RNA–Protein interactions for RNA: ENST00000492571.1

TNFRSF9-203, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-203ENST00000492571 MRPL38Q96DV4 380 aaKnown RBP11.4□□□□□ -0.58
TNFRSF9-203ENST00000492571 YME1L1Q96TA2 773 aa11.4□□□□□ -0.58
TNFRSF9-203ENST00000492571 ALG1Q9BT22 464 aa11.4□□□□□ -0.58
TNFRSF9-203ENST00000492571 TCP11L1Q9NUJ3 509 aa11.4□□□□□ -0.58
TNFRSF9-203ENST00000492571 HDAC6Q9UBN7 1215 aa11.4□□□□□ -0.58
TNFRSF9-203ENST00000492571 REV3LO60673 3130 aa11.4□□□□□ -0.58
TNFRSF9-203ENST00000492571 NBNO60934 754 aa11.39□□□□□ -0.59
TNFRSF9-203ENST00000492571 EIF3JO75822 258 aaKnown RBP11.39□□□□□ -0.59
TNFRSF9-203ENST00000492571 ARIH2O95376 493 aa11.39□□□□□ -0.59
TNFRSF9-203ENST00000492571 PCP11498 1178 aaKnown RBP11.39□□□□□ -0.59
TNFRSF9-203ENST00000492571 IL9P15248 144 aa11.39□□□□□ -0.59
TNFRSF9-203ENST00000492571 ZNF543Q08ER8 600 aa11.39□□□□□ -0.59
TNFRSF9-203ENST00000492571 PTGDRQ13258 359 aa11.39□□□□□ -0.59
TNFRSF9-203ENST00000492571 KIAA0753Q2KHM9 967 aa11.39□□□□□ -0.59
TNFRSF9-203ENST00000492571 CCDC62Q6P9F0 684 aa11.39□□□□□ -0.59
TNFRSF9-203ENST00000492571 MFSD6Q6ZSS7 791 aa11.39□□□□□ -0.59
TNFRSF9-203ENST00000492571 RASGRP2Q7LDG7 609 aa11.39□□□□□ -0.59
TNFRSF9-203ENST00000492571 SPRED2Q7Z698 418 aa11.39□□□□□ -0.59
TNFRSF9-203ENST00000492571 BANK1Q8NDB2 785 aa11.39□□□□□ -0.59
TNFRSF9-203ENST00000492571 MFSD14AQ96MC6 490 aa11.39□□□□□ -0.59
TNFRSF9-203ENST00000492571 RMDN3Q96TC7 470 aa11.39□□□□□ -0.59
TNFRSF9-203ENST00000492571 PRKAG3Q9UGI9 489 aa11.39□□□□□ -0.59
TNFRSF9-203ENST00000492571 RCAN3Q9UKA8 241 aa11.39□□□□□ -0.59
TNFRSF9-203ENST00000492571 MRVI1Q9Y6F6 885 aa11.39□□□□□ -0.59
TNFRSF9-203ENST00000492571 PIEZO1Q92508 2521 aa11.39□□□□□ -0.59
TNFRSF9-203ENST00000492571 MYH4Q9Y623 1939 aa11.39□□□□□ -0.59
TNFRSF9-203ENST00000492571 ABCB11O95342 1321 aa11.38□□□□□ -0.59
TNFRSF9-203ENST00000492571 RSPH10B2B2RC85 870 aa11.38□□□□□ -0.59
TNFRSF9-203ENST00000492571 H3BQ06 376 aaPredicted RBP11.38□□□□□ -0.59
TNFRSF9-203ENST00000492571 DHX16O60231 1041 aaKnown RBP11.38□□□□□ -0.59
TNFRSF9-203ENST00000492571 PPFIA4O75335 1185 aa11.38□□□□□ -0.59
TNFRSF9-203ENST00000492571 RSPH10BP0C881 870 aa11.38□□□□□ -0.59
TNFRSF9-203ENST00000492571 THPOP40225 353 aa11.38□□□□□ -0.59
TNFRSF9-203ENST00000492571 GPNMBQ14956 572 aa11.38□□□□□ -0.59
TNFRSF9-203ENST00000492571 ALX1Q15699 326 aa11.38□□□□□ -0.59
TNFRSF9-203ENST00000492571 CCDC178Q5BJE1 867 aa11.38□□□□□ -0.59
TNFRSF9-203ENST00000492571 ZNF618Q5T7W0 954 aa11.38□□□□□ -0.59
TNFRSF9-203ENST00000492571 KCNV1Q6PIU1 500 aa11.38□□□□□ -0.59
TNFRSF9-203ENST00000492571 PPTC7Q8NI37 304 aa11.38□□□□□ -0.59
TNFRSF9-203ENST00000492571 ZNF516Q92618 1163 aa11.38□□□□□ -0.59
TNFRSF9-203ENST00000492571 KAT2BQ92831 832 aa11.38□□□□□ -0.59
TNFRSF9-203ENST00000492571 C17orf80Q9BSJ5 609 aa11.38□□□□□ -0.59
TNFRSF9-203ENST00000492571 RNF41Q9H4P4 317 aaPredicted RBP11.38□□□□□ -0.59
TNFRSF9-203ENST00000492571 HELLSQ9NRZ9 838 aa11.38□□□□□ -0.59
TNFRSF9-203ENST00000492571 MRPL11Q9Y3B7 192 aaKnown RBP11.38□□□□□ -0.59
TNFRSF9-203ENST00000492571 FGRP09769 529 aa11.37□□□□□ -0.59
TNFRSF9-203ENST00000492571 MX1P20591 662 aa11.37□□□□□ -0.59
TNFRSF9-203ENST00000492571 ARHGAP1Q07960 439 aa11.37□□□□□ -0.59
TNFRSF9-203ENST00000492571 GPM6BQ13491 265 aa11.37□□□□□ -0.59
TNFRSF9-203ENST00000492571 EPC2Q52LR7 807 aa11.37□□□□□ -0.59
TNFRSF9-203ENST00000492571 DBF4BQ8NFT6 615 aa11.37□□□□□ -0.59
TNFRSF9-203ENST00000492571 NEK9Q8TD19 979 aa11.37□□□□□ -0.59
TNFRSF9-203ENST00000492571 SEPT8Q92599 483 aa11.37□□□□□ -0.59
TNFRSF9-203ENST00000492571 DHX38Q92620 1227 aaKnown RBP11.37□□□□□ -0.59
TNFRSF9-203ENST00000492571 ESR2Q92731 530 aa11.37□□□□□ -0.59
TNFRSF9-203ENST00000492571 EMID1Q96A84 441 aaPredicted RBP11.37□□□□□ -0.59
TNFRSF9-203ENST00000492571 EVI5LQ96CN4 794 aa11.37□□□□□ -0.59
TNFRSF9-203ENST00000492571 PABPC5Q96DU9 382 aaKnown RBP11.37□□□□□ -0.59
TNFRSF9-203ENST00000492571 TAAR1Q96RJ0 339 aa11.37□□□□□ -0.59
TNFRSF9-203ENST00000492571 POP1Q99575 1024 aaKnown RBP11.37□□□□□ -0.59
TNFRSF9-203ENST00000492571 NSUN3Q9H649 340 aaKnown RBP11.37□□□□□ -0.59
TNFRSF9-203ENST00000492571 DDX41Q9UJV9 622 aaKnown RBP11.37□□□□□ -0.59
TNFRSF9-203ENST00000492571 GBF1Q92538 1859 aa11.37□□□□□ -0.59
TNFRSF9-203ENST00000492571 LRRC37A2A6NM11 1700 aa11.37□□□□□ -0.59
TNFRSF9-203ENST00000492571 H3BNC9 293 aa11.36□□□□□ -0.59
TNFRSF9-203ENST00000492571 UPP2O95045 317 aa11.36□□□□□ -0.59
TNFRSF9-203ENST00000492571 F2P00734 622 aa11.36□□□□□ -0.59
TNFRSF9-203ENST00000492571 FGAP02671 866 aa11.36□□□□□ -0.59
TNFRSF9-203ENST00000492571 HSPD1P10809 573 aaKnown RBP11.36□□□□□ -0.59
TNFRSF9-203ENST00000492571 GNAT1P11488 350 aa11.36□□□□□ -0.59
TNFRSF9-203ENST00000492571 NT5C2P49902 561 aa11.36□□□□□ -0.59
TNFRSF9-203ENST00000492571 HTRA4P83105 476 aaPredicted RBP11.36□□□□□ -0.59
TNFRSF9-203ENST00000492571 NHLH1Q02575 133 aa11.36□□□□□ -0.59
TNFRSF9-203ENST00000492571 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.36□□□□□ -0.59
TNFRSF9-203ENST00000492571 IQCA1Q86XH1 822 aa11.36□□□□□ -0.59
TNFRSF9-203ENST00000492571 PI4K2BQ8TCG2 481 aa11.36□□□□□ -0.59
TNFRSF9-203ENST00000492571 SYTL5Q8TDW5 730 aaPredicted RBP11.36□□□□□ -0.59
TNFRSF9-203ENST00000492571 SPATA33Q96N06 139 aa11.36□□□□□ -0.59
TNFRSF9-203ENST00000492571 UBA5Q9GZZ9 404 aa11.36□□□□□ -0.59
TNFRSF9-203ENST00000492571 KAT14Q9H8E8 782 aa11.36□□□□□ -0.59
TNFRSF9-203ENST00000492571 IL21Q9HBE4 155 aa11.36□□□□□ -0.59
TNFRSF9-203ENST00000492571 CLDND1Q9NY35 253 aa11.36□□□□□ -0.59
TNFRSF9-203ENST00000492571 MUC6Q6W4X9 2439 aa11.35□□□□□ -0.59
TNFRSF9-203ENST00000492571 C17orf102A2RUQ5 167 aa11.35□□□□□ -0.59
TNFRSF9-203ENST00000492571 CFBP00751 764 aa11.35□□□□□ -0.59
TNFRSF9-203ENST00000492571 NR3C2P08235 984 aa11.35□□□□□ -0.59
TNFRSF9-203ENST00000492571 ZNF286BP0CG31 522 aa11.35□□□□□ -0.59
TNFRSF9-203ENST00000492571 GOLGA8HP0CJ92 632 aa11.35□□□□□ -0.59
TNFRSF9-203ENST00000492571 SNHG28P0DPA3 235 aa11.35□□□□□ -0.59
TNFRSF9-203ENST00000492571 EIF2AK2P19525 551 aaKnown RBP11.35□□□□□ -0.59
TNFRSF9-203ENST00000492571 MFAP1P55081 439 aaKnown RBP11.35□□□□□ -0.59
TNFRSF9-203ENST00000492571 CDC37Q16543 378 aaPredicted RBP11.35□□□□□ -0.59
TNFRSF9-203ENST00000492571 MCMDC2Q4G0Z9 681 aa11.35□□□□□ -0.59
TNFRSF9-203ENST00000492571 VPS53Q5VIR6 699 aa11.35□□□□□ -0.59
TNFRSF9-203ENST00000492571 FBXO11Q86XK2 927 aa11.35□□□□□ -0.59
TNFRSF9-203ENST00000492571 DGKHQ86XP1 1220 aa11.35□□□□□ -0.59
TNFRSF9-203ENST00000492571 ADHFE1Q8IWW8 467 aa11.35□□□□□ -0.59
TNFRSF9-203ENST00000492571 TMEM192Q8IY95 271 aa11.35□□□□□ -0.59
TNFRSF9-203ENST00000492571 ATP6V0A1Q93050 837 aa11.35□□□□□ -0.59
TNFRSF9-203ENST00000492571 TOP1MTQ969P6 601 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms