RNA–Protein interactions for RNA: ENST00000493075.1

LRTM1-202, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRTM1, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-202ENST00000493075 UBIAD1Q9Y5Z9 338 aa13.19□□□□□ -0.3
LRTM1-202ENST00000493075 CNTNAP5Q8WYK1 1306 aa13.19□□□□□ -0.3
LRTM1-202ENST00000493075 LAMA2P24043 3122 aaKnown RBP13.18□□□□□ -0.3
LRTM1-202ENST00000493075 GOLGA8AA7E2F4 631 aa13.18□□□□□ -0.3
LRTM1-202ENST00000493075 GOLGA8BA8MQT2 603 aa13.18□□□□□ -0.3
LRTM1-202ENST00000493075 FOSP01100 380 aaPredicted RBP13.18□□□□□ -0.3
LRTM1-202ENST00000493075 LGALS2P05162 132 aa13.18□□□□□ -0.3
LRTM1-202ENST00000493075 HOXC8P31273 242 aa13.18□□□□□ -0.3
LRTM1-202ENST00000493075 PBX2P40425 430 aa13.18□□□□□ -0.3
LRTM1-202ENST00000493075 FGD1P98174 961 aa13.18□□□□□ -0.3
LRTM1-202ENST00000493075 GRIN2CQ14957 1233 aa13.18□□□□□ -0.3
LRTM1-202ENST00000493075 WWC2Q6AWC2 1192 aa13.18□□□□□ -0.3
LRTM1-202ENST00000493075 BLOC1S2Q6QNY1 142 aa13.18□□□□□ -0.3
LRTM1-202ENST00000493075 Q6ZUG5 572 aa13.18□□□□□ -0.3
LRTM1-202ENST00000493075 DEFB128Q7Z7B8 93 aa13.18□□□□□ -0.3
LRTM1-202ENST00000493075 DHX38Q92620 1227 aaKnown RBP13.18□□□□□ -0.3
LRTM1-202ENST00000493075 JAKMIP1Q96N16 626 aaKnown RBP13.18□□□□□ -0.3
LRTM1-202ENST00000493075 AGXT2Q9BYV1 514 aa13.18□□□□□ -0.3
LRTM1-202ENST00000493075 EHMT1Q9H9B1 1298 aa13.18□□□□□ -0.3
LRTM1-202ENST00000493075 JADE2Q9NQC1 790 aa13.18□□□□□ -0.3
LRTM1-202ENST00000493075 BARHL2Q9NY43 387 aa13.18□□□□□ -0.3
LRTM1-202ENST00000493075 SORBS3O60504 671 aa13.17□□□□□ -0.3
LRTM1-202ENST00000493075 BAIAP3O94812 1187 aa13.17□□□□□ -0.3
LRTM1-202ENST00000493075 CXCL10P02778 98 aa13.17□□□□□ -0.3
LRTM1-202ENST00000493075 CKBP12277 381 aa13.17□□□□□ -0.3
LRTM1-202ENST00000493075 ATP2A2P16615 1042 aaKnown RBP13.17□□□□□ -0.3
LRTM1-202ENST00000493075 ITGB5P18084 799 aa13.17□□□□□ -0.3
LRTM1-202ENST00000493075 RPS6KB1P23443 525 aa13.17□□□□□ -0.3
LRTM1-202ENST00000493075 CDC27P30260 824 aa13.17□□□□□ -0.3
LRTM1-202ENST00000493075 NAPAP54920 295 aa13.17□□□□□ -0.3
LRTM1-202ENST00000493075 GPNMBQ14956 572 aa13.17□□□□□ -0.3
LRTM1-202ENST00000493075 UBE2SQ16763 222 aa13.17□□□□□ -0.3
LRTM1-202ENST00000493075 TRIM71Q2Q1W2 868 aaKnown RBP13.17□□□□□ -0.3
LRTM1-202ENST00000493075 LRRC8DQ7L1W4 858 aa13.17□□□□□ -0.3
LRTM1-202ENST00000493075 MYLIPQ8WY64 445 aa13.17□□□□□ -0.3
LRTM1-202ENST00000493075 FTOQ9C0B1 505 aaKnown RBP eCLIP13.17□□□□□ -0.3
LRTM1-202ENST00000493075 PCDHA11Q9Y5I1 949 aa13.17□□□□□ -0.3
LRTM1-202ENST00000493075 C17orf102A2RUQ5 167 aa13.16□□□□□ -0.3
LRTM1-202ENST00000493075 SMCO2A6NFE2 343 aa13.16□□□□□ -0.3
LRTM1-202ENST00000493075 ZBBXA8MT70 800 aa13.16□□□□□ -0.3
LRTM1-202ENST00000493075 STXBP3O00186 592 aa13.16□□□□□ -0.3
LRTM1-202ENST00000493075 ATP9AO75110 1047 aa13.16□□□□□ -0.3
LRTM1-202ENST00000493075 GNAT1P11488 350 aa13.16□□□□□ -0.3
LRTM1-202ENST00000493075 KCNA2P16389 499 aa13.16□□□□□ -0.3
LRTM1-202ENST00000493075 ADD1P35611 737 aaKnown RBP13.16□□□□□ -0.3
LRTM1-202ENST00000493075 METAP2P50579 478 aaKnown RBP eCLIP13.16□□□□□ -0.3
LRTM1-202ENST00000493075 EVCP57679 992 aa13.16□□□□□ -0.3
LRTM1-202ENST00000493075 TYW1BQ6NUM6 668 aa13.16□□□□□ -0.3
LRTM1-202ENST00000493075 SERINC5Q86VE9 423 aa13.16□□□□□ -0.3
LRTM1-202ENST00000493075 BRF1Q92994 677 aa13.16□□□□□ -0.3
LRTM1-202ENST00000493075 SLC9A7Q96T83 725 aa13.16□□□□□ -0.3
LRTM1-202ENST00000493075 RNPEPQ9H4A4 650 aa13.16□□□□□ -0.3
LRTM1-202ENST00000493075 SLC28A3Q9HAS3 691 aa13.16□□□□□ -0.3
LRTM1-202ENST00000493075 ZNF215Q9UL58 517 aaPredicted RBP13.16□□□□□ -0.3
LRTM1-202ENST00000493075 PRPF3O43395 683 aaKnown RBP13.15□□□□□ -0.3
LRTM1-202ENST00000493075 SMIM10L2AP0DMW4 78 aa13.15□□□□□ -0.3
LRTM1-202ENST00000493075 SMIM10L2BP0DMW5 78 aa13.15□□□□□ -0.3
LRTM1-202ENST00000493075 CPA1P15085 419 aa13.15□□□□□ -0.3
LRTM1-202ENST00000493075 FOSL2P15408 326 aa13.15□□□□□ -0.3
LRTM1-202ENST00000493075 ADCY7P51828 1080 aa13.15□□□□□ -0.3
LRTM1-202ENST00000493075 ZNF200P98182 395 aaPredicted RBP13.15□□□□□ -0.3
LRTM1-202ENST00000493075 APOBRQ0VD83 1088 aa13.15□□□□□ -0.3
LRTM1-202ENST00000493075 AP3B2Q13367 1082 aa13.15□□□□□ -0.3
LRTM1-202ENST00000493075 MTMR1Q13613 665 aa13.15□□□□□ -0.3
LRTM1-202ENST00000493075 HIC1Q14526 733 aa13.15□□□□□ -0.3
LRTM1-202ENST00000493075 PFKFB3Q16875 520 aaPredicted RBP13.15□□□□□ -0.3
LRTM1-202ENST00000493075 MCTP2Q6DN12 878 aa13.15□□□□□ -0.3
LRTM1-202ENST00000493075 TRAF7Q6Q0C0 670 aa13.15□□□□□ -0.3
LRTM1-202ENST00000493075 SEPT1Q8WYJ6 367 aa13.15□□□□□ -0.3
LRTM1-202ENST00000493075 MXRA8Q9BRK3 442 aa13.15□□□□□ -0.3
LRTM1-202ENST00000493075 PPP4R2Q9NY27 417 aa13.15□□□□□ -0.3
LRTM1-202ENST00000493075 YBX2Q9Y2T7 364 aaKnown RBP13.15□□□□□ -0.3
LRTM1-202ENST00000493075 NID2Q14112 1375 aa13.15□□□□□ -0.3
LRTM1-202ENST00000493075 BAZ2BQ9UIF8 2168 aaKnown RBP13.15□□□□□ -0.3
LRTM1-202ENST00000493075 KIAA1217Q5T5P2 1943 aa13.15□□□□□ -0.3
LRTM1-202ENST00000493075 COL6A3P12111 3177 aa13.15□□□□□ -0.3
LRTM1-202ENST00000493075 ABHD14A-ACY1A0A1B0GW23 586 aa13.14□□□□□ -0.31
LRTM1-202ENST00000493075 ESYT2A0FGR8 921 aa13.14□□□□□ -0.31
LRTM1-202ENST00000493075 NBNO60934 754 aa13.14□□□□□ -0.31
LRTM1-202ENST00000493075 CAND2O75155 1236 aa13.14□□□□□ -0.31
LRTM1-202ENST00000493075 SCG2P13521 617 aa13.14□□□□□ -0.31
LRTM1-202ENST00000493075 CLK2P49760 499 aaKnown RBP13.14□□□□□ -0.31
LRTM1-202ENST00000493075 ZNF618Q5T7W0 954 aa13.14□□□□□ -0.31
LRTM1-202ENST00000493075 CNKSR3Q6P9H4 555 aa13.14□□□□□ -0.31
LRTM1-202ENST00000493075 MAFAQ8NHW3 353 aaPredicted RBP13.14□□□□□ -0.31
LRTM1-202ENST00000493075 CCDC12Q8WUD4 166 aaPredicted RBP13.14□□□□□ -0.31
LRTM1-202ENST00000493075 ATP6V0A1Q93050 837 aa13.14□□□□□ -0.31
LRTM1-202ENST00000493075 TM6SF1Q9BZW5 370 aa13.14□□□□□ -0.31
LRTM1-202ENST00000493075 NKX2-4Q9H2Z4 354 aa13.14□□□□□ -0.31
LRTM1-202ENST00000493075 ZSWIM6Q9HCJ5 1215 aa13.14□□□□□ -0.31
LRTM1-202ENST00000493075 NAP1L2Q9ULW6 460 aaPredicted RBP13.14□□□□□ -0.31
LRTM1-202ENST00000493075 MYH6P13533 1939 aa13.14□□□□□ -0.31
LRTM1-202ENST00000493075 EMSYQ7Z589 1322 aa13.14□□□□□ -0.31
LRTM1-202ENST00000493075 NRCAMQ92823 1304 aa13.14□□□□□ -0.31
LRTM1-202ENST00000493075 GSTTP1A0A1W2PQM5 241 aa13.13□□□□□ -0.31
LRTM1-202ENST00000493075 RSPH10B2B2RC85 870 aa13.13□□□□□ -0.31
LRTM1-202ENST00000493075 KIF28PB7ZC32 967 aa13.13□□□□□ -0.31
LRTM1-202ENST00000493075 MEIS1O00470 390 aa13.13□□□□□ -0.31
LRTM1-202ENST00000493075 EFCAB14O75071 495 aa13.13□□□□□ -0.31
LRTM1-202ENST00000493075 RSPH10BP0C881 870 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms