RNA–Protein interactions for RNA: ENST00000494396.5

SYP-208, Transcript of synaptophysin, humanhuman

TSL 2

Gene SYP, Length 2,062 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYP-208ENST00000494396 CCDC17Q96LX7 622 aa18.34■□□□□ 0.53
SYP-208ENST00000494396 MAGEF1Q9HAY2 307 aa18.34■□□□□ 0.53
SYP-208ENST00000494396 MTMR7Q9Y216 660 aa18.34■□□□□ 0.53
SYP-208ENST00000494396 BICDL2A1A5D9 508 aa18.33■□□□□ 0.52
SYP-208ENST00000494396 DDTLA6NHG4 134 aaPredicted RBP18.33■□□□□ 0.52
SYP-208ENST00000494396 SPDYE2BA6NHP3 402 aa18.33■□□□□ 0.52
SYP-208ENST00000494396 WNT7AO00755 349 aa18.33■□□□□ 0.52
SYP-208ENST00000494396 CYTH3O43739 400 aa18.33■□□□□ 0.52
SYP-208ENST00000494396 ZMYND10O75800 440 aa18.33■□□□□ 0.52
SYP-208ENST00000494396 LCA5LO95447 670 aa18.33■□□□□ 0.52
SYP-208ENST00000494396 SPDYE6P0CI01 402 aa18.33■□□□□ 0.52
SYP-208ENST00000494396 RDXP35241 583 aaKnown RBP18.33■□□□□ 0.52
SYP-208ENST00000494396 SMTNP53814 917 aa18.33■□□□□ 0.52
SYP-208ENST00000494396 FBXW10Q5XX13 1052 aa18.33■□□□□ 0.52
SYP-208ENST00000494396 EIF1ADQ8N9N8 165 aaKnown RBP18.33■□□□□ 0.52
SYP-208ENST00000494396 AGBL3Q8NEM8 1001 aa18.33■□□□□ 0.52
SYP-208ENST00000494396 JDP2Q8WYK2 163 aa18.33■□□□□ 0.52
SYP-208ENST00000494396 ERGIC2Q96RQ1 377 aa18.33■□□□□ 0.52
SYP-208ENST00000494396 LACRTQ9GZZ8 138 aa18.33■□□□□ 0.52
SYP-208ENST00000494396 TMOD2Q9NZR1 351 aa18.33■□□□□ 0.52
SYP-208ENST00000494396 DLGAP5Q15398 846 aa18.32■□□□□ 0.52
SYP-208ENST00000494396 TAX1BP1Q86VP1 789 aa18.32■□□□□ 0.52
SYP-208ENST00000494396 GPKOWQ92917 476 aaPredicted RBP eCLIP18.32■□□□□ 0.52
SYP-208ENST00000494396 CCDC42Q96M95 316 aa18.32■□□□□ 0.52
SYP-208ENST00000494396 GDAP1L1Q96MZ0 367 aa18.32■□□□□ 0.52
SYP-208ENST00000494396 SH2D4AQ9H788 454 aa18.32■□□□□ 0.52
SYP-208ENST00000494396 ATRNL1Q5VV63 1379 aa18.32■□□□□ 0.52
SYP-208ENST00000494396 BRCA1P38398 1863 aaKnown RBP18.32■□□□□ 0.52
SYP-208ENST00000494396 TTLL1O95922 423 aa18.32■□□□□ 0.52
SYP-208ENST00000494396 NAP1L1P55209 391 aaKnown RBP18.32■□□□□ 0.52
SYP-208ENST00000494396 NEDD9Q14511 834 aa18.32■□□□□ 0.52
SYP-208ENST00000494396 ZNF174Q15697 407 aa18.32■□□□□ 0.52
SYP-208ENST00000494396 CCDC181Q5TID7 509 aa18.32■□□□□ 0.52
SYP-208ENST00000494396 PIK3AP1Q6ZUJ8 805 aa18.32■□□□□ 0.52
SYP-208ENST00000494396 ARHGAP27Q6ZUM4 889 aa18.32■□□□□ 0.52
SYP-208ENST00000494396 SH3BP5LQ7L8J4 393 aa18.32■□□□□ 0.52
SYP-208ENST00000494396 BLIDQ8IZY5 108 aa18.32■□□□□ 0.52
SYP-208ENST00000494396 ARFGAP2Q8N6H7 521 aa18.32■□□□□ 0.52
SYP-208ENST00000494396 LRRC1Q9BTT6 524 aa18.32■□□□□ 0.52
SYP-208ENST00000494396 BLZF1Q9H2G9 400 aa18.32■□□□□ 0.52
SYP-208ENST00000494396 ACTR5Q9H9F9 607 aaPredicted RBP18.32■□□□□ 0.52
SYP-208ENST00000494396 PCDHA4Q9UN74 947 aa18.32■□□□□ 0.52
SYP-208ENST00000494396 ZBTB12Q9Y330 459 aaPredicted RBP18.32■□□□□ 0.52
SYP-208ENST00000494396 HMGB1P1B2RPK0 211 aaPredicted RBP18.31■□□□□ 0.52
SYP-208ENST00000494396 KLRF2D3W0D1 207 aa18.31■□□□□ 0.52
SYP-208ENST00000494396 MPHOSPH10O00566 681 aaKnown RBP18.31■□□□□ 0.52
SYP-208ENST00000494396 ADAMTS3O15072 1205 aa18.31■□□□□ 0.52
SYP-208ENST00000494396 RHOBTB3O94955 611 aa18.31■□□□□ 0.52
SYP-208ENST00000494396 PAK2Q13177 524 aa18.31■□□□□ 0.52
SYP-208ENST00000494396 TTMPQ5BVD1 217 aa18.31■□□□□ 0.52
SYP-208ENST00000494396 GSPT2Q8IYD1 628 aaKnown RBP18.31■□□□□ 0.52
SYP-208ENST00000494396 IQCKQ8N0W5 287 aa18.31■□□□□ 0.52
SYP-208ENST00000494396 MTRQ99707 1265 aa18.31■□□□□ 0.52
SYP-208ENST00000494396 SPZ1Q9BXG8 430 aa18.31■□□□□ 0.52
SYP-208ENST00000494396 CUEDC2Q9H467 287 aa18.31■□□□□ 0.52
SYP-208ENST00000494396 DNAJC18Q9H819 358 aa18.31■□□□□ 0.52
SYP-208ENST00000494396 COL2A1P02458 1487 aaPredicted RBP18.31■□□□□ 0.52
SYP-208ENST00000494396 ZNF185O15231 689 aa18.3■□□□□ 0.52
SYP-208ENST00000494396 GOLGA8HP0CJ92 632 aa18.3■□□□□ 0.52
SYP-208ENST00000494396 HOXA7P31268 230 aaPredicted RBP18.3■□□□□ 0.52
SYP-208ENST00000494396 LSP1P33241 339 aa18.3■□□□□ 0.52
SYP-208ENST00000494396 CXCL9Q07325 125 aa18.3■□□□□ 0.52
SYP-208ENST00000494396 TYW1BQ6NUM6 668 aa18.3■□□□□ 0.52
SYP-208ENST00000494396 C8orf74Q6P047 294 aa18.3■□□□□ 0.52
SYP-208ENST00000494396 RNF10Q8N5U6 811 aaKnown RBP18.3■□□□□ 0.52
SYP-208ENST00000494396 MAGEC3Q8TD91 643 aa18.3■□□□□ 0.52
SYP-208ENST00000494396 CCDC47Q96A33 483 aaKnown RBP18.3■□□□□ 0.52
SYP-208ENST00000494396 TRIM47Q96LD4 638 aa18.3■□□□□ 0.52
SYP-208ENST00000494396 OSBPL9Q96SU4 736 aa18.3■□□□□ 0.52
SYP-208ENST00000494396 TUBGCP2Q9BSJ2 902 aa18.3■□□□□ 0.52
SYP-208ENST00000494396 VCPKMTQ9H867 229 aa18.3■□□□□ 0.52
SYP-208ENST00000494396 DMGDHQ9UI17 866 aaKnown RBP18.3■□□□□ 0.52
SYP-208ENST00000494396 PLAGL2Q9UPG8 496 aa18.3■□□□□ 0.52
SYP-208ENST00000494396 BCS1LQ9Y276 419 aa18.3■□□□□ 0.52
SYP-208ENST00000494396 NFKBIEO00221 500 aa18.3■□□□□ 0.52
SYP-208ENST00000494396 PPP1R37O75864 691 aa18.3■□□□□ 0.52
SYP-208ENST00000494396 PTGER2P43116 358 aa18.3■□□□□ 0.52
SYP-208ENST00000494396 CFAP58Q5T655 872 aa18.3■□□□□ 0.52
SYP-208ENST00000494396 PPP4R3AQ6IN85 833 aa18.3■□□□□ 0.52
SYP-208ENST00000494396 GIMAP8Q8ND71 665 aaPredicted RBP18.3■□□□□ 0.52
SYP-208ENST00000494396 WHAMMQ8TF30 809 aa18.3■□□□□ 0.52
SYP-208ENST00000494396 IFIH1Q9BYX4 1025 aaKnown RBP18.3■□□□□ 0.52
SYP-208ENST00000494396 BARHL2Q9NY43 387 aa18.3■□□□□ 0.52
SYP-208ENST00000494396 FER1L6Q2WGJ9 1857 aa18.3■□□□□ 0.52
SYP-208ENST00000494396 GOLGA6L7A0A1B0GV03 622 aa18.29■□□□□ 0.52
SYP-208ENST00000494396 RCCD1A6NED2 376 aa18.29■□□□□ 0.52
SYP-208ENST00000494396 PJA2O43164 708 aa18.29■□□□□ 0.52
SYP-208ENST00000494396 SMARCA1P28370 1054 aa18.29■□□□□ 0.52
SYP-208ENST00000494396 STAT6P42226 847 aa18.29■□□□□ 0.52
SYP-208ENST00000494396 ACTN3Q08043 901 aaPredicted RBP18.29■□□□□ 0.52
SYP-208ENST00000494396 TBC1D8BQ0IIM8 1120 aa18.29■□□□□ 0.52
SYP-208ENST00000494396 SKIDA1Q1XH10 827 aa18.29■□□□□ 0.52
SYP-208ENST00000494396 CERKLQ49MI3 558 aaPredicted RBP18.29■□□□□ 0.52
SYP-208ENST00000494396 HAUS3Q68CZ6 603 aa18.29■□□□□ 0.52
SYP-208ENST00000494396 CIAPIN1Q6FI81 312 aa18.29■□□□□ 0.52
SYP-208ENST00000494396 TTI2Q6NXR4 508 aa18.29■□□□□ 0.52
SYP-208ENST00000494396 USP17L2Q6R6M4 530 aa18.29■□□□□ 0.52
SYP-208ENST00000494396 ARMC9Q7Z3E5 817 aa18.29■□□□□ 0.52
SYP-208ENST00000494396 DAGLBQ8NCG7 672 aa18.29■□□□□ 0.52
SYP-208ENST00000494396 P3H4Q92791 437 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms