RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 ELP1O95163 1332 aa13.72□□□□□ -0.21
CSNK1E-213ENST00000495232 EVI5O60447 810 aa13.72□□□□□ -0.21
CSNK1E-213ENST00000495232 PPFIA4O75335 1185 aa13.72□□□□□ -0.21
CSNK1E-213ENST00000495232 MMP3P08254 477 aa13.72□□□□□ -0.21
CSNK1E-213ENST00000495232 ARP10275 920 aa13.72□□□□□ -0.21
CSNK1E-213ENST00000495232 KCNA2P16389 499 aa13.72□□□□□ -0.21
CSNK1E-213ENST00000495232 CIITAP33076 1130 aa13.72□□□□□ -0.21
CSNK1E-213ENST00000495232 SP4Q02446 784 aa13.72□□□□□ -0.21
CSNK1E-213ENST00000495232 LETM2Q2VYF4 491 aa13.72□□□□□ -0.21
CSNK1E-213ENST00000495232 SLC39A5Q6ZMH5 540 aa13.72□□□□□ -0.21
CSNK1E-213ENST00000495232 NEK8Q86SG6 692 aa13.72□□□□□ -0.21
CSNK1E-213ENST00000495232 ZNF577Q9BSK1 485 aa13.72□□□□□ -0.21
CSNK1E-213ENST00000495232 MTG1Q9BT17 334 aaPredicted RBP13.72□□□□□ -0.21
CSNK1E-213ENST00000495232 AGO4Q9HCK5 861 aaKnown RBP13.72□□□□□ -0.21
CSNK1E-213ENST00000495232 A0A0U1RQG5 324 aaPredicted RBP13.71□□□□□ -0.21
CSNK1E-213ENST00000495232 IPO5O00410 1097 aaKnown RBP13.71□□□□□ -0.21
CSNK1E-213ENST00000495232 TNRC18O15417 2968 aaPredicted RBP13.71□□□□□ -0.21
CSNK1E-213ENST00000495232 MARCH6O60337 910 aa13.71□□□□□ -0.21
CSNK1E-213ENST00000495232 CCNT1O60563 726 aaKnown RBP13.71□□□□□ -0.21
CSNK1E-213ENST00000495232 ATP9AO75110 1047 aa13.71□□□□□ -0.21
CSNK1E-213ENST00000495232 GCFC2P16383 781 aaKnown RBP13.71□□□□□ -0.21
CSNK1E-213ENST00000495232 CHMP4BP1P59074 171 aa13.71□□□□□ -0.21
CSNK1E-213ENST00000495232 PURAQ00577 322 aaKnown RBP13.71□□□□□ -0.21
CSNK1E-213ENST00000495232 HSDL1Q3SXM5 330 aa13.71□□□□□ -0.21
CSNK1E-213ENST00000495232 LARP1BQ659C4 914 aaKnown RBP13.71□□□□□ -0.21
CSNK1E-213ENST00000495232 MCTP1Q6DN14 999 aa13.71□□□□□ -0.21
CSNK1E-213ENST00000495232 MOXD1Q6UVY6 613 aa13.71□□□□□ -0.21
CSNK1E-213ENST00000495232 INTS4Q96HW7 963 aaKnown RBP13.71□□□□□ -0.21
CSNK1E-213ENST00000495232 FOXP1Q9H334 677 aaPredicted RBP13.71□□□□□ -0.21
CSNK1E-213ENST00000495232 JPH1Q9HDC5 661 aaPredicted RBP13.71□□□□□ -0.21
CSNK1E-213ENST00000495232 TBC1D22BQ9NU19 505 aa13.71□□□□□ -0.21
CSNK1E-213ENST00000495232 SLC9A2Q9UBY0 812 aa13.71□□□□□ -0.21
CSNK1E-213ENST00000495232 DDX25Q9UHL0 483 aaKnown RBP13.71□□□□□ -0.21
CSNK1E-213ENST00000495232 NFASCO94856 1347 aa13.7□□□□□ -0.22
CSNK1E-213ENST00000495232 MROH7Q68CQ1 1323 aa13.7□□□□□ -0.22
CSNK1E-213ENST00000495232 IGLV3-22A0A075B6J6 115 aa13.7□□□□□ -0.22
CSNK1E-213ENST00000495232 CYP3A7-CYP3A51PA0A087WV96 503 aa13.7□□□□□ -0.22
CSNK1E-213ENST00000495232 PDCP20941 246 aa13.7□□□□□ -0.22
CSNK1E-213ENST00000495232 CYP3A7P24462 503 aa13.7□□□□□ -0.22
CSNK1E-213ENST00000495232 LRRC26Q2I0M4 334 aa13.7□□□□□ -0.22
CSNK1E-213ENST00000495232 Q4G0T1 1027 aa13.7□□□□□ -0.22
CSNK1E-213ENST00000495232 KATNAL1Q9BW62 490 aa13.7□□□□□ -0.22
CSNK1E-213ENST00000495232 SEZ6LQ9BYH1 1024 aa13.7□□□□□ -0.22
CSNK1E-213ENST00000495232 FOXD4L1Q9NU39 408 aa13.7□□□□□ -0.22
CSNK1E-213ENST00000495232 ATP11BQ9Y2G3 1177 aa13.7□□□□□ -0.22
CSNK1E-213ENST00000495232 NR2E3Q9Y5X4 410 aa13.7□□□□□ -0.22
CSNK1E-213ENST00000495232 DOCK5Q9H7D0 1870 aa13.7□□□□□ -0.22
CSNK1E-213ENST00000495232 DDX39AO00148 427 aaKnown RBP13.69□□□□□ -0.22
CSNK1E-213ENST00000495232 ARVCFO00192 962 aa13.69□□□□□ -0.22
CSNK1E-213ENST00000495232 TDP2O95551 362 aa13.69□□□□□ -0.22
CSNK1E-213ENST00000495232 RTP1P59025 263 aa13.69□□□□□ -0.22
CSNK1E-213ENST00000495232 ITGA7Q13683 1181 aa13.69□□□□□ -0.22
CSNK1E-213ENST00000495232 C1orf53Q5VUE5 145 aa13.69□□□□□ -0.22
CSNK1E-213ENST00000495232 PPP4R3AQ6IN85 833 aa13.69□□□□□ -0.22
CSNK1E-213ENST00000495232 SEPT1Q8WYJ6 367 aa13.69□□□□□ -0.22
CSNK1E-213ENST00000495232 TNFRSF25Q93038 417 aa13.69□□□□□ -0.22
CSNK1E-213ENST00000495232 UIMC1Q96RL1 719 aa13.69□□□□□ -0.22
CSNK1E-213ENST00000495232 GPR20Q99678 358 aa13.69□□□□□ -0.22
CSNK1E-213ENST00000495232 BCAS3Q9H6U6 928 aa13.69□□□□□ -0.22
CSNK1E-213ENST00000495232 ZNF215Q9UL58 517 aaPredicted RBP13.69□□□□□ -0.22
CSNK1E-213ENST00000495232 NOL7Q9UMY1 257 aaKnown RBP13.69□□□□□ -0.22
CSNK1E-213ENST00000495232 DCDC2CA8MYV0 355 aa13.68□□□□□ -0.22
CSNK1E-213ENST00000495232 PQBP1O60828 265 aaKnown RBP13.68□□□□□ -0.22
CSNK1E-213ENST00000495232 GAS7O60861 476 aa13.68□□□□□ -0.22
CSNK1E-213ENST00000495232 BAG4O95429 457 aaKnown RBP13.68□□□□□ -0.22
CSNK1E-213ENST00000495232 ZNF286BP0CG31 522 aa13.68□□□□□ -0.22
CSNK1E-213ENST00000495232 TCF7P36402 384 aaPredicted RBP13.68□□□□□ -0.22
CSNK1E-213ENST00000495232 PSMC6P62333 389 aa13.68□□□□□ -0.22
CSNK1E-213ENST00000495232 ITGB3BPQ13352 177 aaPredicted RBP13.68□□□□□ -0.22
CSNK1E-213ENST00000495232 TRIM60Q495X7 471 aa13.68□□□□□ -0.22
CSNK1E-213ENST00000495232 FAM47CQ5HY64 1035 aa13.68□□□□□ -0.22
CSNK1E-213ENST00000495232 EARS2Q5JPH6 523 aaKnown RBP13.68□□□□□ -0.22
CSNK1E-213ENST00000495232 UTP14CQ5TAP6 766 aaKnown RBP13.68□□□□□ -0.22
CSNK1E-213ENST00000495232 LRCH2Q5VUJ6 765 aa13.68□□□□□ -0.22
CSNK1E-213ENST00000495232 NOSTRINQ8IVI9 506 aa13.68□□□□□ -0.22
CSNK1E-213ENST00000495232 C7orf61Q8IZ16 206 aa13.68□□□□□ -0.22
CSNK1E-213ENST00000495232 AZI2Q9H6S1 392 aa13.68□□□□□ -0.22
CSNK1E-213ENST00000495232 PRKAG2Q9UGJ0 569 aa13.68□□□□□ -0.22
CSNK1E-213ENST00000495232 SAMM50Q9Y512 469 aa13.68□□□□□ -0.22
CSNK1E-213ENST00000495232 VPS37CA5D8V6 355 aaPredicted RBP13.67□□□□□ -0.22
CSNK1E-213ENST00000495232 FAM205CA6NFA0 338 aa13.67□□□□□ -0.22
CSNK1E-213ENST00000495232 H3BRB1 525 aa13.67□□□□□ -0.22
CSNK1E-213ENST00000495232 TLR3O15455 904 aaKnown RBP13.67□□□□□ -0.22
CSNK1E-213ENST00000495232 MSH4O15457 936 aa13.67□□□□□ -0.22
CSNK1E-213ENST00000495232 LGALS2P05162 132 aa13.67□□□□□ -0.22
CSNK1E-213ENST00000495232 HOXD8P13378 290 aaPredicted RBP13.67□□□□□ -0.22
CSNK1E-213ENST00000495232 ATP2B1P20020 1258 aa13.67□□□□□ -0.22
CSNK1E-213ENST00000495232 U2AF2P26368 475 aaKnown RBP eCLIP13.67□□□□□ -0.22
CSNK1E-213ENST00000495232 PSEN2P49810 448 aa13.67□□□□□ -0.22
CSNK1E-213ENST00000495232 ACTR2P61160 394 aa13.67□□□□□ -0.22
CSNK1E-213ENST00000495232 KRT76Q01546 638 aa13.67□□□□□ -0.22
CSNK1E-213ENST00000495232 BECN1Q14457 450 aa13.67□□□□□ -0.22
CSNK1E-213ENST00000495232 SNX17Q15036 470 aa13.67□□□□□ -0.22
CSNK1E-213ENST00000495232 NBPF20Q3BBV1 942 aa13.67□□□□□ -0.22
CSNK1E-213ENST00000495232 C7orf31Q8N865 590 aa13.67□□□□□ -0.22
CSNK1E-213ENST00000495232 GLG1Q92896 1179 aa13.67□□□□□ -0.22
CSNK1E-213ENST00000495232 LENG9Q96B70 501 aa13.67□□□□□ -0.22
CSNK1E-213ENST00000495232 RIT2Q99578 217 aa13.67□□□□□ -0.22
CSNK1E-213ENST00000495232 TEKT3Q9BXF9 490 aa13.67□□□□□ -0.22
CSNK1E-213ENST00000495232 TUT1Q9H6E5 874 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms