RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 TNFRSF25Q93038 417 aa14.17□□□□□ -0.14
TRA2A-209ENST00000494255 FOXP1Q9H334 677 aaPredicted RBP14.17□□□□□ -0.14
TRA2A-209ENST00000494255 DOCK5Q9H7D0 1870 aa14.16□□□□□ -0.14
TRA2A-209ENST00000494255 ELP1O95163 1332 aa14.16□□□□□ -0.14
TRA2A-209ENST00000494255 IGLV3-22A0A075B6J6 115 aa14.16□□□□□ -0.14
TRA2A-209ENST00000494255 ATP9AO75110 1047 aa14.16□□□□□ -0.14
TRA2A-209ENST00000494255 ATN1P54259 1190 aaPredicted RBP14.16□□□□□ -0.14
TRA2A-209ENST00000494255 SP4Q02446 784 aa14.16□□□□□ -0.14
TRA2A-209ENST00000494255 LETM2Q2VYF4 491 aa14.16□□□□□ -0.14
TRA2A-209ENST00000494255 MOXD1Q6UVY6 613 aa14.16□□□□□ -0.14
TRA2A-209ENST00000494255 CXCL17Q6UXB2 119 aa14.16□□□□□ -0.14
TRA2A-209ENST00000494255 ZNF577Q9BSK1 485 aa14.16□□□□□ -0.14
TRA2A-209ENST00000494255 MTG1Q9BT17 334 aaPredicted RBP14.16□□□□□ -0.14
TRA2A-209ENST00000494255 AGO4Q9HCK5 861 aaKnown RBP14.16□□□□□ -0.14
TRA2A-209ENST00000494255 TCEAL9Q9UHQ7 104 aa14.16□□□□□ -0.14
TRA2A-209ENST00000494255 NFASCO94856 1347 aa14.15□□□□□ -0.14
TRA2A-209ENST00000494255 GCFC2P16383 781 aaKnown RBP14.15□□□□□ -0.14
TRA2A-209ENST00000494255 PDCP20941 246 aa14.15□□□□□ -0.14
TRA2A-209ENST00000494255 PURAQ00577 322 aaKnown RBP14.15□□□□□ -0.14
TRA2A-209ENST00000494255 HSDL1Q3SXM5 330 aa14.15□□□□□ -0.14
TRA2A-209ENST00000494255 LARP1BQ659C4 914 aaKnown RBP14.15□□□□□ -0.14
TRA2A-209ENST00000494255 MCTP1Q6DN14 999 aa14.15□□□□□ -0.14
TRA2A-209ENST00000494255 SLC39A5Q6ZMH5 540 aa14.15□□□□□ -0.14
TRA2A-209ENST00000494255 CYP3A7-CYP3A51PA0A087WV96 503 aa14.14□□□□□ -0.15
TRA2A-209ENST00000494255 A0A0U1RQG5 324 aaPredicted RBP14.14□□□□□ -0.15
TRA2A-209ENST00000494255 FAM205CA6NFA0 338 aa14.14□□□□□ -0.15
TRA2A-209ENST00000494255 IPO5O00410 1097 aaKnown RBP14.14□□□□□ -0.15
TRA2A-209ENST00000494255 CCNT1O60563 726 aaKnown RBP14.14□□□□□ -0.15
TRA2A-209ENST00000494255 PPFIA4O75335 1185 aa14.14□□□□□ -0.15
TRA2A-209ENST00000494255 TDP2O95551 362 aa14.14□□□□□ -0.15
TRA2A-209ENST00000494255 CYP3A7P24462 503 aa14.14□□□□□ -0.15
TRA2A-209ENST00000494255 Q4G0T1 1027 aa14.14□□□□□ -0.15
TRA2A-209ENST00000494255 EARS2Q5JPH6 523 aaKnown RBP14.14□□□□□ -0.15
TRA2A-209ENST00000494255 DPF3Q92784 378 aa14.14□□□□□ -0.15
TRA2A-209ENST00000494255 BCAS3Q9H6U6 928 aa14.14□□□□□ -0.15
TRA2A-209ENST00000494255 JPH1Q9HDC5 661 aaPredicted RBP14.14□□□□□ -0.15
TRA2A-209ENST00000494255 TBC1D22BQ9NU19 505 aa14.14□□□□□ -0.15
TRA2A-209ENST00000494255 FOXD4L1Q9NU39 408 aa14.14□□□□□ -0.15
TRA2A-209ENST00000494255 SLC9A2Q9UBY0 812 aa14.14□□□□□ -0.15
TRA2A-209ENST00000494255 DDX25Q9UHL0 483 aaKnown RBP14.14□□□□□ -0.15
TRA2A-209ENST00000494255 EDIL3O43854 480 aa14.14□□□□□ -0.15
TRA2A-209ENST00000494255 LRRC26Q2I0M4 334 aa14.14□□□□□ -0.15
TRA2A-209ENST00000494255 PPP4R3AQ6IN85 833 aa14.14□□□□□ -0.15
TRA2A-209ENST00000494255 NOSTRINQ8IVI9 506 aa14.14□□□□□ -0.15
TRA2A-209ENST00000494255 LENG9Q96B70 501 aa14.14□□□□□ -0.15
TRA2A-209ENST00000494255 GPR20Q99678 358 aa14.14□□□□□ -0.15
TRA2A-209ENST00000494255 DDX39AO00148 427 aaKnown RBP14.13□□□□□ -0.15
TRA2A-209ENST00000494255 EVI5O60447 810 aa14.13□□□□□ -0.15
TRA2A-209ENST00000494255 HOXD8P13378 290 aaPredicted RBP14.13□□□□□ -0.15
TRA2A-209ENST00000494255 RTP1P59025 263 aa14.13□□□□□ -0.15
TRA2A-209ENST00000494255 ITGB3BPQ13352 177 aaPredicted RBP14.13□□□□□ -0.15
TRA2A-209ENST00000494255 SEPT1Q8WYJ6 367 aa14.13□□□□□ -0.15
TRA2A-209ENST00000494255 MBOAT7Q96N66 472 aa14.13□□□□□ -0.15
TRA2A-209ENST00000494255 UIMC1Q96RL1 719 aa14.13□□□□□ -0.15
TRA2A-209ENST00000494255 KATNAL1Q9BW62 490 aa14.13□□□□□ -0.15
TRA2A-209ENST00000494255 SEZ6LQ9BYH1 1024 aa14.13□□□□□ -0.15
TRA2A-209ENST00000494255 NOL7Q9UMY1 257 aaKnown RBP14.13□□□□□ -0.15
TRA2A-209ENST00000494255 ATP11BQ9Y2G3 1177 aa14.13□□□□□ -0.15
TRA2A-209ENST00000494255 ARVCFO00192 962 aa14.12□□□□□ -0.15
TRA2A-209ENST00000494255 MSH4O15457 936 aa14.12□□□□□ -0.15
TRA2A-209ENST00000494255 MARCH6O60337 910 aa14.12□□□□□ -0.15
TRA2A-209ENST00000494255 ZNF286BP0CG31 522 aa14.12□□□□□ -0.15
TRA2A-209ENST00000494255 U2AF2P26368 475 aaKnown RBP eCLIP14.12□□□□□ -0.154e-7■■□□□ 11.5
TRA2A-209ENST00000494255 CHMP4BP1P59074 171 aa14.12□□□□□ -0.15
TRA2A-209ENST00000494255 PSMC6P62333 389 aa14.12□□□□□ -0.15
TRA2A-209ENST00000494255 ITGA7Q13683 1181 aa14.12□□□□□ -0.15
TRA2A-209ENST00000494255 SNX17Q15036 470 aa14.12□□□□□ -0.15
TRA2A-209ENST00000494255 C1orf53Q5VUE5 145 aa14.12□□□□□ -0.15
TRA2A-209ENST00000494255 RIT2Q99578 217 aa14.12□□□□□ -0.15
TRA2A-209ENST00000494255 TEKT3Q9BXF9 490 aa14.12□□□□□ -0.15
TRA2A-209ENST00000494255 MROH7Q68CQ1 1323 aa14.11□□□□□ -0.15
TRA2A-209ENST00000494255 KIF28PB7ZC32 967 aa14.11□□□□□ -0.15
TRA2A-209ENST00000494255 SLC37A4O43826 429 aa14.11□□□□□ -0.15
TRA2A-209ENST00000494255 GAS7O60861 476 aa14.11□□□□□ -0.15
TRA2A-209ENST00000494255 BAG4O95429 457 aaKnown RBP14.11□□□□□ -0.15
TRA2A-209ENST00000494255 LGALS2P05162 132 aa14.11□□□□□ -0.15
TRA2A-209ENST00000494255 ATP2B1P20020 1258 aa14.11□□□□□ -0.15
TRA2A-209ENST00000494255 TCF7P36402 384 aaPredicted RBP14.11□□□□□ -0.15
TRA2A-209ENST00000494255 ACTR2P61160 394 aa14.11□□□□□ -0.15
TRA2A-209ENST00000494255 KRT76Q01546 638 aa14.11□□□□□ -0.15
TRA2A-209ENST00000494255 BECN1Q14457 450 aa14.11□□□□□ -0.15
TRA2A-209ENST00000494255 TRIM60Q495X7 471 aa14.11□□□□□ -0.15
TRA2A-209ENST00000494255 UTP14CQ5TAP6 766 aaKnown RBP14.11□□□□□ -0.15
TRA2A-209ENST00000494255 LRCH2Q5VUJ6 765 aa14.11□□□□□ -0.15
TRA2A-209ENST00000494255 C7orf61Q8IZ16 206 aa14.11□□□□□ -0.15
TRA2A-209ENST00000494255 SLC5A5Q92911 643 aa14.11□□□□□ -0.15
TRA2A-209ENST00000494255 ZNF215Q9UL58 517 aaPredicted RBP14.11□□□□□ -0.15
TRA2A-209ENST00000494255 NR2E3Q9Y5X4 410 aa14.11□□□□□ -0.15
TRA2A-209ENST00000494255 ALPK3Q96L96 1907 aa14.11□□□□□ -0.15
TRA2A-209ENST00000494255 VPS37CA5D8V6 355 aaPredicted RBP14.1□□□□□ -0.15
TRA2A-209ENST00000494255 DCDC2CA8MYV0 355 aa14.1□□□□□ -0.15
TRA2A-209ENST00000494255 DHX15O43143 795 aaKnown RBP14.1□□□□□ -0.15
TRA2A-209ENST00000494255 F2P00734 622 aa14.1□□□□□ -0.15
TRA2A-209ENST00000494255 TRAPPC10P48553 1259 aa14.1□□□□□ -0.15
TRA2A-209ENST00000494255 PSEN2P49810 448 aa14.1□□□□□ -0.15
TRA2A-209ENST00000494255 FAM20AQ96MK3 541 aa14.1□□□□□ -0.15
TRA2A-209ENST00000494255 AZI2Q9H6S1 392 aa14.1□□□□□ -0.15
TRA2A-209ENST00000494255 SCN10AQ9Y5Y9 1956 aa14.1□□□□□ -0.15
TRA2A-209ENST00000494255 GSTTP1A0A1W2PQM5 241 aa14.1□□□□□ -0.15
TRA2A-209ENST00000494255 H3BRB1 525 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms