RNA–Protein interactions for RNA: ENST00000494980.5

CHMP2B-205, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 3 BASIC

Gene CHMP2B, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-205ENST00000494980 ALDH1L2Q3SY69 923 aa17.3■□□□□ 0.36
CHMP2B-205ENST00000494980 NAALADL2Q58DX5 795 aa17.3■□□□□ 0.36
CHMP2B-205ENST00000494980 CRIPAKQ8N1N5 446 aa17.3■□□□□ 0.36
CHMP2B-205ENST00000494980 STAG1Q8WVM7 1258 aa17.3■□□□□ 0.36
CHMP2B-205ENST00000494980 MKL1Q969V6 931 aa17.3■□□□□ 0.36
CHMP2B-205ENST00000494980 EAF2Q96CJ1 260 aaPredicted RBP17.3■□□□□ 0.36
CHMP2B-205ENST00000494980 CEP95Q96GE4 821 aa17.3■□□□□ 0.36
CHMP2B-205ENST00000494980 DDRGK1Q96HY6 314 aa17.3■□□□□ 0.36
CHMP2B-205ENST00000494980 NOB1Q9ULX3 412 aaKnown RBP17.3■□□□□ 0.36
CHMP2B-205ENST00000494980 HAS3O00219 553 aa17.29■□□□□ 0.36
CHMP2B-205ENST00000494980 EDNRBP24530 442 aa17.29■□□□□ 0.36
CHMP2B-205ENST00000494980 CALML3P27482 149 aa17.29■□□□□ 0.36
CHMP2B-205ENST00000494980 TECP42680 631 aa17.29■□□□□ 0.36
CHMP2B-205ENST00000494980 TTF1Q15361 905 aaPredicted RBP17.29■□□□□ 0.36
CHMP2B-205ENST00000494980 ANKRD54Q6NXT1 300 aa17.29■□□□□ 0.36
CHMP2B-205ENST00000494980 CCDC62Q6P9F0 684 aa17.29■□□□□ 0.36
CHMP2B-205ENST00000494980 CTR9Q6PD62 1173 aa17.29■□□□□ 0.36
CHMP2B-205ENST00000494980 SYCE2Q6PIF2 218 aa17.29■□□□□ 0.36
CHMP2B-205ENST00000494980 APBB2Q92870 758 aa17.29■□□□□ 0.36
CHMP2B-205ENST00000494980 ZNF689Q96CS4 500 aaPredicted RBP17.29■□□□□ 0.36
CHMP2B-205ENST00000494980 API5Q9BZZ5 524 aaKnown RBP17.29■□□□□ 0.36
CHMP2B-205ENST00000494980 NAV2Q8IVL1 2488 aa17.28■□□□□ 0.36
CHMP2B-205ENST00000494980 ZBED9Q6R2W3 1325 aa17.28■□□□□ 0.36
CHMP2B-205ENST00000494980 GNAI2P04899 355 aa17.28■□□□□ 0.36
CHMP2B-205ENST00000494980 SRGAP2BP0DMP2 458 aa17.28■□□□□ 0.36
CHMP2B-205ENST00000494980 DUSP6Q16828 381 aa17.28■□□□□ 0.36
CHMP2B-205ENST00000494980 LY6KQ17RY6 165 aa17.28■□□□□ 0.36
CHMP2B-205ENST00000494980 SLFNL1Q499Z3 407 aa17.28■□□□□ 0.36
CHMP2B-205ENST00000494980 SUMF1Q8NBK3 374 aa17.28■□□□□ 0.36
CHMP2B-205ENST00000494980 MPHOSPH6Q99547 160 aaKnown RBP17.28■□□□□ 0.36
CHMP2B-205ENST00000494980 RTKNQ9BST9 563 aa17.28■□□□□ 0.36
CHMP2B-205ENST00000494980 POMKQ9H5K3 350 aa17.28■□□□□ 0.36
CHMP2B-205ENST00000494980 MKNK2Q9HBH9 465 aa17.28■□□□□ 0.36
CHMP2B-205ENST00000494980 SYNPO2Q9UMS6 1093 aa17.28■□□□□ 0.36
CHMP2B-205ENST00000494980 MYH7P12883 1935 aa17.27■□□□□ 0.36
CHMP2B-205ENST00000494980 FSD2A1L4K1 749 aa17.27■□□□□ 0.36
CHMP2B-205ENST00000494980 TTLL1O95922 423 aa17.27■□□□□ 0.36
CHMP2B-205ENST00000494980 MICAL1Q8TDZ2 1067 aa17.27■□□□□ 0.36
CHMP2B-205ENST00000494980 ERVK-5Q9HDB9 667 aa17.27■□□□□ 0.36
CHMP2B-205ENST00000494980 MTMR4Q9NYA4 1195 aa17.27■□□□□ 0.36
CHMP2B-205ENST00000494980 NCDNQ9UBB6 729 aa17.27■□□□□ 0.36
CHMP2B-205ENST00000494980 PRR12Q9ULL5 1215 aa17.27■□□□□ 0.36
CHMP2B-205ENST00000494980 PPFIA3O75145 1194 aa17.26■□□□□ 0.35
CHMP2B-205ENST00000494980 ICAM1P05362 532 aa17.26■□□□□ 0.35
CHMP2B-205ENST00000494980 SLC1A4P43007 532 aa17.26■□□□□ 0.35
CHMP2B-205ENST00000494980 KCTD1Q719H9 257 aa17.26■□□□□ 0.35
CHMP2B-205ENST00000494980 CDCA3Q99618 268 aaPredicted RBP17.26■□□□□ 0.35
CHMP2B-205ENST00000494980 RNF39Q9H2S5 420 aa17.26■□□□□ 0.35
CHMP2B-205ENST00000494980 LIMD1Q9UGP4 676 aa17.26■□□□□ 0.35
CHMP2B-205ENST00000494980 UNC79Q9P2D8 2635 aa17.26■□□□□ 0.35
CHMP2B-205ENST00000494980 SMG1Q96Q15 3661 aaKnown RBP17.26■□□□□ 0.35
CHMP2B-205ENST00000494980 PRR5-ARHGAP8B1AHC4 643 aa17.25■□□□□ 0.35
CHMP2B-205ENST00000494980 SURF6O75683 361 aaKnown RBP17.25■□□□□ 0.35
CHMP2B-205ENST00000494980 ARHGAP8P85298 464 aa17.25■□□□□ 0.35
CHMP2B-205ENST00000494980 LMNB2Q03252 620 aa17.25■□□□□ 0.35
CHMP2B-205ENST00000494980 PPM1JQ5JR12 505 aa17.25■□□□□ 0.35
CHMP2B-205ENST00000494980 LLGL2Q6P1M3 1020 aa17.25■□□□□ 0.35
CHMP2B-205ENST00000494980 SIX5Q8N196 739 aa17.25■□□□□ 0.35
CHMP2B-205ENST00000494980 GMCL1Q96IK5 515 aa17.25■□□□□ 0.35
CHMP2B-205ENST00000494980 ARPP21Q9UBL0 812 aaPredicted RBP17.25■□□□□ 0.35
CHMP2B-205ENST00000494980 SLC4A4Q9Y6R1 1079 aa17.25■□□□□ 0.35
CHMP2B-205ENST00000494980 HELZ2Q9BYK8 2649 aaKnown RBP17.25■□□□□ 0.35
CHMP2B-205ENST00000494980 GOLIM4O00461 696 aa17.24■□□□□ 0.35
CHMP2B-205ENST00000494980 DGKIO75912 1065 aa17.24■□□□□ 0.35
CHMP2B-205ENST00000494980 SP9P0CG40 484 aa17.24■□□□□ 0.35
CHMP2B-205ENST00000494980 MCCP23508 829 aa17.24■□□□□ 0.35
CHMP2B-205ENST00000494980 KCNC3Q14003 757 aa17.24■□□□□ 0.35
CHMP2B-205ENST00000494980 POLA2Q14181 598 aa17.24■□□□□ 0.35
CHMP2B-205ENST00000494980 TMEM184AQ6ZMB5 413 aa17.24■□□□□ 0.35
CHMP2B-205ENST00000494980 RNF207Q6ZRF8 634 aa17.24■□□□□ 0.35
CHMP2B-205ENST00000494980 SEPT14Q6ZU15 432 aa17.24■□□□□ 0.35
CHMP2B-205ENST00000494980 TDRD5Q8NAT2 981 aaKnown RBP17.24■□□□□ 0.35
CHMP2B-205ENST00000494980 ATP6V0A1Q93050 837 aa17.24■□□□□ 0.35
CHMP2B-205ENST00000494980 FBXL21Q9UKT6 434 aa17.24■□□□□ 0.35
CHMP2B-205ENST00000494980 BPTFQ12830 3046 aa17.24■□□□□ 0.35
CHMP2B-205ENST00000494980 PLA2G6O60733 806 aa17.23■□□□□ 0.35
CHMP2B-205ENST00000494980 PAN2Q504Q3 1202 aaKnown RBP17.23■□□□□ 0.35
CHMP2B-205ENST00000494980 VARS2Q5ST30 1063 aaKnown RBP17.23■□□□□ 0.35
CHMP2B-205ENST00000494980 RASGRP2Q7LDG7 609 aa17.23■□□□□ 0.35
CHMP2B-205ENST00000494980 CMTR2Q8IYT2 770 aaKnown RBP17.23■□□□□ 0.35
CHMP2B-205ENST00000494980 GPR161Q8N6U8 529 aaKnown RBP17.23■□□□□ 0.35
CHMP2B-205ENST00000494980 WDFY3Q8IZQ1 3526 aa17.22■□□□□ 0.35
CHMP2B-205ENST00000494980 C17orf102A2RUQ5 167 aa17.22■□□□□ 0.35
CHMP2B-205ENST00000494980 SOBPA7XYQ1 873 aa17.22■□□□□ 0.35
CHMP2B-205ENST00000494980 KINO60870 393 aaKnown RBP17.22■□□□□ 0.35
CHMP2B-205ENST00000494980 CAND2O75155 1236 aa17.22■□□□□ 0.35
CHMP2B-205ENST00000494980 PRDM1O75626 825 aa17.22■□□□□ 0.35
CHMP2B-205ENST00000494980 HOXB8P17481 243 aaPredicted RBP17.22■□□□□ 0.35
CHMP2B-205ENST00000494980 RPS6P62753 249 aaKnown RBP17.22■□□□□ 0.35
CHMP2B-205ENST00000494980 ZDHHC14Q8IZN3 488 aa17.22■□□□□ 0.35
CHMP2B-205ENST00000494980 DNERQ8NFT8 737 aa17.22■□□□□ 0.35
CHMP2B-205ENST00000494980 NECTIN4Q96NY8 510 aa17.22■□□□□ 0.35
CHMP2B-205ENST00000494980 DNAJC2Q99543 621 aaKnown RBP17.22■□□□□ 0.35
CHMP2B-205ENST00000494980 ITPR1Q14643 2758 aa17.22■□□□□ 0.35
CHMP2B-205ENST00000494980 DENND4AQ7Z401 1863 aa17.21■□□□□ 0.35
CHMP2B-205ENST00000494980 STK25O00506 426 aa17.21■□□□□ 0.35
CHMP2B-205ENST00000494980 TREHO43280 583 aa17.21■□□□□ 0.35
CHMP2B-205ENST00000494980 PPTC7Q8NI37 304 aa17.21■□□□□ 0.35
CHMP2B-205ENST00000494980 CLEC4DQ8WXI8 215 aa17.21■□□□□ 0.35
CHMP2B-205ENST00000494980 EMID1Q96A84 441 aaPredicted RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms