RNA–Protein interactions for RNA: ENST00000494674.1

PRPF4B-209, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 1,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-209ENST00000494674 NPHP3-ACAD11A0A0J9YXS1 232 aa11.84□□□□□ -0.51
PRPF4B-209ENST00000494674 N4BP3O15049 544 aa11.84□□□□□ -0.51
PRPF4B-209ENST00000494674 NKRFO15226 690 aaKnown RBP eCLIP11.84□□□□□ -0.51
PRPF4B-209ENST00000494674 FLOT1O75955 427 aa11.84□□□□□ -0.51
PRPF4B-209ENST00000494674 IDEP14735 1019 aa11.84□□□□□ -0.51
PRPF4B-209ENST00000494674 FECHP22830 423 aa11.84□□□□□ -0.51
PRPF4B-209ENST00000494674 USP14P54578 494 aa11.84□□□□□ -0.51
PRPF4B-209ENST00000494674 RBL2Q08999 1139 aa11.84□□□□□ -0.51
PRPF4B-209ENST00000494674 PPP2R5CQ13362 524 aa11.84□□□□□ -0.51
PRPF4B-209ENST00000494674 ZCWPW2Q504Y3 356 aa11.84□□□□□ -0.51
PRPF4B-209ENST00000494674 NOL9Q5SY16 702 aaKnown RBP11.84□□□□□ -0.51
PRPF4B-209ENST00000494674 FOXR2Q6PJQ5 311 aa11.84□□□□□ -0.51
PRPF4B-209ENST00000494674 GPBP1Q86WP2 473 aa11.84□□□□□ -0.51
PRPF4B-209ENST00000494674 ZNF280CQ8ND82 737 aa11.84□□□□□ -0.51
PRPF4B-209ENST00000494674 REPS2Q8NFH8 660 aa11.84□□□□□ -0.51
PRPF4B-209ENST00000494674 ERMNQ8TAM6 284 aa11.84□□□□□ -0.51
PRPF4B-209ENST00000494674 PPP1R13BQ96KQ4 1090 aa11.84□□□□□ -0.51
PRPF4B-209ENST00000494674 HSD17B14Q9BPX1 270 aa11.84□□□□□ -0.51
PRPF4B-209ENST00000494674 EHMT1Q9H9B1 1298 aa11.84□□□□□ -0.51
PRPF4B-209ENST00000494674 RAVER2Q9HCJ3 691 aaKnown RBP11.84□□□□□ -0.51
PRPF4B-209ENST00000494674 TRMT1Q9NXH9 659 aaKnown RBP11.84□□□□□ -0.51
PRPF4B-209ENST00000494674 PITPNM2Q9BZ72 1349 aa11.84□□□□□ -0.51
PRPF4B-209ENST00000494674 RNF225M0QZC1 329 aaPredicted RBP11.83□□□□□ -0.52
PRPF4B-209ENST00000494674 MFAP3LO75121 409 aa11.83□□□□□ -0.52
PRPF4B-209ENST00000494674 ARP10275 920 aa11.83□□□□□ -0.52
PRPF4B-209ENST00000494674 ITGB5P18084 799 aa11.83□□□□□ -0.52
PRPF4B-209ENST00000494674 FXR1P51114 621 aaKnown RBP eCLIP11.83□□□□□ -0.52
PRPF4B-209ENST00000494674 LRCH2Q5VUJ6 765 aa11.83□□□□□ -0.52
PRPF4B-209ENST00000494674 LHX8Q68G74 356 aa11.83□□□□□ -0.52
PRPF4B-209ENST00000494674 LRRC55Q6ZSA7 311 aa11.83□□□□□ -0.52
PRPF4B-209ENST00000494674 SYT2Q8N9I0 419 aaPredicted RBP11.83□□□□□ -0.52
PRPF4B-209ENST00000494674 ATG4CQ96DT6 458 aa11.83□□□□□ -0.52
PRPF4B-209ENST00000494674 ZFP91Q96JP5 570 aaPredicted RBP11.83□□□□□ -0.52
PRPF4B-209ENST00000494674 CNOT6LQ96LI5 555 aaKnown RBP11.83□□□□□ -0.52
PRPF4B-209ENST00000494674 PRIMPOLQ96LW4 560 aa11.83□□□□□ -0.52
PRPF4B-209ENST00000494674 PANX2Q96RD6 677 aa11.83□□□□□ -0.52
PRPF4B-209ENST00000494674 EIF2AK1Q9BQI3 630 aaKnown RBP11.83□□□□□ -0.52
PRPF4B-209ENST00000494674 PANK4Q9NVE7 773 aa11.83□□□□□ -0.52
PRPF4B-209ENST00000494674 STK24Q9Y6E0 443 aa11.83□□□□□ -0.52
PRPF4B-209ENST00000494674 AKR1B15C9JRZ8 316 aaPredicted RBP11.83□□□□□ -0.52
PRPF4B-209ENST00000494674 VWA5AO00534 786 aa11.83□□□□□ -0.52
PRPF4B-209ENST00000494674 ARHGAP6O43182 974 aa11.83□□□□□ -0.52
PRPF4B-209ENST00000494674 STX10O60499 249 aa11.83□□□□□ -0.52
PRPF4B-209ENST00000494674 SSBP05455 408 aaKnown RBP eCLIP11.83□□□□□ -0.52
PRPF4B-209ENST00000494674 ALAS1P13196 640 aa11.83□□□□□ -0.52
PRPF4B-209ENST00000494674 TNNT1P13805 278 aa11.83□□□□□ -0.52
PRPF4B-209ENST00000494674 SETQ01105 290 aaPredicted RBP11.83□□□□□ -0.52
PRPF4B-209ENST00000494674 CYP4A11Q02928 519 aa11.83□□□□□ -0.52
PRPF4B-209ENST00000494674 LRRC41Q15345 812 aa11.83□□□□□ -0.52
PRPF4B-209ENST00000494674 MIIPQ5JXC2 388 aa11.83□□□□□ -0.52
PRPF4B-209ENST00000494674 FAM26FQ5R3K3 315 aa11.83□□□□□ -0.52
PRPF4B-209ENST00000494674 CPXCR1Q8N123 301 aa11.83□□□□□ -0.52
PRPF4B-209ENST00000494674 ANKRD20A12PQ8NF67 263 aa11.83□□□□□ -0.52
PRPF4B-209ENST00000494674 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.83□□□□□ -0.52
PRPF4B-209ENST00000494674 SYTL5Q8TDW5 730 aaPredicted RBP11.83□□□□□ -0.52
PRPF4B-209ENST00000494674 EEF2KMTQ96G04 330 aa11.83□□□□□ -0.52
PRPF4B-209ENST00000494674 BAG1Q99933 345 aaPredicted RBP11.83□□□□□ -0.52
PRPF4B-209ENST00000494674 MXRA8Q9BRK3 442 aa11.83□□□□□ -0.52
PRPF4B-209ENST00000494674 AS3MTQ9HBK9 375 aa11.83□□□□□ -0.52
PRPF4B-209ENST00000494674 RGL1Q9NZL6 768 aa11.83□□□□□ -0.52
PRPF4B-209ENST00000494674 ADAMTS5Q9UNA0 930 aa11.83□□□□□ -0.52
PRPF4B-209ENST00000494674 A0A1W2PQC6 194 aa11.82□□□□□ -0.52
PRPF4B-209ENST00000494674 NRDCO43847 1150 aa11.82□□□□□ -0.52
PRPF4B-209ENST00000494674 DDNO94850 711 aaPredicted RBP11.82□□□□□ -0.52
PRPF4B-209ENST00000494674 BCRP11274 1271 aa11.82□□□□□ -0.52
PRPF4B-209ENST00000494674 CASP14P31944 242 aa11.82□□□□□ -0.52
PRPF4B-209ENST00000494674 HMGCS2P54868 508 aa11.82□□□□□ -0.52
PRPF4B-209ENST00000494674 LRRC63Q05C16 580 aa11.82□□□□□ -0.52
PRPF4B-209ENST00000494674 PABPC4Q13310 644 aaKnown RBP eCLIP11.82□□□□□ -0.52
PRPF4B-209ENST00000494674 GIT2Q14161 759 aa11.82□□□□□ -0.52
PRPF4B-209ENST00000494674 MCF2L2Q86YR7 1114 aa11.82□□□□□ -0.52
PRPF4B-209ENST00000494674 MB21D1Q8N884 522 aa11.82□□□□□ -0.52
PRPF4B-209ENST00000494674 MYRIPQ8NFW9 859 aa11.82□□□□□ -0.52
PRPF4B-209ENST00000494674 TUBGCP2Q9BSJ2 902 aa11.82□□□□□ -0.52
PRPF4B-209ENST00000494674 UNC45AQ9H3U1 944 aa11.82□□□□□ -0.52
PRPF4B-209ENST00000494674 TUFT1Q9NNX1 390 aa11.82□□□□□ -0.52
PRPF4B-209ENST00000494674 PICK1Q9NRD5 415 aa11.82□□□□□ -0.52
PRPF4B-209ENST00000494674 RABGAP1Q9Y3P9 1069 aa11.82□□□□□ -0.52
PRPF4B-209ENST00000494674 ZHX2Q9Y6X8 837 aa11.82□□□□□ -0.52
PRPF4B-209ENST00000494674 DOCK5Q9H7D0 1870 aa11.82□□□□□ -0.52
PRPF4B-209ENST00000494674 SLITRK3O94933 977 aa11.81□□□□□ -0.52
PRPF4B-209ENST00000494674 EYA4O95677 639 aa11.81□□□□□ -0.52
PRPF4B-209ENST00000494674 TPM2P07951 284 aa11.81□□□□□ -0.52
PRPF4B-209ENST00000494674 FDX1P10109 184 aa11.81□□□□□ -0.52
PRPF4B-209ENST00000494674 YBX3P16989 372 aaKnown RBP eCLIP11.81□□□□□ -0.52
PRPF4B-209ENST00000494674 RPS6P62753 249 aaKnown RBP11.81□□□□□ -0.52
PRPF4B-209ENST00000494674 MRPS9P82933 396 aaKnown RBP11.81□□□□□ -0.52
PRPF4B-209ENST00000494674 UBXN1Q04323 297 aa11.81□□□□□ -0.52
PRPF4B-209ENST00000494674 PCNX4Q63HM2 1172 aa11.81□□□□□ -0.52
PRPF4B-209ENST00000494674 DLK2Q6UY11 383 aa11.81□□□□□ -0.52
PRPF4B-209ENST00000494674 NIPA1Q7RTP0 329 aa11.81□□□□□ -0.52
PRPF4B-209ENST00000494674 PPFIBP1Q86W92 1011 aa11.81□□□□□ -0.52
PRPF4B-209ENST00000494674 REXO1L1PQ8IX06 675 aa11.81□□□□□ -0.52
PRPF4B-209ENST00000494674 CCDC65Q8IXS2 484 aa11.81□□□□□ -0.52
PRPF4B-209ENST00000494674 MYOCDQ8IZQ8 938 aa11.81□□□□□ -0.52
PRPF4B-209ENST00000494674 KCTD17Q8N5Z5 321 aa11.81□□□□□ -0.52
PRPF4B-209ENST00000494674 SAMD3Q8N6K7 520 aa11.81□□□□□ -0.52
PRPF4B-209ENST00000494674 REEP2Q9BRK0 252 aa11.81□□□□□ -0.52
PRPF4B-209ENST00000494674 RUSC1Q9BVN2 902 aa11.81□□□□□ -0.52
PRPF4B-209ENST00000494674 HOMER2Q9NSB8 354 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms