495749 AFAP1L1Q8TED9 768 aa10.06□□□□□ -0.8
TM9SF4-207ENST00000495749 CNOT6LQ96LI5 555 aaKnown RBP10.06□□□□□ -0.8
TM9SF4-207ENST00000495749 NOC4LQ9BVI4 516 aaKnown RBP10.06□□□□□ -0.8
TM9SF4-207ENST00000495749 TTYH3Q9C0H2 523 aa10.06□□□□□ -0.8
TM9SF4-207ENST00000495749 IKZF4Q9H2S9 585 aa10.06□□□□□ -0.8
TM9SF4-207ENST00000495749 DHX36Q9H2U1 1008 aaKnown RBP10.06□□□□□ -0.8
TM9SF4-207ENST00000495749 VIPAS39Q9H9C1 493 aa10.06□□□□□ -0.8
TM9SF4-207ENST00000495749 RGL1Q9NZL6 768 aa10.06□□□□□ -0.8
TM9SF4-207ENST00000495749 ADAMTSL1Q8N6G6 1762 aa10.06□□□□□ -0.8
TM9SF4-207ENST00000495749 SPDYE3A6NKU9 549 aa10.06□□□□□ -0.8
TM9SF4-207ENST00000495749 PLEKP08567 350 aaPredicted RBP10.06□□□□□ -0.8
TM9SF4-207ENST00000495749 GGCXP38435 758 aa10.06□□□□□ -0.8
TM9SF4-207ENST00000495749 ZBED6P86452 979 aa10.06□□□□□ -0.8
TM9SF4-207ENST00000495749 KIF5AQ12840 1032 aa10.06□□□□□ -0.8
TM9SF4-207ENST00000495749 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.06□□□□□ -0.8
TM9SF4-207ENST00000495749 P2RX5Q93086 422 aa10.06□□□□□ -0.8
TM9SF4-207ENST00000495749 SEMA6BQ9H3T3 888 aa10.06□□□□□ -0.8
TM9SF4-207ENST00000495749 ZNF70Q9UC06 446 aaPredicted RBP10.06□□□□□ -0.8
TM9SF4-207ENST00000495749 DDX60LQ5H9U9 1706 aaKnown RBP10.05□□□□□ -0.8
TM9SF4-207ENST00000495749 FAM86B1E9PN63 330 aa10.05□□□□□ -0.8
TM9SF4-207ENST00000495749 MEIS2O14770 477 aa10.05□□□□□ -0.8
TM9SF4-207ENST00000495749 PRPF6O94906 941 aaKnown RBP10.05□□□□□ -0.8
TM9SF4-207ENST00000495749 FAM86B2P0C5J1 330 aa10.05□□□□□ -0.8
TM9SF4-207ENST00000495749 AARSP49588 968 aaKnown RBP eCLIP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms