RNA–Protein interactions for RNA: ENST00000494571.1

ATG3-207, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 2,758 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-207ENST00000494571 CHGBP05060 677 aa4.4□□□□□ -1.7
ATG3-207ENST00000494571 COL6A2P12110 1019 aa4.4□□□□□ -1.7
ATG3-207ENST00000494571 MZF1P28698 734 aaPredicted RBP4.4□□□□□ -1.7
ATG3-207ENST00000494571 PTDSS1P48651 473 aaKnown RBP4.4□□□□□ -1.7
ATG3-207ENST00000494571 CD97P48960 835 aa4.4□□□□□ -1.7
ATG3-207ENST00000494571 STX17P56962 302 aa4.4□□□□□ -1.7
ATG3-207ENST00000494571 MAGOHP61326 146 aaKnown RBP4.4□□□□□ -1.7
ATG3-207ENST00000494571 CAMK2BQ13554 666 aa4.4□□□□□ -1.7
ATG3-207ENST00000494571 TWISTNBQ3B726 338 aaPredicted RBP4.4□□□□□ -1.7
ATG3-207ENST00000494571 ZFYVE27Q5T4F4 411 aa4.4□□□□□ -1.7
ATG3-207ENST00000494571 NUTM2DQ5VT03 806 aaPredicted RBP4.4□□□□□ -1.7
ATG3-207ENST00000494571 OTUD7BQ6GQQ9 843 aa4.4□□□□□ -1.7
ATG3-207ENST00000494571 PPP4R3AQ6IN85 833 aa4.4□□□□□ -1.7
ATG3-207ENST00000494571 IQCEQ6IPM2 695 aa4.4□□□□□ -1.7
ATG3-207ENST00000494571 C8orf74Q6P047 294 aa4.4□□□□□ -1.7
ATG3-207ENST00000494571 ISLR2Q6UXK2 745 aa4.4□□□□□ -1.7
ATG3-207ENST00000494571 CABP7Q86V35 215 aa4.4□□□□□ -1.7
ATG3-207ENST00000494571 APLFQ8IW19 511 aaPredicted RBP4.4□□□□□ -1.7
ATG3-207ENST00000494571 RETREG2Q8NC44 543 aa4.4□□□□□ -1.7
ATG3-207ENST00000494571 NSUN7Q8NE18 718 aaKnown RBP4.4□□□□□ -1.7
ATG3-207ENST00000494571 SUPT20HQ8NEM7 779 aa4.4□□□□□ -1.7
ATG3-207ENST00000494571 PRPF31Q8WWY3 499 aaKnown RBP4.4□□□□□ -1.7
ATG3-207ENST00000494571 RSPH1Q8WYR4 309 aa4.4□□□□□ -1.7
ATG3-207ENST00000494571 PTPRN2Q92932 1015 aa4.4□□□□□ -1.7
ATG3-207ENST00000494571 MAGOHBQ96A72 148 aaKnown RBP4.4□□□□□ -1.7
ATG3-207ENST00000494571 FERMT2Q96AC1 680 aa4.4□□□□□ -1.7
ATG3-207ENST00000494571 CHMP6Q96FZ7 201 aa4.4□□□□□ -1.7
ATG3-207ENST00000494571 NUP88Q99567 741 aaPredicted RBP4.4□□□□□ -1.7
ATG3-207ENST00000494571 SPATA16Q9BXB7 569 aa4.4□□□□□ -1.7
ATG3-207ENST00000494571 LSG1Q9H089 658 aaKnown RBP4.4□□□□□ -1.7
ATG3-207ENST00000494571 CCDC113Q9H0I3 377 aa4.4□□□□□ -1.7
ATG3-207ENST00000494571 GLT8D2Q9H1C3 349 aa4.4□□□□□ -1.7
ATG3-207ENST00000494571 SAMSN1Q9NSI8 373 aaKnown RBP4.4□□□□□ -1.7
ATG3-207ENST00000494571 CLIC5Q9NZA1 410 aa4.4□□□□□ -1.7
ATG3-207ENST00000494571 HSFX1Q9UBD0 423 aa4.4□□□□□ -1.7
ATG3-207ENST00000494571 CNOT8Q9UFF9 292 aaKnown RBP4.4□□□□□ -1.7
ATG3-207ENST00000494571 SLC12A4Q9UP95 1085 aa4.4□□□□□ -1.7
ATG3-207ENST00000494571 POLR3AO14802 1390 aaPredicted RBP4.4□□□□□ -1.7
ATG3-207ENST00000494571 NSD2O96028 1365 aa4.4□□□□□ -1.7
ATG3-207ENST00000494571 DAPK1P53355 1430 aa4.4□□□□□ -1.71
ATG3-207ENST00000494571 IQCA1LA6NCM1 817 aa4.4□□□□□ -1.71
ATG3-207ENST00000494571 F8W031 263 aaPredicted RBP4.4□□□□□ -1.71
ATG3-207ENST00000494571 TEX28O15482 410 aa4.4□□□□□ -1.71
ATG3-207ENST00000494571 MARCH6O60337 910 aa4.4□□□□□ -1.71
ATG3-207ENST00000494571 OPHN1O60890 802 aa4.4□□□□□ -1.71
ATG3-207ENST00000494571 S100BP04271 92 aaPredicted RBP4.4□□□□□ -1.71
ATG3-207ENST00000494571 GSTA2P09210 222 aa4.4□□□□□ -1.71
ATG3-207ENST00000494571 DRD4P21917 467 aa4.4□□□□□ -1.71
ATG3-207ENST00000494571 CCT6AP40227 531 aaKnown RBP4.4□□□□□ -1.71
ATG3-207ENST00000494571 GEMIN4P57678 1058 aaKnown RBP4.4□□□□□ -1.71
ATG3-207ENST00000494571 TBX2Q13207 712 aaPredicted RBP4.4□□□□□ -1.71
ATG3-207ENST00000494571 PRKG1Q13976 671 aa4.4□□□□□ -1.71
ATG3-207ENST00000494571 TNIP1Q15025 636 aa4.4□□□□□ -1.71
ATG3-207ENST00000494571 EMBQ6PCB8 327 aa4.4□□□□□ -1.71
ATG3-207ENST00000494571 BLOC1S2Q6QNY1 142 aa4.4□□□□□ -1.71
ATG3-207ENST00000494571 MYO1HQ8N1T3 1032 aa4.4□□□□□ -1.71
ATG3-207ENST00000494571 ANKK1Q8NFD2 765 aa4.4□□□□□ -1.71
ATG3-207ENST00000494571 DQX1Q8TE96 717 aaKnown RBP4.4□□□□□ -1.71
ATG3-207ENST00000494571 LZICQ8WZA0 190 aa4.4□□□□□ -1.71
ATG3-207ENST00000494571 P3H4Q92791 437 aa4.4□□□□□ -1.71
ATG3-207ENST00000494571 EIF2AQ9BY44 585 aaKnown RBP4.4□□□□□ -1.71
ATG3-207ENST00000494571 IRF2BPLQ9H1B7 796 aa4.4□□□□□ -1.71
ATG3-207ENST00000494571 TPK1Q9H3S4 243 aa4.4□□□□□ -1.71
ATG3-207ENST00000494571 PSTPIP2Q9H939 334 aa4.4□□□□□ -1.71
ATG3-207ENST00000494571 ETNK1Q9HBU6 452 aa4.4□□□□□ -1.71
ATG3-207ENST00000494571 EPB41L5Q9HCM4 733 aa4.4□□□□□ -1.71
ATG3-207ENST00000494571 BTBD7Q9P203 1132 aa4.4□□□□□ -1.71
ATG3-207ENST00000494571 HESX1Q9UBX0 185 aa4.4□□□□□ -1.71
ATG3-207ENST00000494571 RCOR1Q9UKL0 485 aa4.4□□□□□ -1.71
ATG3-207ENST00000494571 LZTS1Q9Y250 596 aa4.4□□□□□ -1.71
ATG3-207ENST00000494571 ABCC4O15439 1325 aa4.39□□□□□ -1.71
ATG3-207ENST00000494571 GOLGA8AA7E2F4 631 aa4.39□□□□□ -1.71
ATG3-207ENST00000494571 GNAT3A8MTJ3 354 aa4.39□□□□□ -1.71
ATG3-207ENST00000494571 ABLIM1O14639 778 aa4.39□□□□□ -1.71
ATG3-207ENST00000494571 DNAJC6O75061 913 aa4.39□□□□□ -1.71
ATG3-207ENST00000494571 RARAP10276 462 aa4.39□□□□□ -1.71
ATG3-207ENST00000494571 SKIP12755 728 aa4.39□□□□□ -1.71
ATG3-207ENST00000494571 EEF2P13639 858 aaKnown RBP4.39□□□□□ -1.71
ATG3-207ENST00000494571 ALADP13716 330 aa4.39□□□□□ -1.71
ATG3-207ENST00000494571 CDC27P30260 824 aa4.39□□□□□ -1.71
ATG3-207ENST00000494571 CTNNA1P35221 906 aaKnown RBP4.39□□□□□ -1.71
ATG3-207ENST00000494571 SLC16A2P36021 539 aa4.39□□□□□ -1.71
ATG3-207ENST00000494571 FXR1P51114 621 aaKnown RBP eCLIP4.39□□□□□ -1.71
ATG3-207ENST00000494571 RTP1P59025 263 aa4.39□□□□□ -1.71
ATG3-207ENST00000494571 PPP2R2AP63151 447 aa4.39□□□□□ -1.71
ATG3-207ENST00000494571 RASSF7Q02833 373 aa4.39□□□□□ -1.71
ATG3-207ENST00000494571 KIF5AQ12840 1032 aa4.39□□□□□ -1.71
ATG3-207ENST00000494571 LSAMPQ13449 338 aa4.39□□□□□ -1.71
ATG3-207ENST00000494571 KIF22Q14807 665 aa4.39□□□□□ -1.71
ATG3-207ENST00000494571 TRADDQ15628 312 aa4.39□□□□□ -1.71
ATG3-207ENST00000494571 WDR78Q5VTH9 848 aa4.39□□□□□ -1.71
ATG3-207ENST00000494571 KAZNQ674X7 775 aa4.39□□□□□ -1.71
ATG3-207ENST00000494571 IRGCQ6NXR0 463 aa4.39□□□□□ -1.71
ATG3-207ENST00000494571 PRR23CQ6ZRP0 262 aa4.39□□□□□ -1.71
ATG3-207ENST00000494571 RASGRP2Q7LDG7 609 aa4.39□□□□□ -1.71
ATG3-207ENST00000494571 BPHLQ86WA6 291 aaPredicted RBP4.39□□□□□ -1.71
ATG3-207ENST00000494571 LRRC34Q8IZ02 419 aa4.39□□□□□ -1.71
ATG3-207ENST00000494571 GABPB2Q8TAK5 448 aaPredicted RBP4.39□□□□□ -1.71
ATG3-207ENST00000494571 TTC8Q8TAM2 541 aa4.39□□□□□ -1.71
ATG3-207ENST00000494571 DTX3LQ8TDB6 740 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms