RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 PGM5Q15124 567 aa7.62□□□□□ -1.19
MSH5-217ENST00000494458 EPHA7Q15375 998 aa7.62□□□□□ -1.19
MSH5-217ENST00000494458 CDKAL1Q5VV42 579 aa7.62□□□□□ -1.19
MSH5-217ENST00000494458 SV2BQ7L1I2 683 aa7.62□□□□□ -1.19
MSH5-217ENST00000494458 FASTKD5Q7L8L6 764 aaKnown RBP7.62□□□□□ -1.19
MSH5-217ENST00000494458 APTXQ7Z2E3 356 aaKnown RBP7.62□□□□□ -1.19
MSH5-217ENST00000494458 FCHSD1Q86WN1 690 aa7.62□□□□□ -1.19
MSH5-217ENST00000494458 ADSSL1Q8N142 457 aa7.62□□□□□ -1.19
MSH5-217ENST00000494458 AOPEPQ8N6M6 819 aa7.62□□□□□ -1.19
MSH5-217ENST00000494458 SYT2Q8N9I0 419 aaPredicted RBP7.62□□□□□ -1.19
MSH5-217ENST00000494458 DNERQ8NFT8 737 aa7.62□□□□□ -1.19
MSH5-217ENST00000494458 LARP4BQ92615 738 aaKnown RBP7.62□□□□□ -1.19
MSH5-217ENST00000494458 INPP4AQ96PE3 977 aaPredicted RBP7.62□□□□□ -1.19
MSH5-217ENST00000494458 TAAR1Q96RJ0 339 aa7.62□□□□□ -1.19
MSH5-217ENST00000494458 SENP7Q9BQF6 1050 aa7.62□□□□□ -1.19
MSH5-217ENST00000494458 LRRC27Q9C0I9 530 aa7.62□□□□□ -1.19
MSH5-217ENST00000494458 TUFT1Q9NNX1 390 aa7.62□□□□□ -1.19
MSH5-217ENST00000494458 PXMP2Q9NR77 195 aa7.62□□□□□ -1.19
MSH5-217ENST00000494458 CYP39A1Q9NYL5 469 aa7.62□□□□□ -1.19
MSH5-217ENST00000494458 BTBD7Q9P203 1132 aa7.62□□□□□ -1.19
MSH5-217ENST00000494458 PCDHA2Q9Y5H9 948 aa7.62□□□□□ -1.19
MSH5-217ENST00000494458 DNAJC25-GNG10A0A024R161 153 aa7.61□□□□□ -1.19
MSH5-217ENST00000494458 LOC102724159A0A0B4J2E5 919 aa7.61□□□□□ -1.19
MSH5-217ENST00000494458 TESPA1A2RU30 521 aaPredicted RBP7.61□□□□□ -1.19
MSH5-217ENST00000494458 IPO5O00410 1097 aaKnown RBP7.61□□□□□ -1.19
MSH5-217ENST00000494458 EML1O00423 815 aa7.61□□□□□ -1.19
MSH5-217ENST00000494458 MED24O75448 989 aa7.61□□□□□ -1.19
MSH5-217ENST00000494458 RGS20O76081 388 aa7.61□□□□□ -1.19
MSH5-217ENST00000494458 ITGBL1O95965 494 aaPredicted RBP7.61□□□□□ -1.19
MSH5-217ENST00000494458 EDNRBP24530 442 aa7.61□□□□□ -1.19
MSH5-217ENST00000494458 ICAM3P32942 547 aa7.61□□□□□ -1.19
MSH5-217ENST00000494458 PPP1R2P41236 205 aa7.61□□□□□ -1.19
MSH5-217ENST00000494458 BAATQ14032 418 aaPredicted RBP7.61□□□□□ -1.19
MSH5-217ENST00000494458 PWP2Q15269 919 aaKnown RBP7.61□□□□□ -1.19
MSH5-217ENST00000494458 ZRSR1Q15695 479 aaKnown RBP7.61□□□□□ -1.19
MSH5-217ENST00000494458 KMT5BQ4FZB7 885 aa7.61□□□□□ -1.19
MSH5-217ENST00000494458 ARSHQ5FYA8 562 aa7.61□□□□□ -1.19
MSH5-217ENST00000494458 SPATA1Q5VX52 437 aa7.61□□□□□ -1.19
MSH5-217ENST00000494458 HAUS3Q68CZ6 603 aa7.61□□□□□ -1.19
MSH5-217ENST00000494458 SNRNP48Q6IEG0 339 aaKnown RBP7.61□□□□□ -1.19
MSH5-217ENST00000494458 RNF207Q6ZRF8 634 aa7.61□□□□□ -1.19
MSH5-217ENST00000494458 MOB2Q70IA6 237 aa7.61□□□□□ -1.19
MSH5-217ENST00000494458 UNC13DQ70J99 1090 aa7.61□□□□□ -1.19
MSH5-217ENST00000494458 CPXCR1Q8N123 301 aa7.61□□□□□ -1.19
MSH5-217ENST00000494458 IL31RAQ8NI17 732 aa7.61□□□□□ -1.19
MSH5-217ENST00000494458 NEK9Q8TD19 979 aa7.61□□□□□ -1.19
MSH5-217ENST00000494458 MORC4Q8TE76 937 aa7.61□□□□□ -1.19
MSH5-217ENST00000494458 SNX29Q8TEQ0 813 aa7.61□□□□□ -1.19
MSH5-217ENST00000494458 STAMQ92783 540 aa7.61□□□□□ -1.19
MSH5-217ENST00000494458 GJA10Q969M2 543 aa7.61□□□□□ -1.19
MSH5-217ENST00000494458 GPRASP2Q96D09 838 aa7.61□□□□□ -1.19
MSH5-217ENST00000494458 IWS1Q96ST2 819 aa7.61□□□□□ -1.19
MSH5-217ENST00000494458 WDR11Q9BZH6 1224 aa7.61□□□□□ -1.19
MSH5-217ENST00000494458 ASCC2Q9H1I8 757 aaPredicted RBP7.61□□□□□ -1.19
MSH5-217ENST00000494458 BLZF1Q9H2G9 400 aa7.61□□□□□ -1.19
MSH5-217ENST00000494458 ACAD9Q9H845 621 aa7.61□□□□□ -1.19
MSH5-217ENST00000494458 ELP3Q9H9T3 547 aa7.61□□□□□ -1.19
MSH5-217ENST00000494458 AGO4Q9HCK5 861 aaKnown RBP7.61□□□□□ -1.19
MSH5-217ENST00000494458 A1CFQ9NQ94 594 aaKnown RBP7.61□□□□□ -1.19
MSH5-217ENST00000494458 KCNH7Q9NS40 1196 aa7.61□□□□□ -1.19
MSH5-217ENST00000494458 RNF146Q9NTX7 359 aa7.61□□□□□ -1.19
MSH5-217ENST00000494458 TBC1D22BQ9NU19 505 aa7.61□□□□□ -1.19
MSH5-217ENST00000494458 RBPJLQ9UBG7 517 aa7.61□□□□□ -1.19
MSH5-217ENST00000494458 FBXO40Q9UH90 709 aa7.61□□□□□ -1.19
MSH5-217ENST00000494458 RWDD2AQ9UIY3 292 aa7.61□□□□□ -1.19
MSH5-217ENST00000494458 ASTN1O14525 1302 aa7.6□□□□□ -1.19
MSH5-217ENST00000494458 NFASCO94856 1347 aa7.6□□□□□ -1.19
MSH5-217ENST00000494458 BECN2A8MW95 431 aa7.6□□□□□ -1.19
MSH5-217ENST00000494458 SPATA31C2B4DYI2 1134 aa7.6□□□□□ -1.19
MSH5-217ENST00000494458 GOLGA6L19H0YKK7 550 aa7.6□□□□□ -1.19
MSH5-217ENST00000494458 SOCS7O14512 581 aa7.6□□□□□ -1.19
MSH5-217ENST00000494458 EYA4O95677 639 aa7.6□□□□□ -1.19
MSH5-217ENST00000494458 SLC25A27O95847 323 aa7.6□□□□□ -1.19
MSH5-217ENST00000494458 NR3C2P08235 984 aa7.6□□□□□ -1.19
MSH5-217ENST00000494458 CYP11B2P19099 503 aa7.6□□□□□ -1.19
MSH5-217ENST00000494458 COPB2P35606 906 aa7.6□□□□□ -1.19
MSH5-217ENST00000494458 ZNF76P36508 570 aa7.6□□□□□ -1.19
MSH5-217ENST00000494458 CCT6AP40227 531 aaKnown RBP7.6□□□□□ -1.19
MSH5-217ENST00000494458 PRCPP42785 496 aa7.6□□□□□ -1.19
MSH5-217ENST00000494458 HERVK_113P62684 666 aa7.6□□□□□ -1.19
MSH5-217ENST00000494458 PABPC4Q13310 644 aaKnown RBP eCLIP7.6□□□□□ -1.19
MSH5-217ENST00000494458 ITGB3BPQ13352 177 aaPredicted RBP7.6□□□□□ -1.19
MSH5-217ENST00000494458 SNAPC2Q13487 334 aa7.6□□□□□ -1.19
MSH5-217ENST00000494458 PRKG1Q13976 671 aa7.6□□□□□ -1.19
MSH5-217ENST00000494458 MCM6Q14566 821 aa7.6□□□□□ -1.19
MSH5-217ENST00000494458 ISM2Q6H9L7 571 aa7.6□□□□□ -1.19
MSH5-217ENST00000494458 CENPPQ6IPU0 288 aa7.6□□□□□ -1.19
MSH5-217ENST00000494458 SLC30A10Q6XR72 485 aa7.6□□□□□ -1.19
MSH5-217ENST00000494458 PDCD7Q8N8D1 485 aaKnown RBP7.6□□□□□ -1.19
MSH5-217ENST00000494458 FAM133AQ8N9E0 248 aa7.6□□□□□ -1.19
MSH5-217ENST00000494458 SHCBP1Q8NEM2 672 aa7.6□□□□□ -1.19
MSH5-217ENST00000494458 RDM1Q8NG50 284 aa7.6□□□□□ -1.19
MSH5-217ENST00000494458 ERMNQ8TAM6 284 aa7.6□□□□□ -1.19
MSH5-217ENST00000494458 NSUN6Q8TEA1 469 aaKnown RBP7.6□□□□□ -1.19
MSH5-217ENST00000494458 GTF3C2Q8WUA4 911 aaPredicted RBP7.6□□□□□ -1.19
MSH5-217ENST00000494458 OPTNQ96CV9 577 aa7.6□□□□□ -1.19
MSH5-217ENST00000494458 DHTKD1Q96HY7 919 aaPredicted RBP7.6□□□□□ -1.19
MSH5-217ENST00000494458 RMDN3Q96TC7 470 aa7.6□□□□□ -1.19
MSH5-217ENST00000494458 EIF2AK1Q9BQI3 630 aaKnown RBP7.6□□□□□ -1.19
MSH5-217ENST00000494458 SPATC1LQ9H0A9 340 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms