RNA–Protein interactions for RNA: ENST00000493507.5

CCNB3-208, Transcript of cyclin B3, humanhuman

TSL 1 (best)

Gene CCNB3, Length 340 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3-208ENST00000493507 GTF2IRD2BQ6EKJ0 949 aa6.75□□□□□ -1.33
CCNB3-208ENST00000493507 CYP2R1Q6VVX0 501 aa6.75□□□□□ -1.33
CCNB3-208ENST00000493507 ZPBP2Q6X784 338 aa6.75□□□□□ -1.33
CCNB3-208ENST00000493507 GTF2IRD2Q86UP8 949 aa6.75□□□□□ -1.33
CCNB3-208ENST00000493507 NME9Q86XW9 330 aa6.75□□□□□ -1.33
CCNB3-208ENST00000493507 NGDNQ8NEJ9 315 aaKnown RBP6.75□□□□□ -1.33
CCNB3-208ENST00000493507 CCDC140Q96MF4 163 aa6.75□□□□□ -1.33
CCNB3-208ENST00000493507 LNPKQ9C0E8 428 aa6.75□□□□□ -1.33
CCNB3-208ENST00000493507 SLC12A5Q9H2X9 1139 aa6.75□□□□□ -1.33
CCNB3-208ENST00000493507 NKX2-4Q9H2Z4 354 aa6.75□□□□□ -1.33
CCNB3-208ENST00000493507 CWC22Q9HCG8 908 aaKnown RBP6.75□□□□□ -1.33
CCNB3-208ENST00000493507 PRDM11Q9NQV5 511 aa6.75□□□□□ -1.33
CCNB3-208ENST00000493507 CYP26B1Q9NR63 512 aa6.75□□□□□ -1.33
CCNB3-208ENST00000493507 C19orf73Q9NVV2 129 aa6.75□□□□□ -1.33
CCNB3-208ENST00000493507 ERVK13-1Q9NX77 482 aa6.75□□□□□ -1.33
CCNB3-208ENST00000493507 SNTG2Q9NY99 539 aa6.75□□□□□ -1.33
CCNB3-208ENST00000493507 BACE2Q9Y5Z0 518 aa6.75□□□□□ -1.33
CCNB3-208ENST00000493507 TUBGCP6Q96RT7 1819 aa6.75□□□□□ -1.33
CCNB3-208ENST00000493507 DOT1LQ8TEK3 1739 aa6.75□□□□□ -1.33
CCNB3-208ENST00000493507 EDC4Q6P2E9 1401 aaKnown RBP6.75□□□□□ -1.33
CCNB3-208ENST00000493507 EVC2Q86UK5 1308 aa6.75□□□□□ -1.33
CCNB3-208ENST00000493507 KTN1Q86UP2 1357 aaKnown RBP6.74□□□□□ -1.33
CCNB3-208ENST00000493507 PKD1L3Q7Z443 1732 aa6.74□□□□□ -1.33
CCNB3-208ENST00000493507 A0A1W2PQU0 124 aa6.74□□□□□ -1.33
CCNB3-208ENST00000493507 STXBP3O00186 592 aa6.74□□□□□ -1.33
CCNB3-208ENST00000493507 FGF10O15520 208 aaPredicted RBP6.74□□□□□ -1.33
CCNB3-208ENST00000493507 TBC1D8O95759 1140 aa6.74□□□□□ -1.33
CCNB3-208ENST00000493507 HPXP02790 462 aa6.74□□□□□ -1.33
CCNB3-208ENST00000493507 FBLN1P23142 703 aa6.74□□□□□ -1.33
CCNB3-208ENST00000493507 HOXC12P31275 282 aa6.74□□□□□ -1.33
CCNB3-208ENST00000493507 HSP90AA2PQ14568 343 aaPredicted RBP6.74□□□□□ -1.33
CCNB3-208ENST00000493507 RASA3Q14644 834 aa6.74□□□□□ -1.33
CCNB3-208ENST00000493507 NR0B2Q15466 257 aa6.74□□□□□ -1.33
CCNB3-208ENST00000493507 SLC14A2Q15849 920 aa6.74□□□□□ -1.33
CCNB3-208ENST00000493507 HLA-DQA1Q5Y7H0 255 aa6.74□□□□□ -1.33
CCNB3-208ENST00000493507 PTF1AQ7RTS3 328 aa6.74□□□□□ -1.33
CCNB3-208ENST00000493507 KSR1Q8IVT5 923 aa6.74□□□□□ -1.33
CCNB3-208ENST00000493507 LILRA2Q8N149 483 aa6.74□□□□□ -1.33
CCNB3-208ENST00000493507 MYLIPQ8WY64 445 aa6.74□□□□□ -1.33
CCNB3-208ENST00000493507 MCMBPQ9BTE3 642 aa6.74□□□□□ -1.33
CCNB3-208ENST00000493507 ZSWIM4Q9H7M6 989 aa6.74□□□□□ -1.33
CCNB3-208ENST00000493507 NHSQ6T4R5 1651 aa6.74□□□□□ -1.33
CCNB3-208ENST00000493507 ANKRD36BQ8N2N9 1353 aa6.73□□□□□ -1.33
CCNB3-208ENST00000493507 TRBV23OR9-2A0A075B6M9 112 aa6.73□□□□□ -1.33
CCNB3-208ENST00000493507 A0A1W2PQ45 241 aaPredicted RBP6.73□□□□□ -1.33
CCNB3-208ENST00000493507 A0A1W2PQY0 241 aa6.73□□□□□ -1.33
CCNB3-208ENST00000493507 JUNBP17275 347 aaPredicted RBP6.73□□□□□ -1.33
CCNB3-208ENST00000493507 PPP2R2AP63151 447 aa6.73□□□□□ -1.33
CCNB3-208ENST00000493507 RBM10P98175 930 aaKnown RBP6.73□□□□□ -1.33
CCNB3-208ENST00000493507 CCDC144BQ3MJ40 725 aa6.73□□□□□ -1.33
CCNB3-208ENST00000493507 BTN2A2Q8WVV5 523 aa6.73□□□□□ -1.33
CCNB3-208ENST00000493507 MRFAP1L1Q96HT8 127 aa6.73□□□□□ -1.33
CCNB3-208ENST00000493507 HHIPL1Q96JK4 782 aa6.73□□□□□ -1.33
CCNB3-208ENST00000493507 PTCHD1Q96NR3 888 aa6.73□□□□□ -1.33
CCNB3-208ENST00000493507 SPATA9Q9BWV2 254 aa6.73□□□□□ -1.33
CCNB3-208ENST00000493507 LGR4Q9BXB1 951 aa6.73□□□□□ -1.33
CCNB3-208ENST00000493507 PDGFDQ9GZP0 370 aaPredicted RBP6.73□□□□□ -1.33
CCNB3-208ENST00000493507 EBF1Q9UH73 591 aa6.73□□□□□ -1.33
CCNB3-208ENST00000493507 BTAF1O14981 1849 aa6.73□□□□□ -1.33
CCNB3-208ENST00000493507 RGPD3A6NKT7 1758 aaPredicted RBP6.72□□□□□ -1.33
CCNB3-208ENST00000493507 RGPD4Q7Z3J3 1758 aa6.72□□□□□ -1.33
CCNB3-208ENST00000493507 FAM221BA6H8Z2 402 aa6.72□□□□□ -1.33
CCNB3-208ENST00000493507 WTIPA6NIX2 430 aaPredicted RBP6.72□□□□□ -1.33
CCNB3-208ENST00000493507 FADS2P1A8MWK0 482 aa6.72□□□□□ -1.33
CCNB3-208ENST00000493507 CPP00450 1065 aa6.72□□□□□ -1.33
CCNB3-208ENST00000493507 HSPA5P11021 654 aaKnown RBP6.72□□□□□ -1.33
CCNB3-208ENST00000493507 ITGB5P18084 799 aa6.72□□□□□ -1.33
CCNB3-208ENST00000493507 YY1P25490 414 aa6.72□□□□□ -1.33
CCNB3-208ENST00000493507 RTP1P59025 263 aa6.72□□□□□ -1.33
CCNB3-208ENST00000493507 SSRP1Q08945 709 aaKnown RBP6.72□□□□□ -1.33
CCNB3-208ENST00000493507 SCRN1Q12765 414 aa6.72□□□□□ -1.33
CCNB3-208ENST00000493507 SNX17Q15036 470 aa6.72□□□□□ -1.33
CCNB3-208ENST00000493507 CEP128Q6ZU80 1094 aa6.72□□□□□ -1.33
CCNB3-208ENST00000493507 SPATC1Q76KD6 591 aa6.72□□□□□ -1.33
CCNB3-208ENST00000493507 DPH6Q7L8W6 267 aa6.72□□□□□ -1.33
CCNB3-208ENST00000493507 ABHD4Q8TB40 342 aa6.72□□□□□ -1.33
CCNB3-208ENST00000493507 COPS5Q92905 334 aa6.72□□□□□ -1.33
CCNB3-208ENST00000493507 KIRREL1Q96J84 757 aa6.72□□□□□ -1.33
CCNB3-208ENST00000493507 NSD3Q9BZ95 1437 aa6.71□□□□□ -1.34
CCNB3-208ENST00000493507 TBX1O43435 398 aa6.71□□□□□ -1.34
CCNB3-208ENST00000493507 KCNQ2O43526 872 aa6.71□□□□□ -1.34
CCNB3-208ENST00000493507 USP2O75604 605 aaPredicted RBP6.71□□□□□ -1.34
CCNB3-208ENST00000493507 SCG5P05408 212 aa6.71□□□□□ -1.34
CCNB3-208ENST00000493507 SNRPB2P08579 225 aaKnown RBP6.71□□□□□ -1.34
CCNB3-208ENST00000493507 PAMP19021 973 aa6.71□□□□□ -1.34
CCNB3-208ENST00000493507 EVA1CP58658 441 aa6.71□□□□□ -1.34
CCNB3-208ENST00000493507 BMS1Q14692 1282 aaKnown RBP6.71□□□□□ -1.34
CCNB3-208ENST00000493507 JAMLQ86YT9 394 aa6.71□□□□□ -1.34
CCNB3-208ENST00000493507 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.71□□□□□ -1.34
CCNB3-208ENST00000493507 TMEM52Q8NDY8 209 aa6.71□□□□□ -1.34
CCNB3-208ENST00000493507 AARSD1Q9BTE6 412 aaKnown RBP6.71□□□□□ -1.34
CCNB3-208ENST00000493507 PFDN2Q9UHV9 154 aa6.71□□□□□ -1.34
CCNB3-208ENST00000493507 PAPPAQ13219 1627 aa6.71□□□□□ -1.34
CCNB3-208ENST00000493507 ITGB4P16144 1822 aa6.71□□□□□ -1.34
CCNB3-208ENST00000493507 MEGF6O75095 1541 aa6.71□□□□□ -1.34
CCNB3-208ENST00000493507 BRD4O60885 1362 aaPredicted RBP6.7□□□□□ -1.34
CCNB3-208ENST00000493507 TRAV20A0A0B4J274 112 aa6.7□□□□□ -1.34
CCNB3-208ENST00000493507 NPHP3-ACAD11A0A0J9YXS1 232 aa6.7□□□□□ -1.34
CCNB3-208ENST00000493507 NRDCO43847 1150 aa6.7□□□□□ -1.34
CCNB3-208ENST00000493507 GCP02774 474 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms