RNA–Protein interactions for RNA: ENST00000495394.1

RPSA-209, Transcript of ribosomal protein SA, humanhuman

TSL 1 (best)

Gene RPSA, Length 2,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-209ENST00000495394 C21orf58P58505 322 aa10.27□□□□□ -0.77
RPSA-209ENST00000495394 NCBP1Q09161 790 aaKnown RBP10.27□□□□□ -0.77
RPSA-209ENST00000495394 TTF1Q15361 905 aaPredicted RBP10.27□□□□□ -0.77
RPSA-209ENST00000495394 FAM173BQ6P4H8 233 aa10.27□□□□□ -0.77
RPSA-209ENST00000495394 TMC4Q7Z404 712 aa10.27□□□□□ -0.77
RPSA-209ENST00000495394 TADA2BQ86TJ2 420 aa10.27□□□□□ -0.77
RPSA-209ENST00000495394 JAMLQ86YT9 394 aa10.27□□□□□ -0.77
RPSA-209ENST00000495394 TCP11L2Q8N4U5 519 aa10.27□□□□□ -0.77
RPSA-209ENST00000495394 TMEM87AQ8NBN3 555 aa10.27□□□□□ -0.77
RPSA-209ENST00000495394 C7orf57Q8NEG2 295 aa10.27□□□□□ -0.77
RPSA-209ENST00000495394 GTF3C6Q969F1 213 aa10.27□□□□□ -0.77
RPSA-209ENST00000495394 CNDP1Q96KN2 507 aa10.27□□□□□ -0.77
RPSA-209ENST00000495394 SNX27Q96L92 541 aa10.27□□□□□ -0.77
RPSA-209ENST00000495394 SAMD11Q96NU1 681 aa10.27□□□□□ -0.77
RPSA-209ENST00000495394 SERHL2Q9H4I8 314 aa10.27□□□□□ -0.77
RPSA-209ENST00000495394 SAGE1Q9NXZ1 904 aa10.27□□□□□ -0.77
RPSA-209ENST00000495394 HESX1Q9UBX0 185 aa10.27□□□□□ -0.77
RPSA-209ENST00000495394 AGO2Q9UKV8 859 aaKnown RBP10.27□□□□□ -0.77
RPSA-209ENST00000495394 STRIP2Q9ULQ0 834 aa10.27□□□□□ -0.77
RPSA-209ENST00000495394 SPG7Q9UQ90 795 aa10.27□□□□□ -0.77
RPSA-209ENST00000495394 AXIN2Q9Y2T1 843 aa10.27□□□□□ -0.77
RPSA-209ENST00000495394 CYTH3O43739 400 aa10.26□□□□□ -0.77
RPSA-209ENST00000495394 TUFMP49411 452 aaKnown RBP10.26□□□□□ -0.77
RPSA-209ENST00000495394 BLVRAP53004 296 aa10.26□□□□□ -0.77
RPSA-209ENST00000495394 TPM4P67936 248 aa10.26□□□□□ -0.77
RPSA-209ENST00000495394 RUNX1T1Q06455 604 aa10.26□□□□□ -0.77
RPSA-209ENST00000495394 NUGGCQ68CJ6 796 aa10.26□□□□□ -0.77
RPSA-209ENST00000495394 DGKHQ86XP1 1220 aa10.26□□□□□ -0.77
RPSA-209ENST00000495394 FAM9CQ8IZT9 166 aa10.26□□□□□ -0.77
RPSA-209ENST00000495394 PDCD7Q8N8D1 485 aaKnown RBP10.26□□□□□ -0.77
RPSA-209ENST00000495394 MTMR14Q8NCE2 650 aa10.26□□□□□ -0.77
RPSA-209ENST00000495394 TTC8Q8TAM2 541 aa10.26□□□□□ -0.77
RPSA-209ENST00000495394 SMARCC2Q8TAQ2 1214 aa10.26□□□□□ -0.77
RPSA-209ENST00000495394 GDAP1Q8TB36 358 aa10.26□□□□□ -0.77
RPSA-209ENST00000495394 CCT7Q99832 543 aa10.26□□□□□ -0.77
RPSA-209ENST00000495394 EIF2AK1Q9BQI3 630 aaKnown RBP10.26□□□□□ -0.77
RPSA-209ENST00000495394 GORASP1Q9BQQ3 440 aa10.26□□□□□ -0.77
RPSA-209ENST00000495394 CYP2D7A0A087X1C5 515 aa10.26□□□□□ -0.77
RPSA-209ENST00000495394 SYNDIG1LA6NDD5 238 aa10.26□□□□□ -0.77
RPSA-209ENST00000495394 NR1I2O75469 434 aa10.26□□□□□ -0.77
RPSA-209ENST00000495394 IFIT2P09913 472 aaKnown RBP10.26□□□□□ -0.77
RPSA-209ENST00000495394 PSMA4P25789 261 aaKnown RBP10.26□□□□□ -0.77
RPSA-209ENST00000495394 HNRNPH1P31943 449 aaKnown RBP10.26□□□□□ -0.77
RPSA-209ENST00000495394 HOXD12P35452 270 aa10.26□□□□□ -0.77
RPSA-209ENST00000495394 MLLT3P42568 568 aaPredicted RBP10.26□□□□□ -0.77
RPSA-209ENST00000495394 DSTNP60981 165 aa10.26□□□□□ -0.77
RPSA-209ENST00000495394 SCRN1Q12765 414 aa10.26□□□□□ -0.77
RPSA-209ENST00000495394 INTS3Q68E01 1043 aaKnown RBP10.26□□□□□ -0.77
RPSA-209ENST00000495394 POMZP3Q6PJE2 187 aa10.26□□□□□ -0.77
RPSA-209ENST00000495394 ZNF600Q6ZNG1 722 aa10.26□□□□□ -0.77
RPSA-209ENST00000495394 SH3BP5LQ7L8J4 393 aa10.26□□□□□ -0.77
RPSA-209ENST00000495394 ZER1Q7Z7L7 766 aa10.26□□□□□ -0.77
RPSA-209ENST00000495394 TBC1D21Q8IYX1 336 aa10.26□□□□□ -0.77
RPSA-209ENST00000495394 SYT2Q8N9I0 419 aaPredicted RBP10.26□□□□□ -0.77
RPSA-209ENST00000495394 NEK11Q8NG66 645 aa10.26□□□□□ -0.77
RPSA-209ENST00000495394 MAELQ96JY0 434 aaKnown RBP10.26□□□□□ -0.77
RPSA-209ENST00000495394 SMARCAD1Q9H4L7 1026 aa10.26□□□□□ -0.77
RPSA-209ENST00000495394 HECAQ9UBI9 543 aaPredicted RBP10.26□□□□□ -0.77
RPSA-209ENST00000495394 CRB1P82279 1406 aa10.25□□□□□ -0.77
RPSA-209ENST00000495394 WDR17Q8IZU2 1322 aa10.25□□□□□ -0.77
RPSA-209ENST00000495394 GLI3P10071 1580 aa10.25□□□□□ -0.77
RPSA-209ENST00000495394 SYNJ2BP-COX16A0A087WUM0 186 aa10.25□□□□□ -0.77
RPSA-209ENST00000495394 GOLGA6L9A6NEM1 432 aa10.25□□□□□ -0.77
RPSA-209ENST00000495394 NDC80O14777 642 aa10.25□□□□□ -0.77
RPSA-209ENST00000495394 PNMA6AP0CW24 399 aaPredicted RBP10.25□□□□□ -0.77
RPSA-209ENST00000495394 HCLS1P14317 486 aaPredicted RBP10.25□□□□□ -0.77
RPSA-209ENST00000495394 LMOD1P29536 600 aaPredicted RBP10.25□□□□□ -0.77
RPSA-209ENST00000495394 ASMTP46597 345 aa10.25□□□□□ -0.77
RPSA-209ENST00000495394 CLDN10P78369 228 aa10.25□□□□□ -0.77
RPSA-209ENST00000495394 NFIAQ12857 509 aa10.25□□□□□ -0.77
RPSA-209ENST00000495394 PDE3AQ14432 1141 aa10.25□□□□□ -0.77
RPSA-209ENST00000495394 PLCB4Q15147 1175 aa10.25□□□□□ -0.77
RPSA-209ENST00000495394 C15orf59Q2T9L4 293 aaPredicted RBP10.25□□□□□ -0.77
RPSA-209ENST00000495394 C1orf122Q6ZSJ8 110 aa10.25□□□□□ -0.77
RPSA-209ENST00000495394 ATG9AQ7Z3C6 839 aa10.25□□□□□ -0.77
RPSA-209ENST00000495394 GALNT5Q7Z7M9 940 aa10.25□□□□□ -0.77
RPSA-209ENST00000495394 CABP7Q86V35 215 aa10.25□□□□□ -0.77
RPSA-209ENST00000495394 CCDC83Q8IWF9 413 aa10.25□□□□□ -0.77
RPSA-209ENST00000495394 CCDC170Q8IYT3 715 aa10.25□□□□□ -0.77
RPSA-209ENST00000495394 FATE1Q969F0 183 aa10.25□□□□□ -0.77
RPSA-209ENST00000495394 TBATAQ96M53 351 aa10.25□□□□□ -0.77
RPSA-209ENST00000495394 STRN4Q9NRL3 753 aa10.25□□□□□ -0.77
RPSA-209ENST00000495394 MOCS1Q9NZB8 636 aa10.25□□□□□ -0.77
RPSA-209ENST00000495394 CEP72Q9P209 647 aa10.25□□□□□ -0.77
RPSA-209ENST00000495394 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.25□□□□□ -0.77
RPSA-209ENST00000495394 MAPK8IP3Q9UPT6 1336 aa10.25□□□□□ -0.77
RPSA-209ENST00000495394 C17orf113A0A1B0GUU1 675 aa10.24□□□□□ -0.77
RPSA-209ENST00000495394 DDX11L8A8MPP1 907 aa10.24□□□□□ -0.77
RPSA-209ENST00000495394 SNX4O95219 450 aa10.24□□□□□ -0.77
RPSA-209ENST00000495394 MAP3K6O95382 1288 aa10.24□□□□□ -0.77
RPSA-209ENST00000495394 ANXA13P27216 316 aa10.24□□□□□ -0.77
RPSA-209ENST00000495394 PBLDP30039 288 aaPredicted RBP10.24□□□□□ -0.77
RPSA-209ENST00000495394 CLNS1AP54105 237 aaKnown RBP10.24□□□□□ -0.77
RPSA-209ENST00000495394 MLLT1Q03111 559 aaPredicted RBP10.24□□□□□ -0.77
RPSA-209ENST00000495394 CBX3Q13185 183 aa10.24□□□□□ -0.77
RPSA-209ENST00000495394 WSCD2Q2TBF2 565 aa10.24□□□□□ -0.77
RPSA-209ENST00000495394 USH1GQ495M9 461 aa10.24□□□□□ -0.77
RPSA-209ENST00000495394 DACT2Q5SW24 774 aa10.24□□□□□ -0.77
RPSA-209ENST00000495394 BEND6Q5SZJ8 279 aaPredicted RBP10.24□□□□□ -0.77
RPSA-209ENST00000495394 CLEC17AQ6ZS10 378 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms