RNA–Protein interactions for RNA: ENST00000495693.1

EPHA4-213, Transcript of EPH receptor A4, humanhuman

TSL 3

Gene EPHA4, Length 588 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-213ENST00000495693 RBM5P52756 815 aaKnown RBP eCLIP9.69□□□□□ -0.86
EPHA4-213ENST00000495693 FANCCQ00597 558 aa9.69□□□□□ -0.86
EPHA4-213ENST00000495693 INSM1Q01101 510 aaPredicted RBP9.69□□□□□ -0.86
EPHA4-213ENST00000495693 ZNF543Q08ER8 600 aa9.69□□□□□ -0.86
EPHA4-213ENST00000495693 KCNB1Q14721 858 aa9.69□□□□□ -0.86
EPHA4-213ENST00000495693 DBN1Q16643 649 aa9.69□□□□□ -0.86
EPHA4-213ENST00000495693 CERKLQ49MI3 558 aaPredicted RBP9.69□□□□□ -0.86
EPHA4-213ENST00000495693 APOBEC3HQ6NTF7 200 aaKnown RBP9.69□□□□□ -0.86
EPHA4-213ENST00000495693 FCHSD1Q86WN1 690 aa9.69□□□□□ -0.86
EPHA4-213ENST00000495693 STAG2Q8N3U4 1231 aa9.69□□□□□ -0.86
EPHA4-213ENST00000495693 CERS5Q8N5B7 392 aa9.69□□□□□ -0.86
EPHA4-213ENST00000495693 SLC44A5Q8NCS7 719 aa9.69□□□□□ -0.86
EPHA4-213ENST00000495693 NOC3LQ8WTT2 800 aaKnown RBP9.69□□□□□ -0.86
EPHA4-213ENST00000495693 CUL5Q93034 780 aa9.69□□□□□ -0.86
EPHA4-213ENST00000495693 CALML4Q96GE6 196 aa9.69□□□□□ -0.86
EPHA4-213ENST00000495693 PAGE5Q96GU1 130 aa9.69□□□□□ -0.86
EPHA4-213ENST00000495693 GAS2L1Q99501 681 aaPredicted RBP9.69□□□□□ -0.86
EPHA4-213ENST00000495693 CRISPLD1Q9H336 500 aa9.69□□□□□ -0.86
EPHA4-213ENST00000495693 SH2D4AQ9H788 454 aa9.69□□□□□ -0.86
EPHA4-213ENST00000495693 DISC1Q9NRI5 854 aa9.69□□□□□ -0.86
EPHA4-213ENST00000495693 ZDHHC3Q9NYG2 299 aa9.69□□□□□ -0.86
EPHA4-213ENST00000495693 USP3Q9Y6I4 520 aa9.69□□□□□ -0.86
EPHA4-213ENST00000495693 SYNRGQ9UMZ2 1314 aa9.68□□□□□ -0.86
EPHA4-213ENST00000495693 CDC14CA4D256 554 aa9.68□□□□□ -0.86
EPHA4-213ENST00000495693 USP17L15C9J2P7 530 aa9.68□□□□□ -0.86
EPHA4-213ENST00000495693 USP17L10C9JJH3 530 aa9.68□□□□□ -0.86
EPHA4-213ENST00000495693 USP17L13C9JLJ4 530 aa9.68□□□□□ -0.86
EPHA4-213ENST00000495693 USP17L11C9JVI0 530 aa9.68□□□□□ -0.86
EPHA4-213ENST00000495693 USP17L18D6R9N7 530 aa9.68□□□□□ -0.86
EPHA4-213ENST00000495693 USP17L22D6RA61 530 aa9.68□□□□□ -0.86
EPHA4-213ENST00000495693 USP17L17D6RBQ6 530 aa9.68□□□□□ -0.86
EPHA4-213ENST00000495693 USP17L19D6RCP7 530 aa9.68□□□□□ -0.86
EPHA4-213ENST00000495693 USP17L20D6RJB6 530 aa9.68□□□□□ -0.86
EPHA4-213ENST00000495693 SMIM22K7EJ46 135 aa9.68□□□□□ -0.86
EPHA4-213ENST00000495693 MPHOSPH10O00566 681 aaKnown RBP9.68□□□□□ -0.86
EPHA4-213ENST00000495693 PPIP5K2O43314 1243 aa9.68□□□□□ -0.86
EPHA4-213ENST00000495693 CYTH3O43739 400 aa9.68□□□□□ -0.86
EPHA4-213ENST00000495693 SEC13P55735 322 aa9.68□□□□□ -0.86
EPHA4-213ENST00000495693 USP17L24Q0WX57 530 aa9.68□□□□□ -0.86
EPHA4-213ENST00000495693 DPYDQ12882 1025 aa9.68□□□□□ -0.86
EPHA4-213ENST00000495693 AP3B2Q13367 1082 aa9.68□□□□□ -0.86
EPHA4-213ENST00000495693 TRIM14Q14142 442 aa9.68□□□□□ -0.86
EPHA4-213ENST00000495693 NCAPHQ15003 741 aa9.68□□□□□ -0.86
EPHA4-213ENST00000495693 TEAD4Q15561 434 aa9.68□□□□□ -0.86
EPHA4-213ENST00000495693 TPD52L1Q16890 204 aaPredicted RBP9.68□□□□□ -0.86
EPHA4-213ENST00000495693 SLC4A8Q2Y0W8 1093 aa9.68□□□□□ -0.86
EPHA4-213ENST00000495693 FKBP1CQ5VVH2 108 aa9.68□□□□□ -0.86
EPHA4-213ENST00000495693 SPATA1Q5VX52 437 aa9.68□□□□□ -0.86
EPHA4-213ENST00000495693 RRAGBQ5VZM2 374 aa9.68□□□□□ -0.86
EPHA4-213ENST00000495693 POTEAQ6S8J7 498 aa9.68□□□□□ -0.86
EPHA4-213ENST00000495693 ZSCAN29Q8IWY8 852 aaPredicted RBP9.68□□□□□ -0.86
EPHA4-213ENST00000495693 KCTD17Q8N5Z5 321 aa9.68□□□□□ -0.86
EPHA4-213ENST00000495693 PDILTQ8N807 584 aa9.68□□□□□ -0.86
EPHA4-213ENST00000495693 TTLL6Q8N841 843 aa9.68□□□□□ -0.86
EPHA4-213ENST00000495693 GMCL1P1Q8NEA9 526 aa9.68□□□□□ -0.86
EPHA4-213ENST00000495693 CAMKK2Q96RR4 588 aa9.68□□□□□ -0.86
EPHA4-213ENST00000495693 XPO4Q9C0E2 1151 aaKnown RBP9.68□□□□□ -0.86
EPHA4-213ENST00000495693 DBNDD1Q9H9R9 158 aa9.68□□□□□ -0.86
EPHA4-213ENST00000495693 RIC8AQ9NPQ8 531 aa9.68□□□□□ -0.86
EPHA4-213ENST00000495693 IFNKQ9P0W0 207 aa9.68□□□□□ -0.86
EPHA4-213ENST00000495693 STK17AQ9UEE5 414 aa9.68□□□□□ -0.86
EPHA4-213ENST00000495693 GREB1LQ9C091 1923 aaPredicted RBP9.68□□□□□ -0.86
EPHA4-213ENST00000495693 KDM3AQ9Y4C1 1321 aa9.67□□□□□ -0.86
EPHA4-213ENST00000495693 hCG_1642624A0A1W2PR95 340 aa9.67□□□□□ -0.86
EPHA4-213ENST00000495693 BICDL2A1A5D9 508 aa9.67□□□□□ -0.86
EPHA4-213ENST00000495693 DYNC1I1O14576 645 aa9.67□□□□□ -0.86
EPHA4-213ENST00000495693 ZBTB5O15062 677 aa9.67□□□□□ -0.86
EPHA4-213ENST00000495693 SKILP12757 684 aa9.67□□□□□ -0.86
EPHA4-213ENST00000495693 AKR1B1P15121 316 aa9.67□□□□□ -0.86
EPHA4-213ENST00000495693 MSX1P28360 303 aa9.67□□□□□ -0.86
EPHA4-213ENST00000495693 SHMT1P34896 483 aa9.67□□□□□ -0.86
EPHA4-213ENST00000495693 SLC1A4P43007 532 aa9.67□□□□□ -0.86
EPHA4-213ENST00000495693 PLA2G4AP47712 749 aa9.67□□□□□ -0.86
EPHA4-213ENST00000495693 PDIA5Q14554 519 aa9.67□□□□□ -0.86
EPHA4-213ENST00000495693 INF2Q27J81 1249 aa9.67□□□□□ -0.86
EPHA4-213ENST00000495693 CCDC96Q2M329 555 aa9.67□□□□□ -0.86
EPHA4-213ENST00000495693 EARS2Q5JPH6 523 aaKnown RBP9.67□□□□□ -0.86
EPHA4-213ENST00000495693 ZNF658Q5TYW1 1059 aaPredicted RBP9.67□□□□□ -0.86
EPHA4-213ENST00000495693 PPP4R3AQ6IN85 833 aa9.67□□□□□ -0.86
EPHA4-213ENST00000495693 TATDN1Q6P1N9 297 aa9.67□□□□□ -0.86
EPHA4-213ENST00000495693 MOXD1Q6UVY6 613 aa9.67□□□□□ -0.86
EPHA4-213ENST00000495693 RIPOR1Q6ZS17 1223 aa9.67□□□□□ -0.86
EPHA4-213ENST00000495693 FILIP1Q7Z7B0 1213 aa9.67□□□□□ -0.86
EPHA4-213ENST00000495693 HOMER1Q86YM7 354 aa9.67□□□□□ -0.86
EPHA4-213ENST00000495693 FAM114A1Q8IWE2 563 aa9.67□□□□□ -0.86
EPHA4-213ENST00000495693 TNS4Q8IZW8 715 aa9.67□□□□□ -0.86
EPHA4-213ENST00000495693 IQCDQ96DY2 449 aa9.67□□□□□ -0.86
EPHA4-213ENST00000495693 MAP7D2Q96T17 732 aa9.67□□□□□ -0.86
EPHA4-213ENST00000495693 NAA15Q9BXJ9 866 aaKnown RBP9.67□□□□□ -0.86
EPHA4-213ENST00000495693 GINM1Q9NU53 330 aa9.67□□□□□ -0.86
EPHA4-213ENST00000495693 RWDD2AQ9UIY3 292 aa9.67□□□□□ -0.86
EPHA4-213ENST00000495693 NFE2L3Q9Y4A8 694 aa9.67□□□□□ -0.86
EPHA4-213ENST00000495693 PSME4Q14997 1843 aa9.66□□□□□ -0.86
EPHA4-213ENST00000495693 PSMA7O14818 248 aa9.66□□□□□ -0.86
EPHA4-213ENST00000495693 ZSCAN12O43309 604 aa9.66□□□□□ -0.86
EPHA4-213ENST00000495693 CCNT1O60563 726 aaKnown RBP9.66□□□□□ -0.86
EPHA4-213ENST00000495693 FGFR1OPO95684 399 aaKnown RBP9.66□□□□□ -0.86
EPHA4-213ENST00000495693 FOSP01100 380 aaPredicted RBP9.66□□□□□ -0.86
EPHA4-213ENST00000495693 ATP4AP20648 1035 aa9.66□□□□□ -0.86
EPHA4-213ENST00000495693 ICA1Q05084 483 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms