RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 DEXIO95424 95 aa20.14■□□□□ 0.81
HDAC4-211ENST00000494800 CYP2C9P11712 490 aa20.14■□□□□ 0.81
HDAC4-211ENST00000494800 SREBF1P36956 1147 aa20.14■□□□□ 0.81
HDAC4-211ENST00000494800 CCL23P55773 120 aa20.14■□□□□ 0.81
HDAC4-211ENST00000494800 JAKMIP3Q5VZ66 844 aa20.14■□□□□ 0.81
HDAC4-211ENST00000494800 RPUSD2Q8IZ73 545 aaKnown RBP20.14■□□□□ 0.81
HDAC4-211ENST00000494800 LRCH3Q96II8 777 aa20.14■□□□□ 0.81
HDAC4-211ENST00000494800 PGBD1Q96JS3 809 aa20.14■□□□□ 0.81
HDAC4-211ENST00000494800 GPR20Q99678 358 aa20.14■□□□□ 0.81
HDAC4-211ENST00000494800 MXRA8Q9BRK3 442 aa20.14■□□□□ 0.81
HDAC4-211ENST00000494800 LARP6Q9BRS8 491 aaKnown RBP20.14■□□□□ 0.81
HDAC4-211ENST00000494800 MTIF3Q9H2K0 278 aaKnown RBP20.14■□□□□ 0.81
HDAC4-211ENST00000494800 IL23AQ9NPF7 189 aa20.14■□□□□ 0.81
HDAC4-211ENST00000494800 TMEM260Q9NX78 707 aa20.14■□□□□ 0.81
HDAC4-211ENST00000494800 GTF2IRD1Q9UHL9 959 aa20.14■□□□□ 0.81
HDAC4-211ENST00000494800 SCN10AQ9Y5Y9 1956 aa20.14■□□□□ 0.81
HDAC4-211ENST00000494800 H3BRB1 525 aa20.13■□□□□ 0.81
HDAC4-211ENST00000494800 HAS3O00219 553 aa20.13■□□□□ 0.81
HDAC4-211ENST00000494800 PITPNM1O00562 1244 aa20.13■□□□□ 0.81
HDAC4-211ENST00000494800 PPFIA3O75145 1194 aa20.13■□□□□ 0.81
HDAC4-211ENST00000494800 LGALS2P05162 132 aa20.13■□□□□ 0.81
HDAC4-211ENST00000494800 EPHB4P54760 987 aa20.13■□□□□ 0.81
HDAC4-211ENST00000494800 SP4Q02446 784 aa20.13■□□□□ 0.81
HDAC4-211ENST00000494800 CEP55Q53EZ4 464 aa20.13■□□□□ 0.81
HDAC4-211ENST00000494800 CAGE1Q8TC20 777 aa20.13■□□□□ 0.81
HDAC4-211ENST00000494800 SDF4Q9BRK5 362 aa20.13■□□□□ 0.81
HDAC4-211ENST00000494800 TUT1Q9H6E5 874 aaKnown RBP20.13■□□□□ 0.81
HDAC4-211ENST00000494800 HDAC6Q9UBN7 1215 aa20.13■□□□□ 0.81
HDAC4-211ENST00000494800 KCNA2P16389 499 aa20.12■□□□□ 0.81
HDAC4-211ENST00000494800 NLRP5P59047 1200 aa20.12■□□□□ 0.81
HDAC4-211ENST00000494800 ARHGAP4P98171 946 aa20.12■□□□□ 0.81
HDAC4-211ENST00000494800 GDF6Q6KF10 455 aaPredicted RBP20.12■□□□□ 0.81
HDAC4-211ENST00000494800 FAM177A1Q8N128 213 aaPredicted RBP20.12■□□□□ 0.81
HDAC4-211ENST00000494800 PPP1R13LQ8WUF5 828 aa20.12■□□□□ 0.81
HDAC4-211ENST00000494800 IL17RAQ96F46 866 aa20.12■□□□□ 0.81
HDAC4-211ENST00000494800 C16orf70Q9BSU1 422 aa20.12■□□□□ 0.81
HDAC4-211ENST00000494800 KCNH7Q9NS40 1196 aa20.12■□□□□ 0.81
HDAC4-211ENST00000494800 PKD2L1Q9P0L9 805 aa20.12■□□□□ 0.81
HDAC4-211ENST00000494800 VPS54Q9P1Q0 977 aa20.12■□□□□ 0.81
HDAC4-211ENST00000494800 UMODL1Q5DID0 1318 aa20.11■□□□□ 0.81
HDAC4-211ENST00000494800 PFKMP08237 780 aa20.11■□□□□ 0.81
HDAC4-211ENST00000494800 XBP1P17861 261 aa20.11■□□□□ 0.81
HDAC4-211ENST00000494800 RFC2P35250 354 aa20.11■□□□□ 0.81
HDAC4-211ENST00000494800 NIPA1Q7RTP0 329 aa20.11■□□□□ 0.81
HDAC4-211ENST00000494800 SEPT1Q8WYJ6 367 aa20.11■□□□□ 0.81
HDAC4-211ENST00000494800 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.11■□□□□ 0.81
HDAC4-211ENST00000494800 WNT8AQ9H1J5 351 aa20.11■□□□□ 0.81
HDAC4-211ENST00000494800 BCAS3Q9H6U6 928 aa20.11■□□□□ 0.81
HDAC4-211ENST00000494800 JPH1Q9HDC5 661 aaPredicted RBP20.11■□□□□ 0.81
HDAC4-211ENST00000494800 PFKFB2O60825 505 aa20.1■□□□□ 0.81
HDAC4-211ENST00000494800 ATP9AO75110 1047 aa20.1■□□□□ 0.81
HDAC4-211ENST00000494800 FGBP02675 491 aa20.1■□□□□ 0.81
HDAC4-211ENST00000494800 ACRP10323 421 aa20.1■□□□□ 0.81
HDAC4-211ENST00000494800 GNAT1P11488 350 aa20.1■□□□□ 0.81
HDAC4-211ENST00000494800 TCF7P36402 384 aaPredicted RBP20.1■□□□□ 0.81
HDAC4-211ENST00000494800 NEK4P51957 841 aa20.1■□□□□ 0.81
HDAC4-211ENST00000494800 AK2P54819 239 aa20.1■□□□□ 0.81
HDAC4-211ENST00000494800 TMEM240Q5SV17 173 aa20.1■□□□□ 0.81
HDAC4-211ENST00000494800 UTP14CQ5TAP6 766 aaKnown RBP20.1■□□□□ 0.81
HDAC4-211ENST00000494800 AFAP1L1Q8TED9 768 aa20.1■□□□□ 0.81
HDAC4-211ENST00000494800 C22orf23Q9BZE7 217 aa20.1■□□□□ 0.81
HDAC4-211ENST00000494800 TPCN1Q9ULQ1 816 aa20.1■□□□□ 0.81
HDAC4-211ENST00000494800 C17orf102A2RUQ5 167 aa20.09■□□□□ 0.81
HDAC4-211ENST00000494800 MEIS1O00470 390 aa20.09■□□□□ 0.81
HDAC4-211ENST00000494800 SEC24BO95487 1268 aa20.09■□□□□ 0.81
HDAC4-211ENST00000494800 CYP3A4P08684 503 aa20.09■□□□□ 0.81
HDAC4-211ENST00000494800 SMAD3P84022 425 aaKnown RBP20.09■□□□□ 0.81
HDAC4-211ENST00000494800 SETQ01105 290 aaPredicted RBP20.09■□□□□ 0.81
HDAC4-211ENST00000494800 SCRN1Q12765 414 aa20.09■□□□□ 0.81
HDAC4-211ENST00000494800 PTK7Q13308 1070 aa20.09■□□□□ 0.81
HDAC4-211ENST00000494800 GALNT17Q6IS24 598 aa20.09■□□□□ 0.81
HDAC4-211ENST00000494800 ZNF365Q70YC5 407 aa20.09■□□□□ 0.81
HDAC4-211ENST00000494800 SCLYQ96I15 445 aa20.09■□□□□ 0.81
HDAC4-211ENST00000494800 SLC9A2Q9UBY0 812 aa20.09■□□□□ 0.81
HDAC4-211ENST00000494800 NFASCO94856 1347 aa20.08■□□□□ 0.81
HDAC4-211ENST00000494800 MYH7BA7E2Y1 1941 aa20.08■□□□□ 0.81
HDAC4-211ENST00000494800 PARNO95453 639 aaKnown RBP20.08■□□□□ 0.81
HDAC4-211ENST00000494800 ACTN1P12814 892 aa20.08■□□□□ 0.81
HDAC4-211ENST00000494800 C16orf59Q7L2K0 433 aa20.08■□□□□ 0.81
HDAC4-211ENST00000494800 CYP2W1Q8TAV3 490 aa20.08■□□□□ 0.81
HDAC4-211ENST00000494800 WASF1Q92558 559 aa20.08■□□□□ 0.81
HDAC4-211ENST00000494800 GLG1Q92896 1179 aa20.08■□□□□ 0.81
HDAC4-211ENST00000494800 TNPO1Q92973 898 aaKnown RBP20.08■□□□□ 0.81
HDAC4-211ENST00000494800 AZI2Q9H6S1 392 aa20.08■□□□□ 0.81
HDAC4-211ENST00000494800 AGO4Q9HCK5 861 aaKnown RBP20.08■□□□□ 0.81
HDAC4-211ENST00000494800 ERAP1Q9NZ08 941 aa20.08■□□□□ 0.81
HDAC4-211ENST00000494800 TCEAL9Q9UHQ7 104 aa20.08■□□□□ 0.81
HDAC4-211ENST00000494800 PCDHA4Q9UN74 947 aa20.08■□□□□ 0.81
HDAC4-211ENST00000494800 STK36Q9NRP7 1315 aa20.07■□□□□ 0.8
HDAC4-211ENST00000494800 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.07■□□□□ 0.8
HDAC4-211ENST00000494800 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.07■□□□□ 0.8
HDAC4-211ENST00000494800 IQCF3P0C7M6 154 aa20.07■□□□□ 0.8
HDAC4-211ENST00000494800 SMIM10L2AP0DMW4 78 aa20.07■□□□□ 0.8
HDAC4-211ENST00000494800 SMIM10L2BP0DMW5 78 aa20.07■□□□□ 0.8
HDAC4-211ENST00000494800 PLA2G4DQ86XP0 818 aa20.07■□□□□ 0.8
HDAC4-211ENST00000494800 HERVK_113Q902F9 699 aa20.07■□□□□ 0.8
HDAC4-211ENST00000494800 ATP6V0A1Q93050 837 aa20.07■□□□□ 0.8
HDAC4-211ENST00000494800 SMARCAD1Q9H4L7 1026 aa20.07■□□□□ 0.8
HDAC4-211ENST00000494800 LAMA3Q16787 3333 aa20.06■□□□□ 0.8
HDAC4-211ENST00000494800 ARP10275 920 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms