RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 JAG1P78504 1218 aa12.41□□□□□ -0.42
CHMP3-209ENST00000494623 KCNMA1Q12791 1236 aa12.41□□□□□ -0.42
CHMP3-209ENST00000494623 POTEGQ6S5H5 508 aa12.41□□□□□ -0.42
CHMP3-209ENST00000494623 POTEEQ6S8J3 1075 aa12.41□□□□□ -0.42
CHMP3-209ENST00000494623 TMEM179Q6ZVK1 233 aa12.41□□□□□ -0.42
CHMP3-209ENST00000494623 FBXO11Q86XK2 927 aa12.41□□□□□ -0.42
CHMP3-209ENST00000494623 DRC1Q96MC2 740 aa12.41□□□□□ -0.42
CHMP3-209ENST00000494623 IFIH1Q9BYX4 1025 aaKnown RBP12.41□□□□□ -0.42
CHMP3-209ENST00000494623 NLRC4Q9NPP4 1024 aa12.41□□□□□ -0.42
CHMP3-209ENST00000494623 ABCB11O95342 1321 aa12.4□□□□□ -0.42
CHMP3-209ENST00000494623 CYP3A7-CYP3A51PA0A087WV96 503 aa12.4□□□□□ -0.42
CHMP3-209ENST00000494623 USO1O60763 962 aaKnown RBP12.4□□□□□ -0.42
CHMP3-209ENST00000494623 NDUFB10O96000 172 aa12.4□□□□□ -0.42
CHMP3-209ENST00000494623 GH2P01242 217 aa12.4□□□□□ -0.42
CHMP3-209ENST00000494623 CYP11B2P19099 503 aa12.4□□□□□ -0.42
CHMP3-209ENST00000494623 CYP3A7P24462 503 aa12.4□□□□□ -0.42
CHMP3-209ENST00000494623 CHRNA5P30532 468 aa12.4□□□□□ -0.42
CHMP3-209ENST00000494623 PSMC6P62333 389 aa12.4□□□□□ -0.42
CHMP3-209ENST00000494623 AOC3Q16853 763 aa12.4□□□□□ -0.42
CHMP3-209ENST00000494623 ZCWPW2Q504Y3 356 aa12.4□□□□□ -0.42
CHMP3-209ENST00000494623 HDXQ7Z353 690 aa12.4□□□□□ -0.42
CHMP3-209ENST00000494623 SLFN12Q8IYM2 578 aa12.4□□□□□ -0.42
CHMP3-209ENST00000494623 SPICE1Q8N0Z3 855 aa12.4□□□□□ -0.42
CHMP3-209ENST00000494623 CAGE1Q8TC20 777 aa12.4□□□□□ -0.42
CHMP3-209ENST00000494623 CRACR2AQ9BSW2 395 aa12.4□□□□□ -0.42
CHMP3-209ENST00000494623 UBXN6Q9BZV1 441 aa12.4□□□□□ -0.42
CHMP3-209ENST00000494623 EMILIN3Q9NT22 766 aa12.4□□□□□ -0.42
CHMP3-209ENST00000494623 SPDYE3A6NKU9 549 aa12.4□□□□□ -0.42
CHMP3-209ENST00000494623 MAP2K7O14733 419 aa12.4□□□□□ -0.42
CHMP3-209ENST00000494623 HMGB2P26583 209 aaKnown RBP12.4□□□□□ -0.42
CHMP3-209ENST00000494623 HOXA13P31271 388 aaPredicted RBP12.4□□□□□ -0.42
CHMP3-209ENST00000494623 CATSPER3Q86XQ3 398 aa12.4□□□□□ -0.42
CHMP3-209ENST00000494623 BAP1Q92560 729 aa12.4□□□□□ -0.42
CHMP3-209ENST00000494623 TSGA10Q9BZW7 698 aa12.4□□□□□ -0.42
CHMP3-209ENST00000494623 MLXIPQ9HAP2 919 aa12.4□□□□□ -0.42
CHMP3-209ENST00000494623 PCDHA2Q9Y5H9 948 aa12.4□□□□□ -0.42
CHMP3-209ENST00000494623 QSER1Q2KHR3 1735 aa12.39□□□□□ -0.43
CHMP3-209ENST00000494623 ERICH4A6NGS2 130 aa12.39□□□□□ -0.43
CHMP3-209ENST00000494623 MOCS3O95396 460 aa12.39□□□□□ -0.43
CHMP3-209ENST00000494623 HDLBPQ00341 1268 aaKnown RBP12.39□□□□□ -0.43
CHMP3-209ENST00000494623 PABPC4Q13310 644 aaKnown RBP eCLIP12.39□□□□□ -0.43
CHMP3-209ENST00000494623 ARSHQ5FYA8 562 aa12.39□□□□□ -0.43
CHMP3-209ENST00000494623 RBM26Q5T8P6 1007 aaKnown RBP12.39□□□□□ -0.43
CHMP3-209ENST00000494623 SYDE2Q5VT97 1194 aa12.39□□□□□ -0.43
CHMP3-209ENST00000494623 ANKRD13CQ8N6S4 541 aa12.39□□□□□ -0.43
CHMP3-209ENST00000494623 SCFD1Q8WVM8 642 aa12.39□□□□□ -0.43
CHMP3-209ENST00000494623 PRMT6Q96LA8 375 aaPredicted RBP12.39□□□□□ -0.43
CHMP3-209ENST00000494623 POLD4Q9HCU8 107 aa12.39□□□□□ -0.43
CHMP3-209ENST00000494623 L1RE1Q9UN81 338 aa12.39□□□□□ -0.43
CHMP3-209ENST00000494623 C10orf71Q711Q0 1435 aa12.39□□□□□ -0.43
CHMP3-209ENST00000494623 HOXA7P31268 230 aaPredicted RBP12.39□□□□□ -0.43
CHMP3-209ENST00000494623 MAGEA1P43355 309 aa12.39□□□□□ -0.43
CHMP3-209ENST00000494623 APBA1Q02410 837 aa12.39□□□□□ -0.43
CHMP3-209ENST00000494623 AP3B2Q13367 1082 aa12.39□□□□□ -0.43
CHMP3-209ENST00000494623 ADAM9Q13443 819 aa12.39□□□□□ -0.43
CHMP3-209ENST00000494623 RRP1BQ14684 758 aaKnown RBP12.39□□□□□ -0.43
CHMP3-209ENST00000494623 PDXDC1Q6P996 788 aa12.39□□□□□ -0.43
CHMP3-209ENST00000494623 PURBQ96QR8 312 aaKnown RBP12.39□□□□□ -0.43
CHMP3-209ENST00000494623 SERPINA10Q9UK55 444 aa12.39□□□□□ -0.43
CHMP3-209ENST00000494623 FAM86B1E9PN63 330 aa12.39□□□□□ -0.43
CHMP3-209ENST00000494623 FAM86B2P0C5J1 330 aa12.39□□□□□ -0.43
CHMP3-209ENST00000494623 BMP3P12645 472 aa12.39□□□□□ -0.43
CHMP3-209ENST00000494623 GYS2P54840 703 aa12.39□□□□□ -0.43
CHMP3-209ENST00000494623 SLC12A3P55017 1021 aa12.39□□□□□ -0.43
CHMP3-209ENST00000494623 GFPT1Q06210 699 aaPredicted RBP12.39□□□□□ -0.43
CHMP3-209ENST00000494623 FLAD1Q8NFF5 587 aa12.39□□□□□ -0.43
CHMP3-209ENST00000494623 CYP2W1Q8TAV3 490 aa12.39□□□□□ -0.43
CHMP3-209ENST00000494623 ETNPPLQ8TBG4 499 aa12.39□□□□□ -0.43
CHMP3-209ENST00000494623 MBOAT7Q96N66 472 aa12.39□□□□□ -0.43
CHMP3-209ENST00000494623 LSM14BQ9BX40 385 aaKnown RBP12.39□□□□□ -0.43
CHMP3-209ENST00000494623 PDE11AQ9HCR9 933 aa12.39□□□□□ -0.43
CHMP3-209ENST00000494623 DNM3Q9UQ16 869 aa12.39□□□□□ -0.43
CHMP3-209ENST00000494623 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.39□□□□□ -0.43
CHMP3-209ENST00000494623 CAPN6Q9Y6Q1 641 aa12.39□□□□□ -0.43
CHMP3-209ENST00000494623 A0A1W2PRG0 241 aa12.38□□□□□ -0.43
CHMP3-209ENST00000494623 PLSCR1O15162 318 aa12.38□□□□□ -0.43
CHMP3-209ENST00000494623 TACC1O75410 805 aa12.38□□□□□ -0.43
CHMP3-209ENST00000494623 ZNF76P36508 570 aa12.38□□□□□ -0.43
CHMP3-209ENST00000494623 USP14P54578 494 aa12.38□□□□□ -0.43
CHMP3-209ENST00000494623 FKBP1AP62942 108 aaKnown RBP12.38□□□□□ -0.43
CHMP3-209ENST00000494623 TDRD12Q587J7 1177 aaKnown RBP12.38□□□□□ -0.43
CHMP3-209ENST00000494623 HAUS3Q68CZ6 603 aa12.38□□□□□ -0.43
CHMP3-209ENST00000494623 GMCL1P1Q8NEA9 526 aa12.38□□□□□ -0.43
CHMP3-209ENST00000494623 CEP63Q96MT8 703 aa12.38□□□□□ -0.43
CHMP3-209ENST00000494623 GBP3Q9H0R5 595 aa12.38□□□□□ -0.43
CHMP3-209ENST00000494623 SH2D4AQ9H788 454 aa12.38□□□□□ -0.43
CHMP3-209ENST00000494623 H3BQF6 201 aa12.38□□□□□ -0.43
CHMP3-209ENST00000494623 PDE2AO00408 941 aaPredicted RBP12.38□□□□□ -0.43
CHMP3-209ENST00000494623 POLR2FP61218 127 aaKnown RBP12.38□□□□□ -0.43
CHMP3-209ENST00000494623 RASSF7Q02833 373 aa12.38□□□□□ -0.43
CHMP3-209ENST00000494623 CYP4A11Q02928 519 aa12.38□□□□□ -0.43
CHMP3-209ENST00000494623 CKAP4Q07065 602 aaKnown RBP12.38□□□□□ -0.43
CHMP3-209ENST00000494623 ERMNQ8TAM6 284 aa12.38□□□□□ -0.43
CHMP3-209ENST00000494623 CRYGNQ8WXF5 182 aa12.38□□□□□ -0.43
CHMP3-209ENST00000494623 GMCL1Q96IK5 515 aa12.38□□□□□ -0.43
CHMP3-209ENST00000494623 CSRNP1Q96S65 589 aa12.38□□□□□ -0.43
CHMP3-209ENST00000494623 KCTD10Q9H3F6 313 aa12.38□□□□□ -0.43
CHMP3-209ENST00000494623 BRWD3Q6RI45 1802 aa12.37□□□□□ -0.43
CHMP3-209ENST00000494623 ANO9A1A5B4 782 aa12.37□□□□□ -0.43
CHMP3-209ENST00000494623 ZMYND10O75800 440 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms