RNA–Protein interactions for RNA: ENST00000492622.6

FNDC3A-204, Transcript of fibronectin type III domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3A, Length 6,286 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-204ENST00000492622 ATP5OP48047 213 aa9.38□□□□□ -0.91
FNDC3A-204ENST00000492622 EPHB4P54760 987 aa9.38□□□□□ -0.91
FNDC3A-204ENST00000492622 GRIN1Q05586 938 aa9.38□□□□□ -0.91
FNDC3A-204ENST00000492622 TMEM47Q9BQJ4 181 aa9.38□□□□□ -0.91
FNDC3A-204ENST00000492622 HEMGNQ9BXL5 484 aa9.38□□□□□ -0.91
FNDC3A-204ENST00000492622 HOMER3Q9NSC5 361 aa9.38□□□□□ -0.91
FNDC3A-204ENST00000492622 MRPL11Q9Y3B7 192 aaKnown RBP9.38□□□□□ -0.91
FNDC3A-204ENST00000492622 IVNS1ABPQ9Y6Y0 642 aa9.38□□□□□ -0.91
FNDC3A-204ENST00000492622 GSG1L2A8MUP6 293 aa9.38□□□□□ -0.91
FNDC3A-204ENST00000492622 MYO1FO00160 1098 aa9.38□□□□□ -0.91
FNDC3A-204ENST00000492622 MARK3P27448 753 aa9.38□□□□□ -0.91
FNDC3A-204ENST00000492622 CDC37Q16543 378 aaPredicted RBP9.38□□□□□ -0.91
FNDC3A-204ENST00000492622 SGO2Q562F6 1265 aa9.38□□□□□ -0.91
FNDC3A-204ENST00000492622 PASD1Q8IV76 773 aa9.38□□□□□ -0.91
FNDC3A-204ENST00000492622 SULF1Q8IWU6 871 aa9.38□□□□□ -0.91
FNDC3A-204ENST00000492622 ZNF609O15014 1411 aa9.38□□□□□ -0.91
FNDC3A-204ENST00000492622 CPSF1Q10570 1443 aaKnown RBP9.38□□□□□ -0.91
FNDC3A-204ENST00000492622 POTEB3A0JP26 581 aa9.38□□□□□ -0.91
FNDC3A-204ENST00000492622 POTECB2RU33 542 aa9.38□□□□□ -0.91
FNDC3A-204ENST00000492622 F5H423 210 aaPredicted RBP9.38□□□□□ -0.91
FNDC3A-204ENST00000492622 SLC8A3P57103 927 aa9.38□□□□□ -0.91
FNDC3A-204ENST00000492622 GABPAQ06546 454 aa9.38□□□□□ -0.91
FNDC3A-204ENST00000492622 MUM1Q2TAK8 710 aa9.38□□□□□ -0.91
FNDC3A-204ENST00000492622 POTEBQ6S5H4 581 aa9.38□□□□□ -0.91
FNDC3A-204ENST00000492622 LMNTD2Q8IXW0 634 aa9.38□□□□□ -0.91
FNDC3A-204ENST00000492622 PANX2Q96RD6 677 aa9.38□□□□□ -0.91
FNDC3A-204ENST00000492622 FEZ2Q9UHY8 353 aaPredicted RBP9.38□□□□□ -0.91
FNDC3A-204ENST00000492622 SCAF8Q9UPN6 1271 aaKnown RBP9.38□□□□□ -0.91
FNDC3A-204ENST00000492622 PGRMC1O00264 195 aaKnown RBP9.38□□□□□ -0.91
FNDC3A-204ENST00000492622 PSMC2P35998 433 aaKnown RBP9.38□□□□□ -0.91
FNDC3A-204ENST00000492622 TRAPPC10P48553 1259 aa9.38□□□□□ -0.91
FNDC3A-204ENST00000492622 MTERF2Q49AM1 385 aa9.38□□□□□ -0.91
FNDC3A-204ENST00000492622 FAM47CQ5HY64 1035 aa9.38□□□□□ -0.91
FNDC3A-204ENST00000492622 ATG9AQ7Z3C6 839 aa9.38□□□□□ -0.91
FNDC3A-204ENST00000492622 RNF10Q8N5U6 811 aaKnown RBP9.38□□□□□ -0.91
FNDC3A-204ENST00000492622 LBHD1Q9BQE6 289 aaPredicted RBP9.38□□□□□ -0.91
FNDC3A-204ENST00000492622 JPH2Q9BR39 696 aaPredicted RBP9.38□□□□□ -0.91
FNDC3A-204ENST00000492622 RIC8AQ9NPQ8 531 aa9.38□□□□□ -0.91
FNDC3A-204ENST00000492622 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.38□□□□□ -0.914e-7■■□□□ 13
FNDC3A-204ENST00000492622 SNX24Q9Y343 169 aa9.38□□□□□ -0.91
FNDC3A-204ENST00000492622 PREX2Q70Z35 1606 aa9.38□□□□□ -0.91
FNDC3A-204ENST00000492622 NPHP3-ACAD11A0A0J9YXS1 232 aa9.38□□□□□ -0.91
FNDC3A-204ENST00000492622 FGGP02679 453 aa9.38□□□□□ -0.91
FNDC3A-204ENST00000492622 ATP1A1P05023 1023 aaKnown RBP9.38□□□□□ -0.91
FNDC3A-204ENST00000492622 TMEM191BP0C7N4 346 aa9.38□□□□□ -0.91
FNDC3A-204ENST00000492622 HMGB2P26583 209 aaKnown RBP9.38□□□□□ -0.91
FNDC3A-204ENST00000492622 ERFP50548 548 aa9.38□□□□□ -0.91
FNDC3A-204ENST00000492622 MKRN3Q13064 507 aaKnown RBP9.38□□□□□ -0.91
FNDC3A-204ENST00000492622 SARM1Q6SZW1 724 aa9.38□□□□□ -0.91
FNDC3A-204ENST00000492622 SPATA24Q86W54 205 aa9.38□□□□□ -0.91
FNDC3A-204ENST00000492622 NME8Q8N427 588 aa9.38□□□□□ -0.91
FNDC3A-204ENST00000492622 SUPT20HQ8NEM7 779 aa9.38□□□□□ -0.91
FNDC3A-204ENST00000492622 RIN2Q8WYP3 895 aaPredicted RBP9.38□□□□□ -0.91
FNDC3A-204ENST00000492622 AK9Q5TCS8 1911 aa9.37□□□□□ -0.91
FNDC3A-204ENST00000492622 USP17L10C9JJH3 530 aa9.37□□□□□ -0.91
FNDC3A-204ENST00000492622 TDP2O95551 362 aa9.37□□□□□ -0.91
FNDC3A-204ENST00000492622 ALKBH5Q6P6C2 394 aaKnown RBP9.37□□□□□ -0.91
FNDC3A-204ENST00000492622 LRRC43Q8N309 656 aa9.37□□□□□ -0.91
FNDC3A-204ENST00000492622 BANK1Q8NDB2 785 aa9.37□□□□□ -0.91
FNDC3A-204ENST00000492622 METTL14Q9HCE5 456 aaKnown RBP9.37□□□□□ -0.91
FNDC3A-204ENST00000492622 MINPP1Q9UNW1 487 aa9.37□□□□□ -0.91
FNDC3A-204ENST00000492622 JRKLQ9Y4A0 524 aa9.37□□□□□ -0.91
FNDC3A-204ENST00000492622 POTEFA5A3E0 1075 aa9.37□□□□□ -0.91
FNDC3A-204ENST00000492622 POTEIP0CG38 1075 aa9.37□□□□□ -0.91
FNDC3A-204ENST00000492622 E4F1Q66K89 784 aaPredicted RBP9.37□□□□□ -0.91
FNDC3A-204ENST00000492622 GALNT17Q6IS24 598 aa9.37□□□□□ -0.91
FNDC3A-204ENST00000492622 ZNF449Q6P9G9 518 aa9.37□□□□□ -0.91
FNDC3A-204ENST00000492622 POTEGQ6S5H5 508 aa9.37□□□□□ -0.91
FNDC3A-204ENST00000492622 POTEEQ6S8J3 1075 aa9.37□□□□□ -0.91
FNDC3A-204ENST00000492622 CEP170P1Q96L14 293 aa9.37□□□□□ -0.91
FNDC3A-204ENST00000492622 MAP3K4Q9Y6R4 1608 aa9.37□□□□□ -0.91
FNDC3A-204ENST00000492622 TFAMQ00059 246 aaKnown RBP9.37□□□□□ -0.91
FNDC3A-204ENST00000492622 ASPRV1Q53RT3 343 aa9.37□□□□□ -0.91
FNDC3A-204ENST00000492622 CFAP61Q8NHU2 1237 aa9.37□□□□□ -0.91
FNDC3A-204ENST00000492622 CEP95Q96GE4 821 aa9.37□□□□□ -0.91
FNDC3A-204ENST00000492622 MED10Q9BTT4 135 aa9.37□□□□□ -0.91
FNDC3A-204ENST00000492622 FIS1Q9Y3D6 152 aa9.37□□□□□ -0.91
FNDC3A-204ENST00000492622 CDC42BPAQ5VT25 1732 aa9.37□□□□□ -0.91
FNDC3A-204ENST00000492622 ZNF335Q9H4Z2 1342 aaPredicted RBP9.37□□□□□ -0.91
FNDC3A-204ENST00000492622 STAG1Q8WVM7 1258 aa9.37□□□□□ -0.91
FNDC3A-204ENST00000492622 NT5C1BQ96P26 610 aa9.37□□□□□ -0.91
FNDC3A-204ENST00000492622 PLAAQ9Y263 795 aa9.37□□□□□ -0.91
FNDC3A-204ENST00000492622 PASKQ96RG2 1323 aa9.37□□□□□ -0.91
FNDC3A-204ENST00000492622 INO80B-WBP1J3KQ70 363 aa9.36□□□□□ -0.91
FNDC3A-204ENST00000492622 NR1D1P20393 614 aa9.36□□□□□ -0.91
FNDC3A-204ENST00000492622 SNX16P57768 344 aa9.36□□□□□ -0.91
FNDC3A-204ENST00000492622 C10orf76Q5T2E6 689 aa9.36□□□□□ -0.91
FNDC3A-204ENST00000492622 TBC1D9BQ66K14 1250 aa9.36□□□□□ -0.91
FNDC3A-204ENST00000492622 SFR1Q86XK3 245 aa9.36□□□□□ -0.91
FNDC3A-204ENST00000492622 MS4A14Q96JA4 679 aa9.36□□□□□ -0.91
FNDC3A-204ENST00000492622 INO80BQ9C086 356 aaPredicted RBP9.36□□□□□ -0.91
FNDC3A-204ENST00000492622 PARP2Q9UGN5 583 aa9.36□□□□□ -0.91
FNDC3A-204ENST00000492622 FNDC3AQ9Y2H6 1198 aaKnown RBP9.36□□□□□ -0.91
FNDC3A-204ENST00000492622 ADGRG1Q9Y653 693 aa9.36□□□□□ -0.91
FNDC3A-204ENST00000492622 GOLGA8MH3BSY2 632 aa9.36□□□□□ -0.91
FNDC3A-204ENST00000492622 GH2P01242 217 aa9.36□□□□□ -0.91
FNDC3A-204ENST00000492622 TROVE2P10155 538 aaKnown RBP eCLIP9.36□□□□□ -0.912e-8■■■■■ 207.4
FNDC3A-204ENST00000492622 BMP3P12645 472 aa9.36□□□□□ -0.91
FNDC3A-204ENST00000492622 GCKP35557 465 aa9.36□□□□□ -0.91
FNDC3A-204ENST00000492622 RFX6Q8HWS3 928 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms