RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 ATP11BQ9Y2G3 1177 aa15.88■□□□□ 0.13
CCM2-217ENST00000492883 NR2E3Q9Y5X4 410 aa15.88■□□□□ 0.13
CCM2-217ENST00000492883 IGLV3-22A0A075B6J6 115 aa15.87■□□□□ 0.13
CCM2-217ENST00000492883 K7ELQ4 463 aaPredicted RBP15.87■□□□□ 0.13
CCM2-217ENST00000492883 GJB2P29033 226 aa15.87■□□□□ 0.13
CCM2-217ENST00000492883 ITGA7Q13683 1181 aa15.87■□□□□ 0.13
CCM2-217ENST00000492883 GNL2Q13823 731 aaKnown RBP15.87■□□□□ 0.13
CCM2-217ENST00000492883 LETM2Q2VYF4 491 aa15.87■□□□□ 0.13
CCM2-217ENST00000492883 C7orf61Q8IZ16 206 aa15.87■□□□□ 0.13
CCM2-217ENST00000492883 UIMC1Q96RL1 719 aa15.87■□□□□ 0.13
CCM2-217ENST00000492883 ZNF577Q9BSK1 485 aa15.87■□□□□ 0.13
CCM2-217ENST00000492883 ARVCFO00192 962 aa15.86■□□□□ 0.13
CCM2-217ENST00000492883 EDIL3O43854 480 aa15.86■□□□□ 0.13
CCM2-217ENST00000492883 CUL4AQ13619 759 aa15.86■□□□□ 0.13
CCM2-217ENST00000492883 TRIM60Q495X7 471 aa15.86■□□□□ 0.13
CCM2-217ENST00000492883 C1orf53Q5VUE5 145 aa15.86■□□□□ 0.13
CCM2-217ENST00000492883 NEK8Q86SG6 692 aa15.86■□□□□ 0.13
CCM2-217ENST00000492883 HSCBQ8IWL3 235 aa15.86■□□□□ 0.13
CCM2-217ENST00000492883 SNX21Q969T3 373 aa15.86■□□□□ 0.13
CCM2-217ENST00000492883 GPR20Q99678 358 aa15.86■□□□□ 0.13
CCM2-217ENST00000492883 JPH1Q9HDC5 661 aaPredicted RBP15.86■□□□□ 0.13
CCM2-217ENST00000492883 KIAA0100Q14667 2235 aaKnown RBP15.86■□□□□ 0.13
CCM2-217ENST00000492883 LRRC37A2A6NM11 1700 aa15.85■□□□□ 0.13
CCM2-217ENST00000492883 CENPFP49454 3210 aa15.85■□□□□ 0.13
CCM2-217ENST00000492883 CYP3A7-CYP3A51PA0A087WV96 503 aa15.85■□□□□ 0.13
CCM2-217ENST00000492883 DCDC2CA8MYV0 355 aa15.85■□□□□ 0.13
CCM2-217ENST00000492883 H3BQV1 296 aa15.85■□□□□ 0.13
CCM2-217ENST00000492883 DDX39AO00148 427 aaKnown RBP15.85■□□□□ 0.13
CCM2-217ENST00000492883 IPO5O00410 1097 aaKnown RBP15.85■□□□□ 0.13
CCM2-217ENST00000492883 PQBP1O60828 265 aaKnown RBP15.85■□□□□ 0.13
CCM2-217ENST00000492883 TDP2O95551 362 aa15.85■□□□□ 0.13
CCM2-217ENST00000492883 CYP3A7P24462 503 aa15.85■□□□□ 0.13
CCM2-217ENST00000492883 TLE2Q04725 743 aa15.85■□□□□ 0.13
CCM2-217ENST00000492883 SNX17Q15036 470 aa15.85■□□□□ 0.13
CCM2-217ENST00000492883 EARS2Q5JPH6 523 aaKnown RBP15.85■□□□□ 0.13
CCM2-217ENST00000492883 UTP14CQ5TAP6 766 aaKnown RBP15.85■□□□□ 0.13
CCM2-217ENST00000492883 SEPT1Q8WYJ6 367 aa15.85■□□□□ 0.13
CCM2-217ENST00000492883 TNFRSF25Q93038 417 aa15.85■□□□□ 0.13
CCM2-217ENST00000492883 NAP1L4Q99733 375 aaKnown RBP15.85■□□□□ 0.13
CCM2-217ENST00000492883 SEZ6LQ9BYH1 1024 aa15.85■□□□□ 0.13
CCM2-217ENST00000492883 TBC1D22BQ9NU19 505 aa15.85■□□□□ 0.13
CCM2-217ENST00000492883 SLC9A2Q9UBY0 812 aa15.85■□□□□ 0.13
CCM2-217ENST00000492883 DDX25Q9UHL0 483 aaKnown RBP15.85■□□□□ 0.13
CCM2-217ENST00000492883 MCM3APO60318 1980 aa15.85■□□□□ 0.13
CCM2-217ENST00000492883 NFASCO94856 1347 aa15.85■□□□□ 0.13
CCM2-217ENST00000492883 FAM205CA6NFA0 338 aa15.84■□□□□ 0.13
CCM2-217ENST00000492883 CCNT1O60563 726 aaKnown RBP15.84■□□□□ 0.13
CCM2-217ENST00000492883 ZNF286BP0CG31 522 aa15.84■□□□□ 0.13
CCM2-217ENST00000492883 CDK7P50613 346 aa15.84■□□□□ 0.13
CCM2-217ENST00000492883 ITGB3BPQ13352 177 aaPredicted RBP15.84■□□□□ 0.13
CCM2-217ENST00000492883 NBPF20Q3BBV1 942 aa15.84■□□□□ 0.13
CCM2-217ENST00000492883 Q4G0T1 1027 aa15.84■□□□□ 0.13
CCM2-217ENST00000492883 FAM47CQ5HY64 1035 aa15.84■□□□□ 0.13
CCM2-217ENST00000492883 LARP1BQ659C4 914 aaKnown RBP15.84■□□□□ 0.13
CCM2-217ENST00000492883 MOXD1Q6UVY6 613 aa15.84■□□□□ 0.13
CCM2-217ENST00000492883 KATNAL1Q9BW62 490 aa15.84■□□□□ 0.13
CCM2-217ENST00000492883 FOXP1Q9H334 677 aaPredicted RBP15.84■□□□□ 0.13
CCM2-217ENST00000492883 PRKAG2Q9UGJ0 569 aa15.84■□□□□ 0.13
CCM2-217ENST00000492883 TCEAL9Q9UHQ7 104 aa15.84■□□□□ 0.13
CCM2-217ENST00000492883 TELO2Q9Y4R8 837 aa15.84■□□□□ 0.13
CCM2-217ENST00000492883 GRIN2DO15399 1336 aa15.84■□□□□ 0.13
CCM2-217ENST00000492883 MROH7Q68CQ1 1323 aa15.84■□□□□ 0.13
CCM2-217ENST00000492883 TLR3O15455 904 aaKnown RBP15.83■□□□□ 0.12
CCM2-217ENST00000492883 MARCH6O60337 910 aa15.83■□□□□ 0.12
CCM2-217ENST00000492883 LGALS2P05162 132 aa15.83■□□□□ 0.12
CCM2-217ENST00000492883 HOXD8P13378 290 aaPredicted RBP15.83■□□□□ 0.12
CCM2-217ENST00000492883 GCFC2P16383 781 aaKnown RBP15.83■□□□□ 0.12
CCM2-217ENST00000492883 TCF7P36402 384 aaPredicted RBP15.83■□□□□ 0.12
CCM2-217ENST00000492883 PSEN2P49810 448 aa15.83■□□□□ 0.12
CCM2-217ENST00000492883 MFSD10Q14728 455 aa15.83■□□□□ 0.12
CCM2-217ENST00000492883 MCTP1Q6DN14 999 aa15.83■□□□□ 0.12
CCM2-217ENST00000492883 PPP4R3AQ6IN85 833 aa15.83■□□□□ 0.12
CCM2-217ENST00000492883 ANKRD33Q7Z3H0 272 aa15.83■□□□□ 0.12
CCM2-217ENST00000492883 PPP1R13LQ8WUF5 828 aa15.83■□□□□ 0.12
CCM2-217ENST00000492883 KAT2BQ92831 832 aa15.83■□□□□ 0.12
CCM2-217ENST00000492883 LENG9Q96B70 501 aa15.83■□□□□ 0.12
CCM2-217ENST00000492883 TOX2Q96NM4 488 aa15.83■□□□□ 0.12
CCM2-217ENST00000492883 PRDM5Q9NQX1 630 aaPredicted RBP15.83■□□□□ 0.12
CCM2-217ENST00000492883 FOXD4L1Q9NU39 408 aa15.83■□□□□ 0.12
CCM2-217ENST00000492883 GSTTP1A0A1W2PQM5 241 aa15.82■□□□□ 0.12
CCM2-217ENST00000492883 H3BRB1 525 aa15.82■□□□□ 0.12
CCM2-217ENST00000492883 MSH4O15457 936 aa15.82■□□□□ 0.12
CCM2-217ENST00000492883 DHX15O43143 795 aaKnown RBP15.82■□□□□ 0.12
CCM2-217ENST00000492883 F2P00734 622 aa15.82■□□□□ 0.12
CCM2-217ENST00000492883 HSP90AA1P07900 732 aaKnown RBP15.82■□□□□ 0.12
CCM2-217ENST00000492883 ATP2B1P20020 1258 aa15.82■□□□□ 0.12
CCM2-217ENST00000492883 ACTR2P61160 394 aa15.82■□□□□ 0.12
CCM2-217ENST00000492883 KIAA0753Q2KHM9 967 aa15.82■□□□□ 0.12
CCM2-217ENST00000492883 NFRKBQ6P4R8 1299 aa15.82■□□□□ 0.12
CCM2-217ENST00000492883 C7orf31Q8N865 590 aa15.82■□□□□ 0.12
CCM2-217ENST00000492883 SLC43A3Q8NBI5 491 aa15.82■□□□□ 0.12
CCM2-217ENST00000492883 GLG1Q92896 1179 aa15.82■□□□□ 0.12
CCM2-217ENST00000492883 INTS4Q96HW7 963 aaKnown RBP15.82■□□□□ 0.12
CCM2-217ENST00000492883 MBOAT7Q96N66 472 aa15.82■□□□□ 0.12
CCM2-217ENST00000492883 C16orf70Q9BSU1 422 aa15.82■□□□□ 0.12
CCM2-217ENST00000492883 TUT1Q9H6E5 874 aaKnown RBP15.82■□□□□ 0.12
CCM2-217ENST00000492883 TMEM39AQ9NV64 488 aa15.82■□□□□ 0.12
CCM2-217ENST00000492883 ZNF215Q9UL58 517 aaPredicted RBP15.82■□□□□ 0.12
CCM2-217ENST00000492883 ZMYND8Q9ULU4 1186 aaPredicted RBP15.82■□□□□ 0.12
CCM2-217ENST00000492883 H0YGN5 161 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms