RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 ACRP10323 421 aa15.1■□□□□ 0.01
ERCC3-209ENST00000494464 SCG2P13521 617 aa15.1■□□□□ 0.01
ERCC3-209ENST00000494464 RFC2P35250 354 aa15.1■□□□□ 0.01
ERCC3-209ENST00000494464 AP3B2Q13367 1082 aa15.1■□□□□ 0.01
ERCC3-209ENST00000494464 PTGISQ16647 500 aa15.1■□□□□ 0.01
ERCC3-209ENST00000494464 ZNF697Q5TEC3 545 aa15.1■□□□□ 0.01
ERCC3-209ENST00000494464 ZNF365Q70YC5 407 aa15.1■□□□□ 0.01
ERCC3-209ENST00000494464 CYFIP1Q7L576 1253 aa15.1■□□□□ 0.01
ERCC3-209ENST00000494464 RPUSD2Q8IZ73 545 aaKnown RBP15.1■□□□□ 0.01
ERCC3-209ENST00000494464 CCDC155Q8N6L0 562 aa15.1■□□□□ 0.01
ERCC3-209ENST00000494464 C7orf31Q8N865 590 aa15.1■□□□□ 0.01
ERCC3-209ENST00000494464 MTIF3Q9H2K0 278 aaKnown RBP15.1■□□□□ 0.01
ERCC3-209ENST00000494464 HDAC6Q9UBN7 1215 aa15.1■□□□□ 0.01
ERCC3-209ENST00000494464 CYP46A1Q9Y6A2 500 aa15.1■□□□□ 0.01
ERCC3-209ENST00000494464 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.09■□□□□ 0.01
ERCC3-209ENST00000494464 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.09■□□□□ 0.01
ERCC3-209ENST00000494464 SMCO2A6NFE2 343 aa15.09■□□□□ 0.01
ERCC3-209ENST00000494464 MAFGO15525 162 aa15.09■□□□□ 0.01
ERCC3-209ENST00000494464 SORBS3O60504 671 aa15.09■□□□□ 0.01
ERCC3-209ENST00000494464 LGALS2P05162 132 aa15.09■□□□□ 0.01
ERCC3-209ENST00000494464 KCNA2P16389 499 aa15.09■□□□□ 0.01
ERCC3-209ENST00000494464 ITGB5P18084 799 aa15.09■□□□□ 0.01
ERCC3-209ENST00000494464 CLK2P49760 499 aaKnown RBP15.09■□□□□ 0.01
ERCC3-209ENST00000494464 CHMP4BP1P59074 171 aa15.09■□□□□ 0.01
ERCC3-209ENST00000494464 MTMR1Q13613 665 aa15.09■□□□□ 0.01
ERCC3-209ENST00000494464 TOB2Q14106 344 aaPredicted RBP15.09■□□□□ 0.01
ERCC3-209ENST00000494464 RABEP1Q15276 862 aa15.09■□□□□ 0.01
ERCC3-209ENST00000494464 NTRK3Q16288 839 aa15.09■□□□□ 0.01
ERCC3-209ENST00000494464 HSCBQ8IWL3 235 aa15.09■□□□□ 0.01
ERCC3-209ENST00000494464 AFAP1L1Q8TED9 768 aa15.09■□□□□ 0.01
ERCC3-209ENST00000494464 CCDC12Q8WUD4 166 aaPredicted RBP15.09■□□□□ 0.01
ERCC3-209ENST00000494464 VWCEQ96DN2 955 aa15.09■□□□□ 0.01
ERCC3-209ENST00000494464 IL17RAQ96F46 866 aa15.09■□□□□ 0.01
ERCC3-209ENST00000494464 SCLYQ96I15 445 aa15.09■□□□□ 0.01
ERCC3-209ENST00000494464 GPR20Q99678 358 aa15.09■□□□□ 0.01
ERCC3-209ENST00000494464 ALG1Q9BT22 464 aa15.09■□□□□ 0.01
ERCC3-209ENST00000494464 RNF26Q9BY78 433 aaPredicted RBP15.09■□□□□ 0.01
ERCC3-209ENST00000494464 ANO3Q9BYT9 981 aa15.09■□□□□ 0.01
ERCC3-209ENST00000494464 BCAS3Q9H6U6 928 aa15.09■□□□□ 0.01
ERCC3-209ENST00000494464 H3BRB1 525 aa15.08■□□□□ 0
ERCC3-209ENST00000494464 PRPF3O43395 683 aaKnown RBP15.08■□□□□ 0
ERCC3-209ENST00000494464 FGBP02675 491 aa15.08■□□□□ 0
ERCC3-209ENST00000494464 IQCF3P0C7M6 154 aa15.08■□□□□ 0
ERCC3-209ENST00000494464 IFNAR1P17181 557 aa15.08■□□□□ 0
ERCC3-209ENST00000494464 PDIA3P30101 505 aaKnown RBP15.08■□□□□ 0
ERCC3-209ENST00000494464 HOXC8P31273 242 aa15.08■□□□□ 0
ERCC3-209ENST00000494464 SREBF1P36956 1147 aa15.08■□□□□ 0
ERCC3-209ENST00000494464 RETREG2Q8NC44 543 aa15.08■□□□□ 0
ERCC3-209ENST00000494464 ZMYND12Q9H0C1 365 aa15.08■□□□□ 0
ERCC3-209ENST00000494464 TUT1Q9H6E5 874 aaKnown RBP15.08■□□□□ 0
ERCC3-209ENST00000494464 JADE2Q9NQC1 790 aa15.08■□□□□ 0
ERCC3-209ENST00000494464 GBF1Q92538 1859 aa15.08■□□□□ 0
ERCC3-209ENST00000494464 TRIP12Q14669 1992 aaPredicted RBP15.07■□□□□ 0
ERCC3-209ENST00000494464 ANAPC15P60006 121 aa15.07■□□□□ 0
ERCC3-209ENST00000494464 PTK7Q13308 1070 aa15.07■□□□□ 0
ERCC3-209ENST00000494464 PKN1Q16512 942 aa15.07■□□□□ 0
ERCC3-209ENST00000494464 MCTP2Q6DN12 878 aa15.07■□□□□ 0
ERCC3-209ENST00000494464 IL27Q8NEV9 243 aa15.07■□□□□ 0
ERCC3-209ENST00000494464 DHX38Q92620 1227 aaKnown RBP15.07■□□□□ 0
ERCC3-209ENST00000494464 UPF3BQ9BZI7 483 aaKnown RBP15.07■□□□□ 0
ERCC3-209ENST00000494464 STXBP5LQ9Y2K9 1186 aa15.07■□□□□ 0
ERCC3-209ENST00000494464 COL6A3P12111 3177 aa15.07■□□□□ 0
ERCC3-209ENST00000494464 CDH23Q9H251 3354 aa15.06■□□□□ 0
ERCC3-209ENST00000494464 ATP9AO75110 1047 aa15.06■□□□□ 0
ERCC3-209ENST00000494464 PARNO95453 639 aaKnown RBP15.06■□□□□ 0
ERCC3-209ENST00000494464 DNAJB2P25686 324 aa15.06■□□□□ 0
ERCC3-209ENST00000494464 AKAP17AQ02040 695 aaKnown RBP15.06■□□□□ 0
ERCC3-209ENST00000494464 PHKBQ93100 1093 aa15.06■□□□□ 0
ERCC3-209ENST00000494464 ZNF274Q96GC6 653 aaPredicted RBP15.06■□□□□ 0
ERCC3-209ENST00000494464 PGBD1Q96JS3 809 aa15.06■□□□□ 0
ERCC3-209ENST00000494464 GUCD1Q96NT3 240 aa15.06■□□□□ 0
ERCC3-209ENST00000494464 MXRA8Q9BRK3 442 aa15.06■□□□□ 0
ERCC3-209ENST00000494464 CXXC1Q9P0U4 656 aaPredicted RBP15.06■□□□□ 0
ERCC3-209ENST00000494464 ZNF215Q9UL58 517 aaPredicted RBP15.06■□□□□ 0
ERCC3-209ENST00000494464 SELPP16109 830 aa15.05■□□□□ -0
ERCC3-209ENST00000494464 TRIM71Q2Q1W2 868 aaKnown RBP15.05■□□□□ -0
ERCC3-209ENST00000494464 CEP55Q53EZ4 464 aa15.05■□□□□ -0
ERCC3-209ENST00000494464 LRRC8DQ7L1W4 858 aa15.05■□□□□ -0
ERCC3-209ENST00000494464 OTOP2Q7RTS6 562 aa15.05■□□□□ -0
ERCC3-209ENST00000494464 CCDC148Q8NFR7 591 aa15.05■□□□□ -0
ERCC3-209ENST00000494464 CRYGNQ8WXF5 182 aa15.05■□□□□ -0
ERCC3-209ENST00000494464 TTYH1Q9H313 450 aaPredicted RBP15.05■□□□□ -0
ERCC3-209ENST00000494464 NCOA5Q9HCD5 579 aaKnown RBP15.05■□□□□ -0
ERCC3-209ENST00000494464 C6orf50Q9HD87 102 aa15.05■□□□□ -0
ERCC3-209ENST00000494464 KCNH7Q9NS40 1196 aa15.05■□□□□ -0
ERCC3-209ENST00000494464 NFASCO94856 1347 aa15.04■□□□□ -0
ERCC3-209ENST00000494464 EMSYQ7Z589 1322 aa15.04■□□□□ -0
ERCC3-209ENST00000494464 C17orf102A2RUQ5 167 aa15.04■□□□□ -0
ERCC3-209ENST00000494464 SMIM10L2AP0DMW4 78 aa15.04■□□□□ -0
ERCC3-209ENST00000494464 SMIM10L2BP0DMW5 78 aa15.04■□□□□ -0
ERCC3-209ENST00000494464 CKBP12277 381 aa15.04■□□□□ -0
ERCC3-209ENST00000494464 ACTN1P12814 892 aa15.04■□□□□ -0
ERCC3-209ENST00000494464 GNA11P29992 359 aa15.04■□□□□ -0
ERCC3-209ENST00000494464 TCF7P36402 384 aaPredicted RBP15.04■□□□□ -0
ERCC3-209ENST00000494464 CCT2P78371 535 aaKnown RBP15.04■□□□□ -0
ERCC3-209ENST00000494464 ARHGAP4P98171 946 aa15.04■□□□□ -0
ERCC3-209ENST00000494464 SP4Q02446 784 aa15.04■□□□□ -0
ERCC3-209ENST00000494464 HIC1Q14526 733 aa15.04■□□□□ -0
ERCC3-209ENST00000494464 NIPA1Q7RTP0 329 aa15.04■□□□□ -0
ERCC3-209ENST00000494464 DEFB128Q7Z7B8 93 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms