RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 FRMPD3Q5JV73 1810 aa14.25□□□□□ -0.13
VPS52-220ENST00000493674 EIF3JO75822 258 aaKnown RBP14.24□□□□□ -0.13
VPS52-220ENST00000493674 PGK2P07205 417 aa14.24□□□□□ -0.13
VPS52-220ENST00000493674 STXBP2Q15833 593 aa14.24□□□□□ -0.13
VPS52-220ENST00000493674 CAMK4Q16566 473 aa14.24□□□□□ -0.13
VPS52-220ENST00000493674 LRCH2Q5VUJ6 765 aa14.24□□□□□ -0.13
VPS52-220ENST00000493674 LRSAM1Q6UWE0 723 aa14.24□□□□□ -0.13
VPS52-220ENST00000493674 PDILTQ8N807 584 aa14.24□□□□□ -0.13
VPS52-220ENST00000493674 IQUBQ8NA54 791 aa14.24□□□□□ -0.13
VPS52-220ENST00000493674 CUEDC2Q9H467 287 aa14.24□□□□□ -0.13
VPS52-220ENST00000493674 MAGEF1Q9HAY2 307 aa14.24□□□□□ -0.13
VPS52-220ENST00000493674 ZFYVE28Q9HCC9 887 aa14.24□□□□□ -0.13
VPS52-220ENST00000493674 PRDM10Q9NQV6 1147 aa14.24□□□□□ -0.13
VPS52-220ENST00000493674 CPA4Q9UI42 421 aa14.24□□□□□ -0.13
VPS52-220ENST00000493674 STK24Q9Y6E0 443 aa14.24□□□□□ -0.13
VPS52-220ENST00000493674 KAT6AQ92794 2004 aa14.24□□□□□ -0.13
VPS52-220ENST00000493674 NFASCO94856 1347 aa14.23□□□□□ -0.13
VPS52-220ENST00000493674 KDM3AQ9Y4C1 1321 aa14.23□□□□□ -0.13
VPS52-220ENST00000493674 SLC15A5A6NIM6 579 aa14.23□□□□□ -0.13
VPS52-220ENST00000493674 SPATA31C2B4DYI2 1134 aa14.23□□□□□ -0.13
VPS52-220ENST00000493674 MARCH6O60337 910 aa14.23□□□□□ -0.13
VPS52-220ENST00000493674 GAS7O60861 476 aa14.23□□□□□ -0.13
VPS52-220ENST00000493674 COBLO75128 1261 aa14.23□□□□□ -0.13
VPS52-220ENST00000493674 HSPA8P11142 646 aaKnown RBP14.23□□□□□ -0.13
VPS52-220ENST00000493674 KCNA2P16389 499 aa14.23□□□□□ -0.13
VPS52-220ENST00000493674 PLCG1P19174 1290 aa14.23□□□□□ -0.13
VPS52-220ENST00000493674 ADORA2AP29274 412 aa14.23□□□□□ -0.13
VPS52-220ENST00000493674 MORN1Q5T089 497 aa14.23□□□□□ -0.13
VPS52-220ENST00000493674 KANK3Q6NY19 840 aa14.23□□□□□ -0.13
VPS52-220ENST00000493674 PLEKHH3Q7Z736 793 aa14.23□□□□□ -0.13
VPS52-220ENST00000493674 NLRX1Q86UT6 975 aa14.23□□□□□ -0.13
VPS52-220ENST00000493674 CNNM3Q8NE01 707 aa14.23□□□□□ -0.13
VPS52-220ENST00000493674 SPATA20Q8TB22 786 aa14.23□□□□□ -0.13
VPS52-220ENST00000493674 SNX29Q8TEQ0 813 aa14.23□□□□□ -0.13
VPS52-220ENST00000493674 DHX58Q96C10 678 aa14.23□□□□□ -0.13
VPS52-220ENST00000493674 CDHR1Q96JP9 859 aa14.23□□□□□ -0.13
VPS52-220ENST00000493674 TEKT3Q9BXF9 490 aa14.23□□□□□ -0.13
VPS52-220ENST00000493674 UNC45AQ9H3U1 944 aa14.23□□□□□ -0.13
VPS52-220ENST00000493674 TBC1D22BQ9NU19 505 aa14.23□□□□□ -0.13
VPS52-220ENST00000493674 BLOC1S4Q9NUP1 217 aa14.23□□□□□ -0.13
VPS52-220ENST00000493674 STK17AQ9UEE5 414 aa14.23□□□□□ -0.13
VPS52-220ENST00000493674 CCDC39Q9UFE4 941 aa14.23□□□□□ -0.13
VPS52-220ENST00000493674 TUBE1Q9UJT0 475 aa14.23□□□□□ -0.13
VPS52-220ENST00000493674 DIS3Q9Y2L1 958 aaKnown RBP14.23□□□□□ -0.13
VPS52-220ENST00000493674 B4DLN1 442 aa14.22□□□□□ -0.13
VPS52-220ENST00000493674 EML1O00423 815 aa14.22□□□□□ -0.13
VPS52-220ENST00000493674 ATP9AO75110 1047 aa14.22□□□□□ -0.13
VPS52-220ENST00000493674 SPATA31C1P0DKV0 1188 aa14.22□□□□□ -0.13
VPS52-220ENST00000493674 MUTP22033 750 aa14.22□□□□□ -0.13
VPS52-220ENST00000493674 RPA1P27694 616 aa14.22□□□□□ -0.13
VPS52-220ENST00000493674 STAT6P42226 847 aa14.22□□□□□ -0.13
VPS52-220ENST00000493674 ECM1Q16610 540 aa14.22□□□□□ -0.13
VPS52-220ENST00000493674 GNPTABQ3T906 1256 aa14.22□□□□□ -0.13
VPS52-220ENST00000493674 NT5DC1Q5TFE4 455 aa14.22□□□□□ -0.13
VPS52-220ENST00000493674 RRAGBQ5VZM2 374 aa14.22□□□□□ -0.13
VPS52-220ENST00000493674 KRT79Q5XKE5 535 aa14.22□□□□□ -0.13
VPS52-220ENST00000493674 MAMDC4Q6UXC1 1216 aa14.22□□□□□ -0.13
VPS52-220ENST00000493674 KCTD17Q8N5Z5 321 aa14.22□□□□□ -0.13
VPS52-220ENST00000493674 USP6NLQ92738 828 aa14.22□□□□□ -0.13
VPS52-220ENST00000493674 CALML4Q96GE6 196 aa14.22□□□□□ -0.13
VPS52-220ENST00000493674 UIMC1Q96RL1 719 aa14.22□□□□□ -0.13
VPS52-220ENST00000493674 MTRQ99707 1265 aa14.22□□□□□ -0.13
VPS52-220ENST00000493674 SDF4Q9BRK5 362 aa14.22□□□□□ -0.13
VPS52-220ENST00000493674 POLR3CQ9BUI4 534 aaPredicted RBP14.22□□□□□ -0.13
VPS52-220ENST00000493674 PANK2Q9BZ23 570 aa14.22□□□□□ -0.13
VPS52-220ENST00000493674 KBTBD4Q9NVX7 518 aa14.22□□□□□ -0.13
VPS52-220ENST00000493674 RNF186Q9NXI6 227 aa14.22□□□□□ -0.13
VPS52-220ENST00000493674 KIAA1468Q9P260 1216 aa14.22□□□□□ -0.13
VPS52-220ENST00000493674 IVNS1ABPQ9Y6Y0 642 aa14.22□□□□□ -0.13
VPS52-220ENST00000493674 SIP14410 1827 aa14.22□□□□□ -0.13
VPS52-220ENST00000493674 MED24O75448 989 aa14.21□□□□□ -0.13
VPS52-220ENST00000493674 IGHA2P01877 340 aa14.21□□□□□ -0.13
VPS52-220ENST00000493674 HOXC6P09630 235 aa14.21□□□□□ -0.13
VPS52-220ENST00000493674 PDE4DQ08499 809 aa14.21□□□□□ -0.13
VPS52-220ENST00000493674 POSTNQ15063 836 aa14.21□□□□□ -0.13
VPS52-220ENST00000493674 WDR78Q5VTH9 848 aa14.21□□□□□ -0.13
VPS52-220ENST00000493674 HAUS3Q68CZ6 603 aa14.21□□□□□ -0.13
VPS52-220ENST00000493674 NCAPH2Q6IBW4 605 aa14.21□□□□□ -0.13
VPS52-220ENST00000493674 CKAP2LQ8IYA6 745 aa14.21□□□□□ -0.13
VPS52-220ENST00000493674 ERMNQ8TAM6 284 aa14.21□□□□□ -0.13
VPS52-220ENST00000493674 PAGE5Q96GU1 130 aa14.21□□□□□ -0.13
VPS52-220ENST00000493674 MPHOSPH6Q99547 160 aaKnown RBP14.21□□□□□ -0.13
VPS52-220ENST00000493674 HSD17B14Q9BPX1 270 aa14.21□□□□□ -0.13
VPS52-220ENST00000493674 SENP7Q9BQF6 1050 aa14.21□□□□□ -0.13
VPS52-220ENST00000493674 KATNBL1Q9H079 304 aa14.21□□□□□ -0.13
VPS52-220ENST00000493674 TUFT1Q9NNX1 390 aa14.21□□□□□ -0.13
VPS52-220ENST00000493674 POTEB3A0JP26 581 aa14.2□□□□□ -0.14
VPS52-220ENST00000493674 FSD2A1L4K1 749 aa14.2□□□□□ -0.14
VPS52-220ENST00000493674 ASB14A6NK59 587 aa14.2□□□□□ -0.14
VPS52-220ENST00000493674 CCNE2O96020 404 aa14.2□□□□□ -0.14
VPS52-220ENST00000493674 PRR29P0C7W0 189 aa14.2□□□□□ -0.14
VPS52-220ENST00000493674 CCT6AP40227 531 aaKnown RBP14.2□□□□□ -0.14
VPS52-220ENST00000493674 SARSP49591 514 aaKnown RBP14.2□□□□□ -0.14
VPS52-220ENST00000493674 KRT76Q01546 638 aa14.2□□□□□ -0.14
VPS52-220ENST00000493674 DPYDQ12882 1025 aa14.2□□□□□ -0.14
VPS52-220ENST00000493674 PNOCQ13519 176 aa14.2□□□□□ -0.14
VPS52-220ENST00000493674 EPHA7Q15375 998 aa14.2□□□□□ -0.14
VPS52-220ENST00000493674 POTEBQ6S5H4 581 aa14.2□□□□□ -0.14
VPS52-220ENST00000493674 KCNK18Q7Z418 384 aa14.2□□□□□ -0.14
VPS52-220ENST00000493674 GAS2L3Q86XJ1 694 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms