RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 TDP2O95551 362 aa11.49□□□□□ -0.57
HDAC3-214ENST00000495485 RPN1P04843 607 aaKnown RBP11.49□□□□□ -0.57
HDAC3-214ENST00000495485 ZNF75DP51815 510 aa11.49□□□□□ -0.57
HDAC3-214ENST00000495485 SETQ01105 290 aaPredicted RBP11.49□□□□□ -0.57
HDAC3-214ENST00000495485 PWP2Q15269 919 aaKnown RBP11.49□□□□□ -0.57
HDAC3-214ENST00000495485 TPD52L1Q16890 204 aaPredicted RBP11.49□□□□□ -0.57
HDAC3-214ENST00000495485 PDXDC2PQ6P474 469 aa11.49□□□□□ -0.57
HDAC3-214ENST00000495485 SAMD1Q6SPF0 538 aaPredicted RBP11.49□□□□□ -0.57
HDAC3-214ENST00000495485 OTOP1Q7RTM1 612 aa11.49□□□□□ -0.57
HDAC3-214ENST00000495485 PLEKHH3Q7Z736 793 aa11.49□□□□□ -0.57
HDAC3-214ENST00000495485 ZSCAN30Q86W11 494 aa11.49□□□□□ -0.57
HDAC3-214ENST00000495485 DHX40Q8IX18 779 aaKnown RBP11.49□□□□□ -0.57
HDAC3-214ENST00000495485 ANKRD20A12PQ8NF67 263 aa11.49□□□□□ -0.57
HDAC3-214ENST00000495485 CD99L2Q8TCZ2 262 aa11.49□□□□□ -0.57
HDAC3-214ENST00000495485 PXYLP1Q8TE99 480 aa11.49□□□□□ -0.57
HDAC3-214ENST00000495485 ERCC4Q92889 916 aaPredicted RBP11.49□□□□□ -0.57
HDAC3-214ENST00000495485 NUDT12Q9BQG2 462 aa11.49□□□□□ -0.57
HDAC3-214ENST00000495485 TSKSQ9UJT2 592 aa11.49□□□□□ -0.57
HDAC3-214ENST00000495485 PLXNA1Q9UIW2 1896 aa11.49□□□□□ -0.57
HDAC3-214ENST00000495485 A0A087X0B3 334 aa11.48□□□□□ -0.57
HDAC3-214ENST00000495485 ESPNB1AK53 854 aa11.48□□□□□ -0.57
HDAC3-214ENST00000495485 CNMDO75829 334 aa11.48□□□□□ -0.57
HDAC3-214ENST00000495485 HOXC6P09630 235 aa11.48□□□□□ -0.57
HDAC3-214ENST00000495485 FCER1AP12319 257 aa11.48□□□□□ -0.57
HDAC3-214ENST00000495485 CDK11BP21127 795 aaKnown RBP11.48□□□□□ -0.57
HDAC3-214ENST00000495485 SNAP25P60880 206 aa11.48□□□□□ -0.57
HDAC3-214ENST00000495485 TMEM132BQ14DG7 1078 aa11.48□□□□□ -0.57
HDAC3-214ENST00000495485 ZNF658Q5TYW1 1059 aaPredicted RBP11.48□□□□□ -0.57
HDAC3-214ENST00000495485 ISM2Q6H9L7 571 aa11.48□□□□□ -0.57
HDAC3-214ENST00000495485 FCHSD1Q86WN1 690 aa11.48□□□□□ -0.57
HDAC3-214ENST00000495485 PLA2G4DQ86XP0 818 aa11.48□□□□□ -0.57
HDAC3-214ENST00000495485 MSL3Q8N5Y2 521 aaKnown RBP11.48□□□□□ -0.57
HDAC3-214ENST00000495485 SLAIN1Q8ND83 568 aa11.48□□□□□ -0.57
HDAC3-214ENST00000495485 SNX29Q8TEQ0 813 aa11.48□□□□□ -0.57
HDAC3-214ENST00000495485 TRIM47Q96LD4 638 aa11.48□□□□□ -0.57
HDAC3-214ENST00000495485 CTAGE1Q96RT6 745 aa11.48□□□□□ -0.57
HDAC3-214ENST00000495485 C7orf25Q9BPX7 421 aa11.48□□□□□ -0.57
HDAC3-214ENST00000495485 MOV10L1Q9BXT6 1211 aaKnown RBP11.48□□□□□ -0.57
HDAC3-214ENST00000495485 TXNRD2Q9NNW7 524 aa11.48□□□□□ -0.57
HDAC3-214ENST00000495485 FBXO28Q9NVF7 368 aa11.48□□□□□ -0.57
HDAC3-214ENST00000495485 KBTBD4Q9NVX7 518 aa11.48□□□□□ -0.57
HDAC3-214ENST00000495485 BTBD7Q9P203 1132 aa11.48□□□□□ -0.57
HDAC3-214ENST00000495485 DIS3Q9Y2L1 958 aaKnown RBP11.48□□□□□ -0.57
HDAC3-214ENST00000495485 TRIM17Q9Y577 477 aa11.48□□□□□ -0.57
HDAC3-214ENST00000495485 PFASO15067 1338 aa11.48□□□□□ -0.57
HDAC3-214ENST00000495485 SMCHD1A6NHR9 2005 aa11.48□□□□□ -0.57
HDAC3-214ENST00000495485 PVALEFA0A1B0GWK0 134 aa11.47□□□□□ -0.57
HDAC3-214ENST00000495485 SLC37A4O43826 429 aa11.47□□□□□ -0.57
HDAC3-214ENST00000495485 KIF20AO95235 890 aa11.47□□□□□ -0.57
HDAC3-214ENST00000495485 SERPINC1P01008 464 aa11.47□□□□□ -0.57
HDAC3-214ENST00000495485 PRR29P0C7W0 189 aa11.47□□□□□ -0.57
HDAC3-214ENST00000495485 PLCG1P19174 1290 aa11.47□□□□□ -0.57
HDAC3-214ENST00000495485 ERCC3P19447 782 aa11.47□□□□□ -0.57
HDAC3-214ENST00000495485 MUTP22033 750 aa11.47□□□□□ -0.57
HDAC3-214ENST00000495485 CCT6AP40227 531 aaKnown RBP11.47□□□□□ -0.57
HDAC3-214ENST00000495485 RGS2P41220 211 aa11.47□□□□□ -0.57
HDAC3-214ENST00000495485 HSD17B4P51659 736 aa11.47□□□□□ -0.57
HDAC3-214ENST00000495485 GHRHRQ02643 423 aa11.47□□□□□ -0.57
HDAC3-214ENST00000495485 SPAG1Q07617 926 aa11.47□□□□□ -0.57
HDAC3-214ENST00000495485 PSMD2Q13200 908 aa11.47□□□□□ -0.57
HDAC3-214ENST00000495485 GRB14Q14449 540 aa11.47□□□□□ -0.57
HDAC3-214ENST00000495485 PLS1Q14651 629 aa11.47□□□□□ -0.57
HDAC3-214ENST00000495485 KCTD2Q14681 263 aa11.47□□□□□ -0.57
HDAC3-214ENST00000495485 PRR16Q569H4 304 aa11.47□□□□□ -0.57
HDAC3-214ENST00000495485 HYIQ5T013 277 aa11.47□□□□□ -0.57
HDAC3-214ENST00000495485 SNRNP48Q6IEG0 339 aaKnown RBP11.47□□□□□ -0.57
HDAC3-214ENST00000495485 XRRA1Q6P2D8 792 aa11.47□□□□□ -0.57
HDAC3-214ENST00000495485 CNNM4Q6P4Q7 775 aa11.47□□□□□ -0.57
HDAC3-214ENST00000495485 GPR142Q7Z601 462 aa11.47□□□□□ -0.57
HDAC3-214ENST00000495485 RAET1EQ8TD07 263 aa11.47□□□□□ -0.57
HDAC3-214ENST00000495485 CRYGNQ8WXF5 182 aa11.47□□□□□ -0.57
HDAC3-214ENST00000495485 LARP4BQ92615 738 aaKnown RBP11.47□□□□□ -0.57
HDAC3-214ENST00000495485 ACAD9Q9H845 621 aa11.47□□□□□ -0.57
HDAC3-214ENST00000495485 KCNMB3Q9NPA1 279 aa11.47□□□□□ -0.57
HDAC3-214ENST00000495485 EXOC1Q9NV70 894 aa11.47□□□□□ -0.57
HDAC3-214ENST00000495485 IMPACTQ9P2X3 320 aa11.47□□□□□ -0.57
HDAC3-214ENST00000495485 TCEAL9Q9UHQ7 104 aa11.47□□□□□ -0.57
HDAC3-214ENST00000495485 PTPN22Q9Y2R2 807 aa11.47□□□□□ -0.57
HDAC3-214ENST00000495485 RBBP6Q7Z6E9 1792 aaKnown RBP11.46□□□□□ -0.57
HDAC3-214ENST00000495485 BICDL2A1A5D9 508 aa11.46□□□□□ -0.57
HDAC3-214ENST00000495485 B4DLN1 442 aa11.46□□□□□ -0.57
HDAC3-214ENST00000495485 RHOBTB3O94955 611 aa11.46□□□□□ -0.57
HDAC3-214ENST00000495485 ALAS1P13196 640 aa11.46□□□□□ -0.57
HDAC3-214ENST00000495485 CDC25AP30304 524 aa11.46□□□□□ -0.57
HDAC3-214ENST00000495485 HOXA13P31271 388 aaPredicted RBP11.46□□□□□ -0.57
HDAC3-214ENST00000495485 GSDMDP57764 484 aa11.46□□□□□ -0.57
HDAC3-214ENST00000495485 MAP2K5Q13163 448 aa11.46□□□□□ -0.57
HDAC3-214ENST00000495485 Q3C1V9 767 aa11.46□□□□□ -0.57
HDAC3-214ENST00000495485 FILIP1LQ4L180 1135 aa11.46□□□□□ -0.57
HDAC3-214ENST00000495485 MORN1Q5T089 497 aa11.46□□□□□ -0.57
HDAC3-214ENST00000495485 SPATA1Q5VX52 437 aa11.46□□□□□ -0.57
HDAC3-214ENST00000495485 NIPA1Q7RTP0 329 aa11.46□□□□□ -0.57
HDAC3-214ENST00000495485 NCAPG2Q86XI2 1143 aa11.46□□□□□ -0.57
HDAC3-214ENST00000495485 GRAMD1CQ8IYS0 662 aa11.46□□□□□ -0.57
HDAC3-214ENST00000495485 CPXCR1Q8N123 301 aa11.46□□□□□ -0.57
HDAC3-214ENST00000495485 HAS1Q92839 578 aa11.46□□□□□ -0.57
HDAC3-214ENST00000495485 MPHOSPH6Q99547 160 aaKnown RBP11.46□□□□□ -0.57
HDAC3-214ENST00000495485 APBA2Q99767 749 aa11.46□□□□□ -0.57
HDAC3-214ENST00000495485 WDR11Q9BZH6 1224 aa11.46□□□□□ -0.57
HDAC3-214ENST00000495485 NRBP1Q9UHY1 535 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms