RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 LARGE1O95461 756 aa10.08□□□□□ -0.8
ITGB1-217ENST00000494395 SCG2P13521 617 aa10.08□□□□□ -0.8
ITGB1-217ENST00000494395 RBM25P49756 843 aaKnown RBP10.08□□□□□ -0.8
ITGB1-217ENST00000494395 MRPS9P82933 396 aaKnown RBP10.08□□□□□ -0.8
ITGB1-217ENST00000494395 KCNA10Q16322 511 aa10.08□□□□□ -0.8
ITGB1-217ENST00000494395 PRPF38BQ5VTL8 546 aaKnown RBP10.08□□□□□ -0.8
ITGB1-217ENST00000494395 C1orf53Q5VUE5 145 aa10.08□□□□□ -0.8
ITGB1-217ENST00000494395 SLC39A5Q6ZMH5 540 aa10.08□□□□□ -0.8
ITGB1-217ENST00000494395 FCHSD1Q86WN1 690 aa10.08□□□□□ -0.8
ITGB1-217ENST00000494395 TEX2Q8IWB9 1127 aa10.08□□□□□ -0.8
ITGB1-217ENST00000494395 SCFD2Q8WU76 684 aa10.08□□□□□ -0.8
ITGB1-217ENST00000494395 COPS5Q92905 334 aa10.08□□□□□ -0.8
ITGB1-217ENST00000494395 PHKBQ93100 1093 aa10.08□□□□□ -0.8
ITGB1-217ENST00000494395 MPHOSPH6Q99547 160 aaKnown RBP10.08□□□□□ -0.8
ITGB1-217ENST00000494395 RNF26Q9BY78 433 aaPredicted RBP10.08□□□□□ -0.8
ITGB1-217ENST00000494395 SENP6Q9GZR1 1112 aaPredicted RBP10.08□□□□□ -0.8
ITGB1-217ENST00000494395 PSTPIP2Q9H939 334 aa10.08□□□□□ -0.8
ITGB1-217ENST00000494395 RIC8AQ9NPQ8 531 aa10.08□□□□□ -0.8
ITGB1-217ENST00000494395 TPCN1Q9ULQ1 816 aa10.08□□□□□ -0.8
ITGB1-217ENST00000494395 ESYT2A0FGR8 921 aa10.07□□□□□ -0.8
ITGB1-217ENST00000494395 ADAMTS3O15072 1205 aa10.07□□□□□ -0.8
ITGB1-217ENST00000494395 NKRFO15226 690 aaKnown RBP eCLIP10.07□□□□□ -0.8
ITGB1-217ENST00000494395 EIF3JO75822 258 aaKnown RBP10.07□□□□□ -0.8
ITGB1-217ENST00000494395 C6orf222P0C671 652 aaPredicted RBP10.07□□□□□ -0.8
ITGB1-217ENST00000494395 CCND2P30279 289 aa10.07□□□□□ -0.8
ITGB1-217ENST00000494395 ACLYP53396 1101 aa10.07□□□□□ -0.8
ITGB1-217ENST00000494395 NAPAP54920 295 aa10.07□□□□□ -0.8
ITGB1-217ENST00000494395 BEX3Q00994 111 aa10.07□□□□□ -0.8
ITGB1-217ENST00000494395 SCRN1Q12765 414 aa10.07□□□□□ -0.8
ITGB1-217ENST00000494395 SEMA3FQ13275 785 aa10.07□□□□□ -0.8
ITGB1-217ENST00000494395 UBE2SQ16763 222 aa10.07□□□□□ -0.8
ITGB1-217ENST00000494395 TMEM259Q4ZIN3 620 aa10.07□□□□□ -0.8
ITGB1-217ENST00000494395 PCNX4Q63HM2 1172 aa10.07□□□□□ -0.8
ITGB1-217ENST00000494395 BANK1Q8NDB2 785 aa10.07□□□□□ -0.8
ITGB1-217ENST00000494395 INPP4AQ96PE3 977 aaPredicted RBP10.07□□□□□ -0.8
ITGB1-217ENST00000494395 DYNC1LI2O43237 492 aaPredicted RBP10.06□□□□□ -0.8
ITGB1-217ENST00000494395 PFKFB2O60825 505 aa10.06□□□□□ -0.8
ITGB1-217ENST00000494395 PPFIA3O75145 1194 aa10.06□□□□□ -0.8
ITGB1-217ENST00000494395 CTDNEP1O95476 244 aa10.06□□□□□ -0.8
ITGB1-217ENST00000494395 ASGR1P07306 291 aa10.06□□□□□ -0.8
ITGB1-217ENST00000494395 CFHP08603 1231 aa10.06□□□□□ -0.8
ITGB1-217ENST00000494395 TXNP10599 105 aaKnown RBP10.06□□□□□ -0.8
ITGB1-217ENST00000494395 MYCLP12524 364 aaPredicted RBP10.06□□□□□ -0.8
ITGB1-217ENST00000494395 NEK4P51957 841 aa10.06□□□□□ -0.8
ITGB1-217ENST00000494395 RTP1P59025 263 aa10.06□□□□□ -0.8
ITGB1-217ENST00000494395 GUCA2AQ02747 115 aa10.06□□□□□ -0.8
ITGB1-217ENST00000494395 ARHGAP1Q07960 439 aa10.06□□□□□ -0.8
ITGB1-217ENST00000494395 ST3GAL1Q11201 340 aa10.06□□□□□ -0.8
ITGB1-217ENST00000494395 STK3Q13188 491 aa10.06□□□□□ -0.8
ITGB1-217ENST00000494395 TTLL4Q14679 1199 aa10.06□□□□□ -0.8
ITGB1-217ENST00000494395 ANKRD1Q15327 319 aa10.06□□□□□ -0.8
ITGB1-217ENST00000494395 FSCN1Q16658 493 aaKnown RBP10.06□□□□□ -0.8
ITGB1-217ENST00000494395 ME3Q16798 604 aa10.06□□□□□ -0.8
ITGB1-217ENST00000494395 LY6KQ17RY6 165 aa10.06□□□□□ -0.8
ITGB1-217ENST00000494395 GNASQ5JWF2 1037 aa10.06□□□□□ -0.8
ITGB1-217ENST00000494395 SEPT14Q6ZU15 432 aa10.06□□□□□ -0.8
ITGB1-217ENST00000494395 PCSK9Q8NBP7 692 aaKnown RBP10.06□□□□□ -0.8
ITGB1-217ENST00000494395 SMARCC2Q8TAQ2 1214 aa10.06□□□□□ -0.8
ITGB1-217ENST00000494395 DPF3Q92784 378 aa10.06□□□□□ -0.8
ITGB1-217ENST00000494395 CUL5Q93034 780 aa10.06□□□□□ -0.8
ITGB1-217ENST00000494395 HLA-CQ95604 372 aa10.06□□□□□ -0.8
ITGB1-217ENST00000494395 FERMT2Q96AC1 680 aa10.06□□□□□ -0.8
ITGB1-217ENST00000494395 C22orf23Q9BZE7 217 aa10.06□□□□□ -0.8
ITGB1-217ENST00000494395 ZMYND12Q9H0C1 365 aa10.06□□□□□ -0.8
ITGB1-217ENST00000494395 SPC25Q9HBM1 224 aa10.06□□□□□ -0.8
ITGB1-217ENST00000494395 DDX41Q9UJV9 622 aaKnown RBP10.06□□□□□ -0.8
ITGB1-217ENST00000494395 ELP1O95163 1332 aa10.06□□□□□ -0.8
ITGB1-217ENST00000494395 SMCO2A6NFE2 343 aa10.05□□□□□ -0.8
ITGB1-217ENST00000494395 A6NJR5 290 aa10.05□□□□□ -0.8
ITGB1-217ENST00000494395 H0YGN5 161 aa10.05□□□□□ -0.8
ITGB1-217ENST00000494395 STAM2O75886 525 aa10.05□□□□□ -0.8
ITGB1-217ENST00000494395 ICAM3P32942 547 aa10.05□□□□□ -0.8
ITGB1-217ENST00000494395 CDK7P50613 346 aa10.05□□□□□ -0.8
ITGB1-217ENST00000494395 ADCY7P51828 1080 aa10.05□□□□□ -0.8
ITGB1-217ENST00000494395 SP2Q02086 613 aa10.05□□□□□ -0.8
ITGB1-217ENST00000494395 NPY5RQ15761 445 aa10.05□□□□□ -0.8
ITGB1-217ENST00000494395 XRRA1Q6P2D8 792 aa10.05□□□□□ -0.8
ITGB1-217ENST00000494395 NOL8Q76FK4 1167 aaKnown RBP10.05□□□□□ -0.8
ITGB1-217ENST00000494395 C7orf61Q8IZ16 206 aa10.05□□□□□ -0.8
ITGB1-217ENST00000494395 SLC43A3Q8NBI5 491 aa10.05□□□□□ -0.8
ITGB1-217ENST00000494395 OR6J1Q8NGC5 347 aa10.05□□□□□ -0.8
ITGB1-217ENST00000494395 CRYGNQ8WXF5 182 aa10.05□□□□□ -0.8
ITGB1-217ENST00000494395 EMID1Q96A84 441 aaPredicted RBP10.05□□□□□ -0.8
ITGB1-217ENST00000494395 SLC26A6Q9BXS9 759 aa10.05□□□□□ -0.8
ITGB1-217ENST00000494395 AP5M1Q9H0R1 490 aa10.05□□□□□ -0.8
ITGB1-217ENST00000494395 PCDHGC3Q9UN70 934 aa10.05□□□□□ -0.8
ITGB1-217ENST00000494395 PCDHA6Q9UN73 950 aa10.05□□□□□ -0.8
ITGB1-217ENST00000494395 PCDHA8Q9Y5H6 950 aa10.05□□□□□ -0.8
ITGB1-217ENST00000494395 GRIN2DO15399 1336 aa10.05□□□□□ -0.8
ITGB1-217ENST00000494395 STK36Q9NRP7 1315 aa10.05□□□□□ -0.8
ITGB1-217ENST00000494395 SPATA31C2B4DYI2 1134 aa10.04□□□□□ -0.8
ITGB1-217ENST00000494395 HRO43593 1189 aa10.04□□□□□ -0.8
ITGB1-217ENST00000494395 FOSP01100 380 aaPredicted RBP10.04□□□□□ -0.8
ITGB1-217ENST00000494395 GH1P01241 217 aa10.04□□□□□ -0.8
ITGB1-217ENST00000494395 TGFB3P10600 412 aa10.04□□□□□ -0.8
ITGB1-217ENST00000494395 HOXD8P13378 290 aaPredicted RBP10.04□□□□□ -0.8
ITGB1-217ENST00000494395 UBA1P22314 1058 aaKnown RBP10.04□□□□□ -0.8
ITGB1-217ENST00000494395 SREBF1P36956 1147 aa10.04□□□□□ -0.8
ITGB1-217ENST00000494395 PURAQ00577 322 aaKnown RBP10.04□□□□□ -0.8
ITGB1-217ENST00000494395 SSRP1Q08945 709 aaKnown RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms