RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 TMEM209Q96SK2 561 aa5.19□□□□□ -1.58
PTCD3-218ENST00000493430 TMEM168Q9H0V1 697 aa5.19□□□□□ -1.58
PTCD3-218ENST00000493430 SMOC1Q9H4F8 434 aa5.19□□□□□ -1.58
PTCD3-218ENST00000493430 MYOTQ9UBF9 498 aa5.19□□□□□ -1.58
PTCD3-218ENST00000493430 NPFFR2Q9Y5X5 522 aa5.19□□□□□ -1.58
PTCD3-218ENST00000493430 C1QTNF3-AMACRE9PGA6 284 aa5.18□□□□□ -1.58
PTCD3-218ENST00000493430 KRIT1O00522 736 aa5.18□□□□□ -1.58
PTCD3-218ENST00000493430 LAMTOR5O43504 91 aa5.18□□□□□ -1.58
PTCD3-218ENST00000493430 B4GALT3O60512 393 aa5.18□□□□□ -1.58
PTCD3-218ENST00000493430 GJB6O95452 261 aa5.18□□□□□ -1.58
PTCD3-218ENST00000493430 LRG1P02750 347 aa5.18□□□□□ -1.58
PTCD3-218ENST00000493430 CAPNS1P04632 268 aa5.18□□□□□ -1.58
PTCD3-218ENST00000493430 LIMS2Q7Z4I7 341 aa5.18□□□□□ -1.58
PTCD3-218ENST00000493430 TRIM48Q8IWZ4 208 aa5.18□□□□□ -1.58
PTCD3-218ENST00000493430 KCTD13Q8WZ19 329 aa5.18□□□□□ -1.58
PTCD3-218ENST00000493430 C1orf159Q96HA4 380 aa5.18□□□□□ -1.58
PTCD3-218ENST00000493430 ZSWIM3Q96MP5 696 aa5.18□□□□□ -1.58
PTCD3-218ENST00000493430 YTHDC1Q96MU7 727 aaKnown RBP5.18□□□□□ -1.58
PTCD3-218ENST00000493430 WRNIP1Q96S55 665 aa5.18□□□□□ -1.58
PTCD3-218ENST00000493430 SSBP3Q9BWW4 388 aaPredicted RBP5.18□□□□□ -1.58
PTCD3-218ENST00000493430 CROTQ9UKG9 612 aa5.18□□□□□ -1.58
PTCD3-218ENST00000493430 R3HCC1Q9Y3T6 440 aaKnown RBP5.18□□□□□ -1.58
PTCD3-218ENST00000493430 TNFRSF1AP19438 455 aa5.17□□□□□ -1.58
PTCD3-218ENST00000493430 GRIA2P42262 883 aa5.17□□□□□ -1.58
PTCD3-218ENST00000493430 MLLT6P55198 1093 aaPredicted RBP5.17□□□□□ -1.58
PTCD3-218ENST00000493430 PPP2R2AP63151 447 aa5.17□□□□□ -1.58
PTCD3-218ENST00000493430 MAP4K2Q12851 820 aa5.17□□□□□ -1.58
PTCD3-218ENST00000493430 CYP4F22Q6NT55 531 aa5.17□□□□□ -1.58
PTCD3-218ENST00000493430 HOMEZQ8IX15 550 aa5.17□□□□□ -1.58
PTCD3-218ENST00000493430 DVL3Q92997 716 aaPredicted RBP5.17□□□□□ -1.58
PTCD3-218ENST00000493430 KRTAP3-1Q9BYR8 98 aa5.17□□□□□ -1.58
PTCD3-218ENST00000493430 ZNF408Q9H9D4 720 aa5.17□□□□□ -1.58
PTCD3-218ENST00000493430 GPR27Q9NS67 375 aa5.17□□□□□ -1.58
PTCD3-218ENST00000493430 FTSJ1Q9UET6 329 aa5.17□□□□□ -1.58
PTCD3-218ENST00000493430 TARBP1Q13395 1621 aaKnown RBP5.16□□□□□ -1.58
PTCD3-218ENST00000493430 NPEPPSL1A6NEC2 478 aa5.16□□□□□ -1.58
PTCD3-218ENST00000493430 ZXDAP98168 799 aa5.16□□□□□ -1.58
PTCD3-218ENST00000493430 ARID5AQ03989 594 aa5.16□□□□□ -1.58
PTCD3-218ENST00000493430 SLC10A6Q3KNW5 377 aa5.16□□□□□ -1.58
PTCD3-218ENST00000493430 MBD6Q96DN6 1003 aa5.16□□□□□ -1.58
PTCD3-218ENST00000493430 IER2Q9BTL4 223 aa5.16□□□□□ -1.58
PTCD3-218ENST00000493430 CDIP1Q9H305 208 aa5.16□□□□□ -1.58
PTCD3-218ENST00000493430 SLC6A20Q9NP91 592 aa5.16□□□□□ -1.58
PTCD3-218ENST00000493430 HSPBP1Q9NZL4 362 aa5.16□□□□□ -1.58
PTCD3-218ENST00000493430 ST6GALNAC2Q9UJ37 374 aa5.16□□□□□ -1.58
PTCD3-218ENST00000493430 ZNF608Q9ULD9 1512 aaPredicted RBP5.16□□□□□ -1.58
PTCD3-218ENST00000493430 CADPSQ9ULU8 1353 aa5.16□□□□□ -1.58
PTCD3-218ENST00000493430 CFTRP13569 1480 aa5.15□□□□□ -1.58
PTCD3-218ENST00000493430 A0A1W2PQU0 124 aa5.15□□□□□ -1.59
PTCD3-218ENST00000493430 MATN3O15232 486 aa5.15□□□□□ -1.59
PTCD3-218ENST00000493430 PPP2CBP62714 309 aa5.15□□□□□ -1.59
PTCD3-218ENST00000493430 PPP2CAP67775 309 aa5.15□□□□□ -1.59
PTCD3-218ENST00000493430 HSP90AA2PQ14568 343 aaPredicted RBP5.15□□□□□ -1.59
PTCD3-218ENST00000493430 PKN3Q6P5Z2 889 aa5.15□□□□□ -1.59
PTCD3-218ENST00000493430 TRMT10BQ6PF06 316 aaKnown RBP5.15□□□□□ -1.59
PTCD3-218ENST00000493430 RSPO2Q6UXX9 243 aaPredicted RBP5.15□□□□□ -1.59
PTCD3-218ENST00000493430 TMC5Q6UXY8 1006 aa5.15□□□□□ -1.59
PTCD3-218ENST00000493430 KBTBD2Q8IY47 623 aa5.15□□□□□ -1.59
PTCD3-218ENST00000493430 KLHL36Q8N4N3 616 aa5.15□□□□□ -1.59
PTCD3-218ENST00000493430 KISS1RQ969F8 398 aaPredicted RBP5.15□□□□□ -1.59
PTCD3-218ENST00000493430 JAM3Q9BX67 310 aa5.15□□□□□ -1.59
PTCD3-218ENST00000493430 BARX1Q9HBU1 254 aaPredicted RBP5.15□□□□□ -1.59
PTCD3-218ENST00000493430 JADE2Q9NQC1 790 aa5.15□□□□□ -1.59
PTCD3-218ENST00000493430 PPP4R1LQ9P1A2 415 aa5.15□□□□□ -1.59
PTCD3-218ENST00000493430 ASH2LQ9UBL3 628 aa5.15□□□□□ -1.59
PTCD3-218ENST00000493430 ABCC8Q09428 1581 aa5.15□□□□□ -1.59
PTCD3-218ENST00000493430 TOPBP1Q92547 1522 aa5.14□□□□□ -1.59
PTCD3-218ENST00000493430 DNMBPQ6XZF7 1577 aa5.14□□□□□ -1.59
PTCD3-218ENST00000493430 DLX3O60479 287 aa5.14□□□□□ -1.59
PTCD3-218ENST00000493430 B4GALT4O60513 344 aa5.14□□□□□ -1.59
PTCD3-218ENST00000493430 FGRP09769 529 aa5.14□□□□□ -1.59
PTCD3-218ENST00000493430 TCF3P15923 654 aa5.14□□□□□ -1.59
PTCD3-218ENST00000493430 NFATC3Q12968 1075 aa5.14□□□□□ -1.59
PTCD3-218ENST00000493430 ARHGEF18Q6ZSZ5 1173 aa5.14□□□□□ -1.59
PTCD3-218ENST00000493430 USP53Q70EK8 1073 aa5.14□□□□□ -1.59
PTCD3-218ENST00000493430 TTLL11Q8NHH1 800 aa5.14□□□□□ -1.59
PTCD3-218ENST00000493430 PIP4K2CQ8TBX8 421 aa5.14□□□□□ -1.59
PTCD3-218ENST00000493430 ZCCHC14Q8WYQ9 949 aaKnown RBP5.14□□□□□ -1.59
PTCD3-218ENST00000493430 PHF20Q9BVI0 1012 aa5.14□□□□□ -1.59
PTCD3-218ENST00000493430 ST7Q9NRC1 585 aa5.14□□□□□ -1.59
PTCD3-218ENST00000493430 WASF3Q9UPY6 502 aa5.14□□□□□ -1.59
PTCD3-218ENST00000493430 ZDHHC9Q9Y397 364 aa5.14□□□□□ -1.59
PTCD3-218ENST00000493430 NUB1Q9Y5A7 615 aa5.14□□□□□ -1.59
PTCD3-218ENST00000493430 RIMBP3CA6NJZ7 1639 aa5.14□□□□□ -1.59
PTCD3-218ENST00000493430 RIMBP3BA6NNM3 1639 aa5.14□□□□□ -1.59
PTCD3-218ENST00000493430 RIMBP3Q9UFD9 1639 aa5.14□□□□□ -1.59
PTCD3-218ENST00000493430 PDS5BQ9NTI5 1447 aa5.14□□□□□ -1.59
PTCD3-218ENST00000493430 IQCA1LA6NCM1 817 aa5.13□□□□□ -1.59
PTCD3-218ENST00000493430 SLC27A2O14975 620 aa5.13□□□□□ -1.59
PTCD3-218ENST00000493430 MSCO60682 206 aa5.13□□□□□ -1.59
PTCD3-218ENST00000493430 EPHB4P54760 987 aa5.13□□□□□ -1.59
PTCD3-218ENST00000493430 GRIN1Q05586 938 aa5.13□□□□□ -1.59
PTCD3-218ENST00000493430 VASNQ6EMK4 673 aa5.13□□□□□ -1.59
PTCD3-218ENST00000493430 CIR1Q86X95 450 aaPredicted RBP5.13□□□□□ -1.59
PTCD3-218ENST00000493430 MCF2L2Q86YR7 1114 aa5.13□□□□□ -1.59
PTCD3-218ENST00000493430 IGDCC4Q8TDY8 1250 aa5.13□□□□□ -1.59
PTCD3-218ENST00000493430 DCAF4Q8WV16 495 aa5.13□□□□□ -1.59
PTCD3-218ENST00000493430 CLEC4DQ8WXI8 215 aa5.13□□□□□ -1.59
PTCD3-218ENST00000493430 SGSM3Q96HU1 749 aa5.13□□□□□ -1.59
PTCD3-218ENST00000493430 TSC22D4Q9Y3Q8 395 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms