RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 KCNH7Q9NS40 1196 aa14.55□□□□□ -0.08
CLIP2-209ENST00000493166 FAM86B1E9PN63 330 aa14.54□□□□□ -0.08
CLIP2-209ENST00000493166 H0YGN5 161 aa14.54□□□□□ -0.08
CLIP2-209ENST00000493166 MEIS1O00470 390 aa14.54□□□□□ -0.08
CLIP2-209ENST00000493166 FAM86B2P0C5J1 330 aa14.54□□□□□ -0.08
CLIP2-209ENST00000493166 ARP10275 920 aa14.54□□□□□ -0.08
CLIP2-209ENST00000493166 SETQ01105 290 aaPredicted RBP14.54□□□□□ -0.08
CLIP2-209ENST00000493166 SP4Q02446 784 aa14.54□□□□□ -0.08
CLIP2-209ENST00000493166 TLE2Q04725 743 aa14.54□□□□□ -0.08
CLIP2-209ENST00000493166 PLA2G4DQ86XP0 818 aa14.54□□□□□ -0.08
CLIP2-209ENST00000493166 C8orf76Q96K31 380 aa14.54□□□□□ -0.08
CLIP2-209ENST00000493166 SDF4Q9BRK5 362 aa14.54□□□□□ -0.08
CLIP2-209ENST00000493166 BCAS3Q9H6U6 928 aa14.54□□□□□ -0.08
CLIP2-209ENST00000493166 AGO4Q9HCK5 861 aaKnown RBP14.54□□□□□ -0.08
CLIP2-209ENST00000493166 ZMYND8Q9ULU4 1186 aaPredicted RBP14.54□□□□□ -0.08
CLIP2-209ENST00000493166 GRIN2DO15399 1336 aa14.53□□□□□ -0.08
CLIP2-209ENST00000493166 IGLV3-22A0A075B6J6 115 aa14.53□□□□□ -0.08
CLIP2-209ENST00000493166 DCDC2CA8MYV0 355 aa14.53□□□□□ -0.08
CLIP2-209ENST00000493166 PPFIA4O75335 1185 aa14.53□□□□□ -0.08
CLIP2-209ENST00000493166 MMP1P03956 469 aa14.53□□□□□ -0.08
CLIP2-209ENST00000493166 ZNF286BP0CG31 522 aa14.53□□□□□ -0.08
CLIP2-209ENST00000493166 HOXD8P13378 290 aaPredicted RBP14.53□□□□□ -0.08
CLIP2-209ENST00000493166 CIITAP33076 1130 aa14.53□□□□□ -0.08
CLIP2-209ENST00000493166 CDK7P50613 346 aa14.53□□□□□ -0.08
CLIP2-209ENST00000493166 USP11P51784 963 aa14.53□□□□□ -0.08
CLIP2-209ENST00000493166 CHMP4BP1P59074 171 aa14.53□□□□□ -0.08
CLIP2-209ENST00000493166 PRR16Q569H4 304 aa14.53□□□□□ -0.08
CLIP2-209ENST00000493166 PRPF38BQ5VTL8 546 aaKnown RBP14.53□□□□□ -0.08
CLIP2-209ENST00000493166 KRT40Q6A162 431 aa14.53□□□□□ -0.08
CLIP2-209ENST00000493166 ANKRD33Q7Z3H0 272 aa14.53□□□□□ -0.08
CLIP2-209ENST00000493166 OXER1Q8TDS5 423 aa14.53□□□□□ -0.08
CLIP2-209ENST00000493166 GPR20Q99678 358 aa14.53□□□□□ -0.08
CLIP2-209ENST00000493166 KATNAL1Q9BW62 490 aa14.53□□□□□ -0.08
CLIP2-209ENST00000493166 SEZ6LQ9BYH1 1024 aa14.53□□□□□ -0.08
CLIP2-209ENST00000493166 PRDM5Q9NQX1 630 aaPredicted RBP14.53□□□□□ -0.08
CLIP2-209ENST00000493166 PRKAG2Q9UGJ0 569 aa14.53□□□□□ -0.08
CLIP2-209ENST00000493166 NFASCO94856 1347 aa14.52□□□□□ -0.08
CLIP2-209ENST00000493166 TLR3O15455 904 aaKnown RBP14.52□□□□□ -0.09
CLIP2-209ENST00000493166 F2P00734 622 aa14.52□□□□□ -0.09
CLIP2-209ENST00000493166 CLTBP09497 229 aa14.52□□□□□ -0.09
CLIP2-209ENST00000493166 SYN1P17600 705 aa14.52□□□□□ -0.09
CLIP2-209ENST00000493166 GUCY1B3Q02153 619 aa14.52□□□□□ -0.09
CLIP2-209ENST00000493166 NR5A1Q13285 461 aa14.52□□□□□ -0.09
CLIP2-209ENST00000493166 SAFBQ15424 915 aaKnown RBP eCLIP14.52□□□□□ -0.09
CLIP2-209ENST00000493166 INF2Q27J81 1249 aa14.52□□□□□ -0.09
CLIP2-209ENST00000493166 NBPF20Q3BBV1 942 aa14.52□□□□□ -0.09
CLIP2-209ENST00000493166 FAM47CQ5HY64 1035 aa14.52□□□□□ -0.09
CLIP2-209ENST00000493166 PIK3AP1Q6ZUJ8 805 aa14.52□□□□□ -0.09
CLIP2-209ENST00000493166 DIS3L2Q8IYB7 885 aaKnown RBP14.52□□□□□ -0.09
CLIP2-209ENST00000493166 SLC43A3Q8NBI5 491 aa14.52□□□□□ -0.09
CLIP2-209ENST00000493166 TOX2Q96NM4 488 aa14.52□□□□□ -0.09
CLIP2-209ENST00000493166 ZNF577Q9BSK1 485 aa14.52□□□□□ -0.09
CLIP2-209ENST00000493166 JPH1Q9HDC5 661 aaPredicted RBP14.52□□□□□ -0.09
CLIP2-209ENST00000493166 KIF3AQ9Y496 699 aa14.52□□□□□ -0.09
CLIP2-209ENST00000493166 TANC1Q9C0D5 1861 aa14.51□□□□□ -0.09
CLIP2-209ENST00000493166 IPO5O00410 1097 aaKnown RBP14.51□□□□□ -0.09
CLIP2-209ENST00000493166 LGALS2P05162 132 aa14.51□□□□□ -0.09
CLIP2-209ENST00000493166 PSEN2P49810 448 aa14.51□□□□□ -0.09
CLIP2-209ENST00000493166 ITGB3BPQ13352 177 aaPredicted RBP14.51□□□□□ -0.09
CLIP2-209ENST00000493166 MFSD10Q14728 455 aa14.51□□□□□ -0.09
CLIP2-209ENST00000493166 NFRKBQ6P4R8 1299 aa14.51□□□□□ -0.09
CLIP2-209ENST00000493166 NEK8Q86SG6 692 aa14.51□□□□□ -0.09
CLIP2-209ENST00000493166 FAM126BQ8IXS8 530 aa14.51□□□□□ -0.09
CLIP2-209ENST00000493166 KAT2BQ92831 832 aa14.51□□□□□ -0.09
CLIP2-209ENST00000493166 UIMC1Q96RL1 719 aa14.51□□□□□ -0.09
CLIP2-209ENST00000493166 PDLIM7Q9NR12 457 aa14.51□□□□□ -0.09
CLIP2-209ENST00000493166 SLC9A2Q9UBY0 812 aa14.51□□□□□ -0.09
CLIP2-209ENST00000493166 TELO2Q9Y4R8 837 aa14.51□□□□□ -0.09
CLIP2-209ENST00000493166 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.51□□□□□ -0.09
CLIP2-209ENST00000493166 BTBD18B2RXH4 712 aa14.5□□□□□ -0.09
CLIP2-209ENST00000493166 DDX39AO00148 427 aaKnown RBP14.5□□□□□ -0.09
CLIP2-209ENST00000493166 EDIL3O43854 480 aa14.5□□□□□ -0.09
CLIP2-209ENST00000493166 TDP2O95551 362 aa14.5□□□□□ -0.09
CLIP2-209ENST00000493166 TCF7P36402 384 aaPredicted RBP14.5□□□□□ -0.09
CLIP2-209ENST00000493166 FAAP100Q0VG06 881 aa14.5□□□□□ -0.09
CLIP2-209ENST00000493166 KIAA0753Q2KHM9 967 aa14.5□□□□□ -0.09
CLIP2-209ENST00000493166 LETM2Q2VYF4 491 aa14.5□□□□□ -0.09
CLIP2-209ENST00000493166 UTP14CQ5TAP6 766 aaKnown RBP14.5□□□□□ -0.09
CLIP2-209ENST00000493166 FBXO18Q8NFZ0 1043 aa14.5□□□□□ -0.09
CLIP2-209ENST00000493166 PPP1R13LQ8WUF5 828 aa14.5□□□□□ -0.09
CLIP2-209ENST00000493166 SEPT1Q8WYJ6 367 aa14.5□□□□□ -0.09
CLIP2-209ENST00000493166 TNFRSF25Q93038 417 aa14.5□□□□□ -0.09
CLIP2-209ENST00000493166 LENG9Q96B70 501 aa14.5□□□□□ -0.09
CLIP2-209ENST00000493166 C16orf70Q9BSU1 422 aa14.5□□□□□ -0.09
CLIP2-209ENST00000493166 TMEM39AQ9NV64 488 aa14.5□□□□□ -0.09
CLIP2-209ENST00000493166 TCEAL9Q9UHQ7 104 aa14.5□□□□□ -0.09
CLIP2-209ENST00000493166 ZNF215Q9UL58 517 aaPredicted RBP14.5□□□□□ -0.09
CLIP2-209ENST00000493166 SMC3Q9UQE7 1217 aa14.5□□□□□ -0.09
CLIP2-209ENST00000493166 CYP3A7-CYP3A51PA0A087WV96 503 aa14.49□□□□□ -0.09
CLIP2-209ENST00000493166 FAM205CA6NFA0 338 aa14.49□□□□□ -0.09
CLIP2-209ENST00000493166 H3BRB1 525 aa14.49□□□□□ -0.09
CLIP2-209ENST00000493166 B4GALT4O60513 344 aa14.49□□□□□ -0.09
CLIP2-209ENST00000493166 CYP3A7P24462 503 aa14.49□□□□□ -0.09
CLIP2-209ENST00000493166 GJB2P29033 226 aa14.49□□□□□ -0.09
CLIP2-209ENST00000493166 ACTR2P61160 394 aa14.49□□□□□ -0.09
CLIP2-209ENST00000493166 PTPN11Q06124 597 aaPredicted RBP14.49□□□□□ -0.09
CLIP2-209ENST00000493166 GNL2Q13823 731 aaKnown RBP14.49□□□□□ -0.09
CLIP2-209ENST00000493166 Q4G0T1 1027 aa14.49□□□□□ -0.09
CLIP2-209ENST00000493166 EARS2Q5JPH6 523 aaKnown RBP14.49□□□□□ -0.09
CLIP2-209ENST00000493166 MOXD1Q6UVY6 613 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms